BLASTX nr result
ID: Cinnamomum25_contig00013843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00013843
(1439 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010905232.1| PREDICTED: tRNA pseudouridine synthase A, mi... 387 e-104
ref|XP_008813054.1| PREDICTED: tRNA pseudouridine synthase A, mi... 385 e-104
ref|XP_011099813.1| PREDICTED: tRNA pseudouridine synthase A, mi... 383 e-103
ref|XP_010101290.1| tRNA pseudouridine synthase A [Morus notabil... 374 e-101
gb|KHG11186.1| tRNA pseudouridine synthase A, mitochondrial [Gos... 371 e-100
ref|XP_010664099.1| PREDICTED: tRNA pseudouridine synthase A, mi... 365 4e-98
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera] 365 4e-98
ref|XP_012451661.1| PREDICTED: tRNA pseudouridine synthase A, mi... 365 5e-98
ref|XP_008350479.1| PREDICTED: tRNA pseudouridine synthase A, mi... 363 2e-97
ref|XP_012829550.1| PREDICTED: tRNA pseudouridine synthase A, mi... 360 1e-96
ref|XP_009384007.1| PREDICTED: tRNA pseudouridine synthase A, mi... 359 3e-96
ref|XP_009334443.1| PREDICTED: tRNA pseudouridine synthase A, mi... 359 3e-96
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ... 350 1e-93
ref|XP_010266941.1| PREDICTED: tRNA pseudouridine synthase A, mi... 350 2e-93
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 346 3e-92
ref|XP_006828885.1| PREDICTED: tRNA pseudouridine synthase A, mi... 344 9e-92
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 342 3e-91
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi... 342 4e-91
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 342 4e-91
gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja] 340 2e-90
>ref|XP_010905232.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Elaeis
guineensis]
Length = 569
Score = 387 bits (993), Expect = e-104
Identities = 214/439 (48%), Positives = 271/439 (61%)
Frame = -3
Query: 1431 HRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVETG 1252
H DRE+VIAS GSGNEL +CLECSERGRKV G+MGR P G
Sbjct: 162 HPDREAVIASMGSGNELARCLECSERGRKVPGLMGRE-----------------PRTSGG 204
Query: 1251 SKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDATL 1072
+ L GG + S + V+ G + + + +
Sbjct: 205 EERNDLDSGGVGGE--DDSASNLNSETRVSTGCIGEDSNKANKAGNGEFESNKVQKSELG 262
Query: 1071 NEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSGRK 892
G+ GG + ++ + +D E KN +E +++ A++
Sbjct: 263 GSSAGGEHGGAS--------------DLNVKDETD----EAKNGEIESGVDDGSAANSIL 304
Query: 891 GGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMGAFQ 712
+V + + + K G ++ V D + + S EEK +TG + +G+ M +
Sbjct: 305 DS--IVDSGASKVEECNKLGNVDFVVEDKTIVETLVSMEEKGVETGVGDNTNGKQMAVRK 362
Query: 711 GGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSIDGME 532
G F YG++ERERFN ILK YVGTHNFHNFTTRTKAEDPSARRYI+SF+AD VVSI+G++
Sbjct: 363 SG-FSYGDEERERFNRILKHYVGTHNFHNFTTRTKAEDPSARRYIISFSADRVVSIEGID 421
Query: 531 FVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLYLDE 352
FVRCEV+GQSFMLHQIRK+IGLAVAVMRNCAPE+L++TAL+K+VN+NVPTAPEVGLYLDE
Sbjct: 422 FVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLMDTALRKEVNINVPTAPEVGLYLDE 481
Query: 351 CFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNHRNY 172
C FTSYNQKWKDSHEE+SM+ Y EEAE+FKM YIY+HIASME KEG V +WLHSLN+RNY
Sbjct: 482 CLFTSYNQKWKDSHEELSMKAYAEEAEEFKMKYIYTHIASMEHKEGAVALWLHSLNYRNY 541
Query: 171 PDFRLVEANGTCADMNCTQ 115
PDF VE N D TQ
Sbjct: 542 PDFHFVETNKEHFDAGQTQ 560
>ref|XP_008813054.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Phoenix
dactylifera]
Length = 567
Score = 385 bits (989), Expect = e-104
Identities = 230/457 (50%), Positives = 283/457 (61%), Gaps = 11/457 (2%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGR--RRADGESSDSSVLGSRVFPE 1264
+ H DRE+V+AS GSGNEL +CLECSERGRKV G+MGR R + GE +
Sbjct: 161 SAHPDREAVMASLGSGNELDRCLECSERGRKVPGLMGREPRTSGGEERN----------- 209
Query: 1263 VETGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXET 1084
+ GS G +++ ETR+S
Sbjct: 210 -DLGSGGVGGEDDSASNLKSETRVSA---------------------------------- 234
Query: 1083 DATLNEGLNGKDGGPALETRVNFDVGKSEVTVDTV--ENSDRSALELKNSSLEEKIEEIE 910
++EG N K G E+ V KSE+ TV E+ S+L ++ + E K EIE
Sbjct: 235 -GFISEGSN-KAGNGEFESN---KVEKSELGSSTVGGEHGGASSLNVEGENDEAKNGEIE 289
Query: 909 ASSGRKGGPPVVSMFSR--EEGKSE-----KNGEIEDNVRDAVFDDGVPSKEEKTGKTGP 751
SG+ G S+ + G S+ K G ++ V + V S +EK +TG
Sbjct: 290 --SGKDVGSAANSILDSVVDSGVSKVEECSKLGNVDFVVEAKPIVETVVSMQEKRVETGV 347
