BLASTX nr result

ID: Cinnamomum25_contig00015809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00015809
         (590 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010274071.1| PREDICTED: myb-like protein X [Nelumbo nucif...    79   2e-12
ref|XP_010650330.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    73   1e-10
ref|XP_007034235.1| Electron transport complex protein rnfC, put...    71   3e-10
ref|XP_007034233.1| Electron transport complex protein rnfC, put...    71   3e-10
ref|XP_010274072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    65   3e-08

>ref|XP_010274071.1| PREDICTED: myb-like protein X [Nelumbo nucifera]
          Length = 490

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
 Frame = -3

Query: 582 ELGRRIRDEATGNGCQLAQNFPVTTDQRRNEGFSRLMGQT-EKRTEGKDKKKDENKHRDY 406
           EL RRIRDE  G G Q+ +NF   T  R+ E  SRL+ ++ E R +GK+K KD  K  D 
Sbjct: 124 ELDRRIRDEEKGTGNQMVENF-TGTGHRKAEIMSRLVEKSMEYRVQGKEKNKD--KKGDD 180

Query: 405 TSAEKQSDKDKWRGTSDKMVRNINGTDQKRIGGSI-PTEKEAEKRIXXXXXXXXXXXVDR 229
              + Q +KD+ +G  + M+++    DQ+R+   + P EK+ EKR+            DR
Sbjct: 181 RRTDGQRNKDEEKGMGNAMLQSSTRMDQRRVEEVVRPMEKDTEKRVEGKEKNKDKEGNDR 240

Query: 228 RGERH----------NKNRELEEMRSKGTXXXXXXXXXXXXXXXXXXXXKYDKDQNKFRE 79
           R ++H           KN+E E+ + KG                        KD+N+ R 
Sbjct: 241 RKDKHKEKDREKKSKGKNKEKEKEKEKG------------------------KDKNEHRL 276

Query: 78  NGRENGRMEHTGK----TLNIKSSFPPKDS 1
           N ++  R E + K    T N+K+   PKD+
Sbjct: 277 NEQDKSR-ESSKKDPVVTPNVKTLHLPKDN 305


>ref|XP_010650330.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
           gi|298205228|emb|CBI17287.3| unnamed protein product
           [Vitis vinifera]
          Length = 524

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 2/195 (1%)
 Frame = -3

Query: 582 ELGRRIRDEATGNGCQLAQNFPVTTDQRRNEGFSRLMGQ-TEKRTEGKDKKKDENKHRDY 406
           ELGRRIR E  GNG QL + F   TD+R++E  +RL+ +    RTEGK+K KD  K  + 
Sbjct: 156 ELGRRIRAEDGGNGNQLVEKF-TGTDRRKDEAMARLVAKDVGIRTEGKEKNKD--KRGED 212

Query: 405 TSAEKQSDKDKWRGTSDKMVRNINGTDQKRIGGS-IPTEKEAEKRIXXXXXXXXXXXVDR 229
              + Q  +D+ R + + + +++ GT   R+ G+  P EK+ E+R+            D+
Sbjct: 213 RKIDGQGVRDESRISGNSVAQSLTGTGLHRLEGTPKPLEKKIERRMEAKEKTKDKEGDDK 272

Query: 228 RGERHNKNRELEEMRSKGTXXXXXXXXXXXXXXXXXXXXKYDKDQNKFRENGRENGRMEH 49
           RG++  K+R+  E +S+G                       D+D+ K R+  +E  ++EH
Sbjct: 273 RGDK-RKDRD-REKKSQGKEK--------------------DRDKEK-RKEEKEKEKIEH 309

Query: 48  TGKTLNIKSSFPPKD 4
             K L+ KS    KD
Sbjct: 310 KNKELD-KSKESNKD 323


>ref|XP_007034235.1| Electron transport complex protein rnfC, putative isoform 3
           [Theobroma cacao] gi|508713264|gb|EOY05161.1| Electron
           transport complex protein rnfC, putative isoform 3
           [Theobroma cacao]
          Length = 526