Query: 750 FCSESGELMGAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVS 571
+ +GE M + G F YG++ERERFN I K YVGTHNFHNFTTRTKAEDPSARRYI+S
Sbjct: 348 DDNTNGEQMAGRKSG-FSYGDEERERFNRISKHYVGTHNFHNFTTRTKAEDPSARRYIIS 406
Query: 570 FNADDVVSIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVN 391
FNAD +VSI+G+EFVRCEV+GQSFMLHQIRK+IGLAVA+MRNCAPE+L++ AL+K+VN+N
Sbjct: 407 FNADRIVSIEGIEFVRCEVVGQSFMLHQIRKMIGLAVALMRNCAPESLMDIALRKEVNIN 466
Query: 390 VPTAPEVGLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGV 211
VPTAPEVGLYLDE FTSYNQKWKDSHEE+SME Y EEAE+FKM YIYSHIASME KEG
Sbjct: 467 VPTAPEVGLYLDEGLFTSYNQKWKDSHEELSMEAYAEEAEEFKMKYIYSHIASMEHKEGA 526
Query: 210 VGVWLHSLNHRNYPDFRLVEANGTCADMNCTQEAKME 100
V +WLHSLN RNYPDF +E N D TQ + E
Sbjct: 527 VALWLHSLNRRNYPDFHFLETNKEHVDAEQTQVTQAE 563
>ref|XP_011099813.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Sesamum
indicum]
Length = 568
Score = 383 bits (983), Expect = e-103
Identities = 213/438 (48%), Positives = 268/438 (61%), Gaps = 5/438 (1%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+CHRDRESV+AS GSGNELVKCLECSERGRKV G+MG+R A+ ++ V VE
Sbjct: 176 SCHRDRESVLASLGSGNELVKCLECSERGRKVFGVMGKRSAEWKT---------VAEAVE 226
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
GS G+ N+ G E +I+
Sbjct: 227 VGS---GISSNSALG---EEKIAA------------------------------------ 244
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKS-----EVTVDTVENSDRSALELKNSSLEEKIEEI 913
N N + G E + D GK+ + T D+ + D + L + L EK +
Sbjct: 245 --NSSQNNETGNNDSENNLKIDAGKTGAAKNDKTEDSAVSVDPAILSNNETGLVEKRIVV 302
Query: 912 EASSGRKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESG 733
+S R G V S E G + + G ED + F+ E K+
Sbjct: 303 TSSENRNDGADGVKNASSETGNTRETGP-EDIEKMMEFEKNANGHETSEKKS-------- 353
Query: 732 ELMGAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDV 553
EFCYGE+E+ERFN ILK Y GTHNFHNFTTRTKAEDP+A+RYI+SFNA+ +
Sbjct: 354 ---------EFCYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTI 404
Query: 552 VSIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPE 373
VS+DG++FV+CEV+GQSFMLHQIRK+IGLAVA+MRNCAPE+LIETA ++ VN+NVP APE
Sbjct: 405 VSVDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETAFRQTVNINVPMAPE 464
Query: 372 VGLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLH 193
VGLYLDECFF+SYNQKWKDSHEE+SM+ Y +EAE+FKM YIY+HIAS E K+GVV +WLH
Sbjct: 465 VGLYLDECFFSSYNQKWKDSHEELSMKAYADEAEEFKMKYIYTHIASTEHKDGVVALWLH 524
Query: 192 SLNHRNYPDFRLVEANGT 139
SLN+RNYPD R ++ T
Sbjct: 525 SLNYRNYPDLRAADSAPT 542
>ref|XP_010101290.1| tRNA pseudouridine synthase A [Morus notabilis]
gi|587899845|gb|EXB88225.1| tRNA pseudouridine synthase A
[Morus notabilis]
Length = 621
Score = 374 bits (961), Expect = e-101
Identities = 212/463 (45%), Positives = 286/463 (61%), Gaps = 19/463 (4%)
Frame = -3
Query: 1431 HRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRAD--GESSDSSVLGSRVFPEVE 1258
H +RESV+AS GS +ELVKC+ECSERGRKV G+MG+R + G S DS + + +V+
Sbjct: 183 HPNRESVLASLGSESELVKCVECSERGRKVPGLMGKRSYELTGASFDSGISLNICDAKVD 242
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
+ +E ++ + + G+++V G E N S +
Sbjct: 243 SVVSDENVVASIN-----------DIGEVKVENGDSETNHASF----------DSGISSN 281
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKS----EVTVDTVENSDRSALELKNSSLEEKIEEIE 910
+ ++ + G + R +FD+G S + VD+V + + N E K+E +
Sbjct: 282 ICDAKVDSVENGDSETNRASFDLGISSNICDAKVDSVVTEENRVASV-NGVGEVKVENGD 340
Query: 909 ASSGRKG----------GPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGK 760
+ + R VVS+ E G + NG+ E V + D E +T
Sbjct: 341 SETNRASFNSGISSNICDTKVVSVVRDENGVASVNGDGEVKVENG--DSETNQVEGRTLD 398
Query: 759 TGPFCSESGELMGAFQG---GEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSA 589
E G + G + +F YGEKERERFN ILK Y GTHNFHNFTTRTKAEDP+A
Sbjct: 399 NEVSTGEEGNVNGEQKPEKRSDFSYGEKERERFNRILKHYEGTHNFHNFTTRTKAEDPAA 458
Query: 588 RRYIVSFNADDVVSIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALK 409
+R+I+SFNA+ V+ ++GMEFV+CEV+GQSFMLHQIRK+IGLAVA+MRNC PE+L+E AL+
Sbjct: 459 QRFIISFNANTVIPVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCVPESLMENALQ 518
Query: 408 KDVNVNVPTAPEVGLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASM 229
KDVN+N+PTAPEVGLYLDEC F+SYN+KWKDSHEE+SM+ Y EEAE+FKM +IYSHI
Sbjct: 519 KDVNINIPTAPEVGLYLDECLFSSYNKKWKDSHEEMSMKAYAEEAEEFKMKHIYSHIGLT 578
Query: 228 EQKEGVVGVWLHSLNHRNYPDFRLVEANGTCADMNCTQEAKME 100
EQKEGVV +WLHSLN+RNYPDF+ V+ T + + E K+E
Sbjct: 579 EQKEGVVALWLHSLNYRNYPDFQAVDNKNTTNNNSTDVENKVE 621
>gb|KHG11186.1| tRNA pseudouridine synthase A, mitochondrial [Gossypium arboreum]
Length = 601
Score = 371 bits (952), Expect = e-100
Identities = 206/428 (48%), Positives = 270/428 (63%), Gaps = 2/428 (0%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+CHRDRESV++S GSGNELVKCLECSERGRKV G+MG+R + S V+
Sbjct: 181 SCHRDRESVLSSLGSGNELVKCLECSERGRKVIGVMGKRSSFEPKSTI----------VQ 230
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
+G + L N ++ Q K EV E +D V+E+ ++D
Sbjct: 231 SGISSNNLDAEN----VIKEDNLTSQLKEEVT----EMDDSEVVEVKYNVAKSTTVQSDI 282
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSG 898
+ N G E + D SE+ + E D + K + + +I + SS
Sbjct: 283 SSNIG--------DAEGAIKEDNLTSELKEEVTEMDDSGVVADKVTVAKWRIAQCGISSN 334
Query: 897 RKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDD--GVPSKEEKTGKTGPFCSESGELM 724
+ + + SE E+ + V + +D V EE+
Sbjct: 335 IRDAENAI---KEDSLTSELKEEVTERVDSLIVEDKVNVEKNEER--------------- 376
Query: 723 GAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSI 544
FCYGE+E++RFN IL YVG+HNFHNFTTRTKA+DP+ARRYIVSF+A+ VV++
Sbjct: 377 ------RFCYGEEEKKRFNKILNHYVGSHNFHNFTTRTKADDPAARRYIVSFHANTVVTV 430
Query: 543 DGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGL 364
+G++FV+CEV+GQSFMLHQIRK+IG+AVAVMR CAPE+LIETAL+KDV++NVPTAPEVGL
Sbjct: 431 EGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRGCAPESLIETALRKDVHINVPTAPEVGL 490
Query: 363 YLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLN 184
YLDEC F+SYNQKWKDSHEE+SM+ Y+EEAE+FKM +IYSHIAS E++EGVVG+WLHSLN
Sbjct: 491 YLDECLFSSYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVGLWLHSLN 550
Query: 183 HRNYPDFR 160
HRNYPD +
Sbjct: 551 HRNYPDLQ 558
>ref|XP_010664099.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera] gi|731427773|ref|XP_010664100.1| PREDICTED:
tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera] gi|731427775|ref|XP_010664101.1| PREDICTED:
tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera] gi|731427777|ref|XP_010664102.1| PREDICTED:
tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera] gi|731427779|ref|XP_010664103.1| PREDICTED:
tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera]
Length = 571
Score = 365 bits (938), Expect = 4e-98
Identities = 214/451 (47%), Positives = 280/451 (62%), Gaps = 6/451 (1%)
Frame = -3
Query: 1431 HRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVETG 1252
H DRESV+AS GS NELVKCLECSERGRKV GIMG+R + + S +VE
Sbjct: 168 HPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDR------EDVEGE 221
Query: 1251 SKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDATL 1072
SKN V +G N++ +++ E AT
Sbjct: 222 SKNI------------------------VQLGIPSNDEAAIVN------SEVQEEIKATS 251
Query: 1071 NEGLNGKDGGPALETRVNFDVGK--SEVTVDTV--ENSDRSALELKNSSL--EEKIEEIE 910
N N D ++ + + K SEV + + ENS +++ + L E K E +
Sbjct: 252 NN--NNIDANNSISETIKEEAAKLSSEVDAEIINGENSISEPVKVGAAILKSEAKEESMA 309
Query: 909 ASSGRKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGE 730
+S R G + +EG+ ++ E ++ D+ S + + G + S+ GE
Sbjct: 310 SSDNRHDGNSISQPI--KEGRCFQDNETSESTPDSR-----ASAQNEPGVSHSEQSDKGE 362
Query: 729 LMGAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVV 550
+G FCYG+KERERFN IL YVGTHNFHNFTTR KAEDPSA+R+IVSF+ + +V
Sbjct: 363 NK-LEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIV 421
Query: 549 SIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEV 370
+++G+EFV+CEV+GQSFMLHQIRK+IGLAVA+MRN APE+L+ETAL KDVN+NVPTAPEV
Sbjct: 422 TVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEV 481
Query: 369 GLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHS 190
GLYLDECFF+SYN+KW+DSHEEVSM+ Y EEAE+FKM ++YSHIA+ E KEGVV +WLHS
Sbjct: 482 GLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHS 541
Query: 189 LNHRNYPDFRLVEANGTCADMNCTQEAKMEE 97
LNHRNYPD + NG +D +E M +
Sbjct: 542 LNHRNYPDL-CIGDNGAASDGKNGEEETMAD 571
>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
Length = 559
Score = 365 bits (938), Expect = 4e-98
Identities = 214/451 (47%), Positives = 280/451 (62%), Gaps = 6/451 (1%)
Frame = -3
Query: 1431 HRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVETG 1252
H DRESV+AS GS NELVKCLECSERGRKV GIMG+R + + S +VE
Sbjct: 156 HPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDR------EDVEGE 209
Query: 1251 SKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDATL 1072
SKN V +G N++ +++ E AT