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
 Frame = -3

Query: 582 ELGRRIRDEATGNGCQLAQNFPVTTDQRRNEGFSRLMGQTEKRTEGKDKKKDENKHRDYT 403
           ELGRR+RDE  G G QLA  F + TDQ+R+EG  RL+ +T    E K+K    +K  D  
Sbjct: 160 ELGRRVRDEGAGTGNQLADRF-MGTDQKRDEGMVRLVAKTANILEEKEK----SKRSDDR 214

Query: 402 SAEKQSDKDKWRGTSDKMVRNINGTDQKRIGGSIP--TEKEAEKRIXXXXXXXXXXXVDR 229
             + Q  +++ R + + MV+N+ G  + R+ G IP   EK+ E+R+            D+
Sbjct: 215 KLDVQGIREETRSSGNAMVQNLPGAAKARVEG-IPRQVEKDTERRMEGKEKTKEKQSDDK 273

Query: 228 -RGERHNKNRE 199
            R +R +K+RE
Sbjct: 274 IRDKRKDKDRE 284


>ref|XP_007034233.1| Electron transport complex protein rnfC, putative isoform 1
           [Theobroma cacao] gi|590656311|ref|XP_007034234.1|
           Electron transport complex protein rnfC, putative
           isoform 1 [Theobroma cacao] gi|508713262|gb|EOY05159.1|
           Electron transport complex protein rnfC, putative
           isoform 1 [Theobroma cacao] gi|508713263|gb|EOY05160.1|
           Electron transport complex protein rnfC, putative
           isoform 1 [Theobroma cacao]
          Length = 539

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
 Frame = -3

Query: 582 ELGRRIRDEATGNGCQLAQNFPVTTDQRRNEGFSRLMGQTEKRTEGKDKKKDENKHRDYT 403
           ELGRR+RDE  G G QLA  F + TDQ+R+EG  RL+ +T    E K+K    +K  D  
Sbjct: 173 ELGRRVRDEGAGTGNQLADRF-MGTDQKRDEGMVRLVAKTANILEEKEK----SKRSDDR 227

Query: 402 SAEKQSDKDKWRGTSDKMVRNINGTDQKRIGGSIP--TEKEAEKRIXXXXXXXXXXXVDR 229
             + Q  +++ R + + MV+N+ G  + R+ G IP   EK+ E+R+            D+
Sbjct: 228 KLDVQGIREETRSSGNAMVQNLPGAAKARVEG-IPRQVEKDTERRMEGKEKTKEKQSDDK 286

Query: 228 -RGERHNKNRE 199
            R +R +K+RE
Sbjct: 287 IRDKRKDKDRE 297


>ref|XP_010274072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Nelumbo
           nucifera] gi|720057769|ref|XP_010274073.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 42-like [Nelumbo
           nucifera]
          Length = 482

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
 Frame = -3

Query: 582 ELGRRIRDEATGNGCQLAQNFPVTTDQRRNEGFSRLMGQ-TEKRTEGKDKKKDENKHRDY 406
           ELGRRIR E  G G Q+ +NF   TD R+ E   RL+ +  E   +GK+  KD  K  D 
Sbjct: 120 ELGRRIRYEDKGTGNQMVENF-TGTDHRKAEFMCRLVEKGMENSVQGKENNKD--KKSDD 176

Query: 405 TSAEKQSDKDKWRGTSDKMVRNINGTDQKRIGGSI-PTEKEAEKRIXXXXXXXXXXXVDR 229
             A+ Q +KD+ +G  + M+++    DQ+    +  P EK+ EKR+            D+
Sbjct: 177 RRADGQRNKDEEKGMGNAMLQSSTKMDQRTAEKTARPMEKDTEKRM-----EGKEKNKDK 231

Query: 228 RGERHNKNRELE-EMRSKGTXXXXXXXXXXXXXXXXXXXXKYDKDQNKFRENG--RENGR 58
              R +K++E + E + KG                       DK++ K +E    RE  +
Sbjct: 232 ENRRKDKHKEKDREKKGKGKDKNR------------------DKEKEKVKEKSELREQDK 273

Query: 57  MEHTGK-----TLNIKSSFPPKDS 1
              + K     T N+K+   PKD+
Sbjct: 274 YRESSKKDPVDTPNVKTFHLPKDN 297


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