Sbjct: 210 SKNI------------------------VQLGIPSNDEAAIVN------SEVQEEIKATS 239
Query: 1071 NEGLNGKDGGPALETRVNFDVGK--SEVTVDTV--ENSDRSALELKNSSL--EEKIEEIE 910
N N D ++ + + K SEV + + ENS +++ + L E K E +
Sbjct: 240 NN--NNIDANNSISETIKEEAAKLSSEVDAEIINGENSISEPVKVGAAILKSEAKEESMA 297
Query: 909 ASSGRKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGE 730
+S R G + +EG+ ++ E ++ D+ S + + G + S+ GE
Sbjct: 298 SSDNRHDGNSISQPI--KEGRCFQDNETSESTPDSR-----ASAQNEPGVSHSEQSDKGE 350
Query: 729 LMGAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVV 550
+G FCYG+KERERFN IL YVGTHNFHNFTTR KAEDPSA+R+IVSF+ + +V
Sbjct: 351 NK-LEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIV 409
Query: 549 SIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEV 370
+++G+EFV+CEV+GQSFMLHQIRK+IGLAVA+MRN APE+L+ETAL KDVN+NVPTAPEV
Sbjct: 410 TVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEV 469
Query: 369 GLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHS 190
GLYLDECFF+SYN+KW+DSHEEVSM+ Y EEAE+FKM ++YSHIA+ E KEGVV +WLHS
Sbjct: 470 GLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHS 529
Query: 189 LNHRNYPDFRLVEANGTCADMNCTQEAKMEE 97
LNHRNYPD + NG +D +E M +
Sbjct: 530 LNHRNYPDL-CIGDNGAASDGKNGEEETMAD 559
>ref|XP_012451661.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Gossypium raimondii] gi|763800780|gb|KJB67735.1|
hypothetical protein B456_010G207100 [Gossypium
raimondii]
Length = 601
Score = 365 bits (937), Expect = 5e-98
Identities = 207/433 (47%), Positives = 273/433 (63%), Gaps = 7/433 (1%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+CHRDRESV++S GSGNELVKCLECSERGRKV G+MG+R + E +
Sbjct: 181 SCHRDRESVLSSLGSGNELVKCLECSERGRKVIGVMGKRSSF---------------EPK 225
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
+ G+ NN + E E N+ +
Sbjct: 226 STIVQHGISSNN---------LDAENVMKEDNL-------------------------TS 251
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENS---DRSALELKN--SSLEEKIEEI 913
L E + D +E +VN V KS + + ++ A++ N S L+E++ E+
Sbjct: 252 QLKEEVTEMDDSGVVEVKVN--VAKSTIVQPDISSNIGDAEGAIKEDNLTSELKEEVTEM 309
Query: 912 EASSGRKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPS--KEEKTGKTGPFCSE 739
+ S V + G S G+ E +A+ +D + S KEE T + E
Sbjct: 310 DDSGVVADKVNVAKWTIVQCGISSNIGDAE----NAIKEDNLTSELKEEVTERVDSLVVE 365
Query: 738 SGELMGAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNAD 559
+ + F YGE+E++RFN IL YVG+HNFHNFTTRTKA+DP+ARRYIVSF+A+
Sbjct: 366 DKVNVEKKEERRFFYGEEEKKRFNKILNYYVGSHNFHNFTTRTKADDPAARRYIVSFHAN 425
Query: 558 DVVSIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTA 379
VV+++G++FV+CEV+GQSFMLHQIRK+IG+AVAVMR CAPE+LIETAL+KDV++N+PTA
Sbjct: 426 TVVTVEGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRGCAPESLIETALRKDVHINIPTA 485
Query: 378 PEVGLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVW 199
PEVGLYLDEC F+SYNQKWKDSHEE+SM+ Y+EEAE+FKM +IYSHIAS E++EGVVG+W
Sbjct: 486 PEVGLYLDECLFSSYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVGLW 545
Query: 198 LHSLNHRNYPDFR 160
LHSLNHRNYPD R
Sbjct: 546 LHSLNHRNYPDLR 558
>ref|XP_008350479.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Malus
domestica]
Length = 575
Score = 363 bits (932), Expect = 2e-97
Identities = 210/441 (47%), Positives = 270/441 (61%), Gaps = 5/441 (1%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRAD--GESSDSSVLGS--RVF 1270
+ HRDR SV+AS GS E VKCLECSERGRKV G+MG+R + G + + S+ +
Sbjct: 195 SAHRDRGSVLASLGSDQEFVKCLECSERGRKVGGLMGKRTYELRGTNFEVSISSNTNESM 254
Query: 1269 PEVETGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXX 1090
E E G K L N G + IS + ++ +++ N + V+
Sbjct: 255 VESEIGEKFRVLPGNAG----CDNLISETRNEVSLSI----NEEIKVL------------ 294
Query: 1089 ETDATLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLE-EKIEEI 913
T N G++ + L+T ++ + +EVT VEN+ E + + L E +++
Sbjct: 295 ----TENAGVDNSNS--ELKTEISISINNNEVTEIEVENNRVVPNEAEAADLNSESLDDT 348
Query: 912 EASSGRKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESG 733
S G EE +EK + EE +GK
Sbjct: 349 NVSFG-------------EEKANEKE-----------------NTEEGSGK--------- 369
Query: 732 ELMGAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDV 553
G FCYGEKERERFN IL Y GTHNFHNFTTRTKA DP+A+RYI+SFNA+
Sbjct: 370 -------GNGFCYGEKERERFNKILNSYEGTHNFHNFTTRTKAVDPAAQRYIISFNANTT 422
Query: 552 VSIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPE 373
V+++GMEFV+CEV+GQSFMLHQIRK+IGLAVA+ R CAPE+L+E AL+KDVN+NVPTAPE
Sbjct: 423 VTVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIFRGCAPESLLERALQKDVNINVPTAPE 482
Query: 372 VGLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLH 193
VGLYLDECFF+SYNQKW DSHEE+SM+ Y++EAEDFKM +IY+HIAS E KEGVVG+WLH
Sbjct: 483 VGLYLDECFFSSYNQKWGDSHEELSMKGYEQEAEDFKMKHIYTHIASTEHKEGVVGLWLH 542
Query: 192 SLNHRNYPDFRLVEANGTCAD 130
SLNHRNYPD E NG ++
Sbjct: 543 SLNHRNYPDLGPAENNGNTSN 563
>ref|XP_012829550.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Erythranthe guttatus]
Length = 594
Score = 360 bits (925), Expect = 1e-96
Identities = 214/448 (47%), Positives = 270/448 (60%), Gaps = 9/448 (2%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+CHRDRESV+AS GSGNEL KCLECSERGRKV G+MG++R + +S G VE
Sbjct: 173 SCHRDRESVLASLGSGNELAKCLECSERGRKVFGVMGKQR----NFESKAPGEGENENVE 228
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
GS G+ NNG G + E++ E +EV G + NN +
Sbjct: 229 VGS---GISSNNGTG-SFESKDVGEN--VEVGSGILSNNGSPPTD------------EKV 270
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKSE---VTVDTVENSDRSALELKNSSLEEKIEEIEA 907
N N + G E N +G ++ + VD D + L S L+E +++
Sbjct: 271 VANSLENNEIGSNGSE---NVSIGAAQDDKMEVDKAVLVDSAILSDNVSVLDESKTVVDS 327
Query: 906 SSGRKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGEL 727
S KG + E G SE +E D + K E G +E
Sbjct: 328 SE--KG----IENTDLENGSSETEKLLETG--DESIEKRNVDKLESENANGHTEAE---- 375
Query: 726 MGAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVS 547
+ EFCYGE+E+ RFN ILK Y GTHNFHNFTTRTKAEDP+ARRYI+SFNA+ VV+
Sbjct: 376 ----KKSEFCYGEEEKARFNRILKFYEGTHNFHNFTTRTKAEDPAARRYILSFNANTVVN 431
Query: 546 IDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVG 367
+DG++FV+CEV+GQSFMLHQIRK+IGLAVA+MRN PE+ +ETA + V NVP APEVG
Sbjct: 432 VDGIDFVKCEVVGQSFMLHQIRKMIGLAVAMMRNITPESKMETAFLQSVRFNVPMAPEVG 491
Query: 366 LYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSL 187
LYLDECFF+SYN KWKDSHEEVSM+ Y EE+E+FKM YIY H+AS E K+G V +WLHSL
Sbjct: 492 LYLDECFFSSYNNKWKDSHEEVSMKAYAEESEEFKMKYIYPHVASSEHKDGAVALWLHSL 551
Query: 186 NHRNYPDFRLVEA------NGTCADMNC 121
N+RN+PD R ++ NGT NC
Sbjct: 552 NYRNFPDLRAADSEPVSDGNGTEIVNNC 579
>ref|XP_009384007.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Musa
acuminata subsp. malaccensis]
Length = 572
Score = 359 bits (922), Expect = 3e-96
Identities = 202/443 (45%), Positives = 270/443 (60%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+ H DRE+V+AS GS NEL +CLECSERGRK+ G+MGR + SS+ RV +
Sbjct: 175 SAHPDREAVMASMGSDNELARCLECSERGRKIPGLMGRW------AGSSIAQKRVDLAAD 228
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
GS ++ + +LE E K+E+ + G V +
Sbjct: 229 -GSADQTV---GVACFSLEESDKSEANKLEI----FDLGSGGVDD--------------- 265
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSG 898
D + + ++G++EV + ++ A+ N + + ++ + +
Sbjct: 266 ------EQHDFSIMIAETNSANMGRNEVEAGKLVSAATDAVAPGNMNPDATVDPVASYVE 319
Query: 897 RKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMGA 718
G ++ +E E + +E+ + + D + E+ T K+
Sbjct: 320 EYGKLSNEAITMKENSTMEPSASLENQRLEPIVADRT-NGEQVTVKS------------- 365
Query: 717 FQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSIDG 538
+FCYG+++RERFN +LK YVGTHNFHNFTTRTKAEDPSARRYI+SF+A+ VV I+G
Sbjct: 366 ----KFCYGDEQRERFNSVLKHYVGTHNFHNFTTRTKAEDPSARRYIISFDANRVVCIEG 421
Query: 537 MEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLYL 358
+EFV+CEV+GQSFMLHQIRK+IGLAVAVMRNCAPE+L++ ALKKDVN+NVPTAPEVGLYL
Sbjct: 422 IEFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLMDIALKKDVNINVPTAPEVGLYL 481
Query: 357 DECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNHR 178
DEC FTSYNQKWKDSHE ++ME Y EEAE+FKM YIY HIASME KEG V +WLHSLN R
Sbjct: 482 DECLFTSYNQKWKDSHEVLTMEAYAEEAEEFKMKYIYPHIASMEHKEGAVALWLHSLNQR 541
Query: 177 NYPDFRLVEANGTCADMNCTQEA 109
NYPDF +E + CA +A
Sbjct: 542 NYPDFCFMETSRECASATSKDQA 564
>ref|XP_009334443.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Pyrus x
bretschneideri]
Length = 569
Score = 359 bits (922), Expect = 3e-96
Identities = 207/437 (47%), Positives = 263/437 (60%), Gaps = 5/437 (1%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRAD--GESSDSSVLGS--RVF 1270
+ HRDR SV+AS GS E VKCLECSERGRKV G+MG+R + G + + S+ +
Sbjct: 195 SAHRDRGSVLASLGSDQEFVKCLECSERGRKVGGLMGKRTYELRGTNFEVSISSNTNESM 254
Query: 1269 PEVETGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXX 1090
E E G K L N GG + + Q + EV++ +
Sbjct: 255 VESEIGEKFRVLPGNAGGDNLIS------QPRNEVSLSVL-------------------- 288
Query: 1089 ETDATLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLE-EKIEEI 913
T N G++ + L+ ++ + K+EV+ VEN+ E + + L E + +
Sbjct: 289 ----TQNAGVDNSNS--ELKAEISISINKNEVSEIEVENNRVVPNEAETADLNSESLNDT 342
Query: 912 EASSGRKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESG 733
S G EK E EEKT +
Sbjct: 343 NFSFGE-----------------EKANE-----------------EEKTEE--------- 359
Query: 732 ELMGAFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDV 553
G+ +G FCYGEKERERFN IL Y GTHNFHNFTTRTKA DP+A+RYI+SFNA+
Sbjct: 360 ---GSGKGNGFCYGEKERERFNKILNSYEGTHNFHNFTTRTKAVDPAAQRYIISFNANAT 416
Query: 552 VSIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPE 373
V+++ MEF++CEV+GQSFMLHQIRK+IGLAVA+ R CAPE+L+E AL+KDVN+NVPTAPE
Sbjct: 417 VTVEAMEFIKCEVVGQSFMLHQIRKMIGLAVAIFRGCAPESLLERALQKDVNINVPTAPE 476
Query: 372 VGLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLH 193
VGLYLDECFF+SYNQKW DSHEE+SM+ Y++EAEDFKM +IY+HIAS E KEGVVG+WLH
Sbjct: 477 VGLYLDECFFSSYNQKWGDSHEELSMKGYEQEAEDFKMKHIYTHIASTEHKEGVVGLWLH 536
Query: 192 SLNHRNYPDFRLVEANG 142
SLNHRNYPD E NG
Sbjct: 537 SLNHRNYPDLGPAENNG 553
>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 584
Score = 350 bits (899), Expect = 1e-93
Identities = 204/424 (48%), Positives = 254/424 (59%)
Frame = -3
Query: 1431 HRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVETG 1252
HRDRESV+AS GSG+ELVKCLECSERGRKV G +G R F
Sbjct: 183 HRDRESVLASLGSGDELVKCLECSERGRKVIG---------------AVGKRSFESKSEA 227
Query: 1251 SKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDATL 1072
+ + L+ GG A+ +CE K ++++ +M+N G + +T+ +
Sbjct: 228 FQTDILLN---GGCAIA---NCEI-KEDISM-SMDNAHGVRMH------SEFVEQTNVSH 273
Query: 1071 NEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSGRK 892
NE + P D + NS+ ++ + E + E A G K
Sbjct: 274 NEDSETESAMPR---------------TDILSNSEDGNVKSDSKQEEVMVSEDAADGGNK 318
Query: 891 GGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMGAFQ 712
+ G+ NGE +
Sbjct: 319 ESETMEKDSKASVGEERVNGEEH----------------------------------VMK 344
Query: 711 GGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSIDGME 532
G EFCYGE+E+E+FN ILK YVG+HNFHNFTTRTKAEDPSA+RYI+SF+A V+++G+E
Sbjct: 345 GSEFCYGEEEKEKFNRILKYYVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIE 404
Query: 531 FVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLYLDE 352
FV+CEVIGQSFMLHQIRK+IGLAVA+MRNCAPE+LI TAL+KDV +NVPTAPEVGLYLDE
Sbjct: 405 FVKCEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDE 464
Query: 351 CFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNHRNY 172
CFFTSYNQKWKD HEE+ M+ Y+E AEDFKM YIYSHIAS EQKEGVVG+WLHSLN+RNY
Sbjct: 465 CFFTSYNQKWKD-HEELCMKDYEEVAEDFKMKYIYSHIASTEQKEGVVGLWLHSLNYRNY 523
Query: 171 PDFR 160
PD R
Sbjct: 524 PDLR 527
>ref|XP_010266941.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Nelumbo
nucifera] gi|720035139|ref|XP_010266942.1| PREDICTED:
tRNA pseudouridine synthase A, mitochondrial-like
[Nelumbo nucifera]
Length = 541
Score = 350 bits (898), Expect = 2e-93
Identities = 211/436 (48%), Positives = 255/436 (58%), Gaps = 3/436 (0%)
Frame = -3
Query: 1431 HRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVETG 1252
HRD ESV+AS GS NELV+C ECSERG KVA V+G R
Sbjct: 175 HRDGESVLASLGSENELVRCSECSERGHKVA---------------DVMGRR-------- 211
Query: 1251 SKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDATL 1072
NE NGG ND TDA+
Sbjct: 212 -DNESKTVENGG------------------------ND-----------------TDASH 229
Query: 1071 NEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEE---IEASS 901
++ + E+RV+ + G + V+ N R + L ++ + + E + +S
Sbjct: 230 SKASD--------ESRVSSESGIATVSQSETTNEPRVS-SLDGIAVPDGLAEGCVVLSSD 280
Query: 900 GRKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMG 721
R P S + + G S NG ++ PS E CS E
Sbjct: 281 NRTTYPH--SELAEDVGISSSNGTAVSQSES--IEEPNPSSVENENNLVR-CSNGEETSA 335
Query: 720 AFQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSID 541
+G FCYG KE+ERFN ILK Y GTHNFHNFTTRTKAEDPSARR+IVSFNA+ VV+++
Sbjct: 336 --KGSRFCYGNKEKERFNRILKHYEGTHNFHNFTTRTKAEDPSARRFIVSFNANKVVTVE 393
Query: 540 GMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLY 361
GM+FV+CEV+GQSFMLHQIRK+IGLAVAVMRNCAPE+LI+TA KD+N+N+PTAPEVGLY
Sbjct: 394 GMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLIDTAFGKDININMPTAPEVGLY 453
Query: 360 LDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNH 181
LDEC FTSYN KWKDSHEE+SME YKEEAE+FKM +IYSHI S EQKEGVV +WLHSLNH
Sbjct: 454 LDECLFTSYNHKWKDSHEELSMETYKEEAEEFKMEHIYSHIVSTEQKEGVVALWLHSLNH 513
Query: 180 RNYPDFRLVEANGTCA 133
RNYPDF + N T A
Sbjct: 514 RNYPDFCIDGDNVTTA 529
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
A, related protein [Medicago truncatula]
Length = 530
Score = 346 bits (887), Expect = 3e-92
Identities = 197/435 (45%), Positives = 255/435 (58%)
Frame = -3
Query: 1434 CHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVET 1255
CHRDRE+V+AS GS NELVKCL CSER
Sbjct: 182 CHRDRETVLASLGSENELVKCLPCSER--------------------------------- 208
Query: 1254 GSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDAT 1075
G K EG++ N+ LE ++V G+ ND
Sbjct: 209 GRKVEGVVGNSKRNLELEA--------VDVENGSSNKND--------------------- 239
Query: 1074 LNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSGR 895
+++ V DV EV++ +++ + + ++ + +EE+ + +
Sbjct: 240 ------------VVDSGVTKDV---EVSLSKGDDNHLNKESINDNEGKVSVEEVNSKT-- 282
Query: 894 KGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMGAF 715
+ S E+ + NG E+N+ G+ +EEK + + SG
Sbjct: 283 --------VVSDEDEVAPINGGSENNL-------GI-LEEEKVNREDTAANGSG------ 320
Query: 714 QGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSIDGM 535
FCYGEKERERFN ILK YVGTHNFHNFTTR K EDPSA+R+I+SF+A V ++GM
Sbjct: 321 ----FCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGM 376
Query: 534 EFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLYLD 355
EFV+CE++GQSFMLHQIRK++GLAVA+MRNCAPE+LIE AL+KDV++ VPTAPEVGLYLD
Sbjct: 377 EFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLD 436
Query: 354 ECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNHRN 175
ECFFTSYNQKWKD+HEEVSM+ Y++EAEDFKM YIY HIAS E KEG VG+WLHSLNHRN
Sbjct: 437 ECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRN 496
Query: 174 YPDFRLVEANGTCAD 130
YPD R+++ G D
Sbjct: 497 YPDLRILDGEGVTND 511
>ref|XP_006828885.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Amborella
trichopoda] gi|548833864|gb|ERM96301.1| hypothetical
protein AMTR_s00001p00184260 [Amborella trichopoda]
Length = 607
Score = 344 bits (883), Expect = 9e-92
Identities = 208/443 (46%), Positives = 278/443 (62%), Gaps = 11/443 (2%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+ H DRE+V AS GS NELVKC ECSERGRKV G+MG DG + V G +V
Sbjct: 170 SAHPDREAVAASLGSDNELVKCTECSERGRKVPGVMGH--GDGRVT---VSGDKVKVSES 224
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
G + + ENN GG T +S E G + +++DG E+ +
Sbjct: 225 NGDAAQ-IRENNEGGGDQHT-VSEENGS-GAQIRFTDDDDGGAGEIRVSEEERGAC--EI 279
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSG 898
++EG DGG + ETRVN +++V+ D V + S LE+K S +E ++ E +A
Sbjct: 280 KVSEG----DGG-SNETRVNRRTIETKVSEDEVVGA--SGLEIKGSEVETRVSENDAGFT 332
Query: 897 RKGGPPVVS--MFSREEGKS-----EKNGEIEDNVRDAVFDDGVPSKEEKTGK--TGPFC 745
G V ++ G S E NG+ N++ V D E +T TG
Sbjct: 333 ALGTDNGVQGELYENRNGVSLSDSREGNGK---NLQHRVSVDSSLKNETETEIHITGDQ- 388
Query: 744 SESGELMGAFQGGE--FCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVS 571
G+L F Y E+ +ERFN ILK+YVGTHNFHN TTRTKAE PSA RYI+S
Sbjct: 389 PRDGDLSNGVTTDNTGFIYSEEVKERFNKILKQYVGTHNFHNLTTRTKAECPSAFRYILS 448
Query: 570 FNADDVVSIDGMEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVN 391
F A++VV++DG++F++C V+GQSFMLHQIRK++GLAVA+MR CAP+++I TAL+KD+ +N
Sbjct: 449 FEANEVVTVDGIDFIKCVVLGQSFMLHQIRKMVGLAVAIMRGCAPDSMIATALRKDLRIN 508
Query: 390 VPTAPEVGLYLDECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGV 211
VPTAPE+GL+LDEC +TSYNQKW DSHEE+S++ Y +AE+FKM +IYSHIAS E KEG+
Sbjct: 509 VPTAPELGLFLDECLYTSYNQKWSDSHEELSLKDYAVQAEEFKMKHIYSHIASTEHKEGL 568
Query: 210 VGVWLHSLNHRNYPDFRLVEANG 142
V +WLHSLN RNYPDF++ +G
Sbjct: 569 VALWLHSLNQRNYPDFQMAGIDG 591
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
A, related protein [Medicago truncatula]
gi|388510220|gb|AFK43176.1| unknown [Medicago truncatula]
Length = 530
Score = 342 bits (878), Expect = 3e-91
Identities = 195/435 (44%), Positives = 254/435 (58%)
Frame = -3
Query: 1434 CHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVET 1255
CHRDRE+V+AS GS NELVKCL CS E
Sbjct: 182 CHRDRETVLASLGSENELVKCLPCS---------------------------------ER 208
Query: 1254 GSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDAT 1075
G K EG++ N+ LE ++V G+ ND
Sbjct: 209 GRKVEGVVGNSKRNLELEA--------VDVENGSSNKND--------------------- 239
Query: 1074 LNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSGR 895
+++ V DV EV++ +++ + + ++ + +EE+ + +
Sbjct: 240 ------------VVDSGVTKDV---EVSLSKGDDNHLNKESINDNEGKVSVEEVNSKT-- 282
Query: 894 KGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMGAF 715
+ S ++ + NG E+N+ G+ +EEK + + SG
Sbjct: 283 --------VVSDQDEVAPINGGSENNL-------GI-LEEEKVNREDTAANGSG------ 320
Query: 714 QGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSIDGM 535
FCYGEKERERFN ILK YVGTHNFHNFTTR K EDPSA+R+I+SF+A V ++GM
Sbjct: 321 ----FCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGM 376
Query: 534 EFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLYLD 355
EFV+CE++GQSFMLHQIRK++GLAVA+MRNCAPE+LIE AL+KDV++ VPTAPEVGLYLD
Sbjct: 377 EFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLD 436
Query: 354 ECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNHRN 175
ECFFTSYNQKWKD+HEEVSM+ Y++EAEDFKM YIY HIAS E KEG VG+WLHSLNHRN
Sbjct: 437 ECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRN 496
Query: 174 YPDFRLVEANGTCAD 130
YPD R+++ G D
Sbjct: 497 YPDLRILDGEGVTND 511
>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X2 [Glycine max]
Length = 518
Score = 342 bits (877), Expect = 4e-91
Identities = 200/428 (46%), Positives = 248/428 (57%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+CHRDRE+V+AS GSGNELVKCLECS E
Sbjct: 147 SCHRDRETVMASLGSGNELVKCLECS---------------------------------E 173
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
G K GL+ N LE ++V G N D V E
Sbjct: 174 RGRKVVGLVGNRKQNLELEA--------VDVEAGISSNRDSGVTE--------------- 210
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSG 898
+ V+ G + N ++ + K + LE I
Sbjct: 211 ---------------DVEVSLSKGDDNHLNEESGNDNKGGMNCK-TGLETVI-------- 246
Query: 897 RKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMGA 718
PV +EEG + NGE +N D + ++ V +++ T
Sbjct: 247 -----PV-----QEEG-TPLNGESVNN-SDILEEEKVNGEDKPTN--------------- 279
Query: 717 FQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSIDG 538
G FCYGEKERERFN ILK +VGTHNFHNFTTRTKAEDP+ARRYI+SFNA+ + ++G
Sbjct: 280 --GSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEG 337
Query: 537 MEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLYL 358
+EFV+CEV+GQSFMLHQIRK+IGLAVA+MRNCAPE+LI+ AL++DVN+NVPTAPEVGLYL
Sbjct: 338 VEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYL 397
Query: 357 DECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNHR 178
DECFFTSYNQKWKD HEE+SM+ Y++EA++FKM YIYSHIAS EQKEG V +WLHSLNHR
Sbjct: 398 DECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNHR 456
Query: 177 NYPDFRLV 154
NYPD R++
Sbjct: 457 NYPDLRVI 464
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X1 [Glycine max]
Length = 548
Score = 342 bits (877), Expect = 4e-91
Identities = 200/428 (46%), Positives = 248/428 (57%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+CHRDRE+V+AS GSGNELVKCLECS E
Sbjct: 177 SCHRDRETVMASLGSGNELVKCLECS---------------------------------E 203
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
G K GL+ N LE ++V G N D V E
Sbjct: 204 RGRKVVGLVGNRKQNLELEA--------VDVEAGISSNRDSGVTE--------------- 240
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSG 898
+ V+ G + N ++ + K + LE I
Sbjct: 241 ---------------DVEVSLSKGDDNHLNEESGNDNKGGMNCK-TGLETVI-------- 276
Query: 897 RKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMGA 718
PV +EEG + NGE +N D + ++ V +++ T
Sbjct: 277 -----PV-----QEEG-TPLNGESVNN-SDILEEEKVNGEDKPTN--------------- 309
Query: 717 FQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSIDG 538
G FCYGEKERERFN ILK +VGTHNFHNFTTRTKAEDP+ARRYI+SFNA+ + ++G
Sbjct: 310 --GSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEG 367
Query: 537 MEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLYL 358
+EFV+CEV+GQSFMLHQIRK+IGLAVA+MRNCAPE+LI+ AL++DVN+NVPTAPEVGLYL
Sbjct: 368 VEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYL 427
Query: 357 DECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNHR 178
DECFFTSYNQKWKD HEE+SM+ Y++EA++FKM YIYSHIAS EQKEG V +WLHSLNHR
Sbjct: 428 DECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNHR 486
Query: 177 NYPDFRLV 154
NYPD R++
Sbjct: 487 NYPDLRVI 494
>gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]
Length = 552
Score = 340 bits (872), Expect = 2e-90
Identities = 199/428 (46%), Positives = 247/428 (57%)
Frame = -3
Query: 1437 NCHRDRESVIASAGSGNELVKCLECSERGRKVAGIMGRRRADGESSDSSVLGSRVFPEVE 1258
+CHRDRE+V+AS GSGNELVKCLECS E
Sbjct: 181 SCHRDRETVMASLGSGNELVKCLECS---------------------------------E 207
Query: 1257 TGSKNEGLIENNGGGHALETRISCEQGKIEVNVGAMENNDGSVIELXXXXXXXXXXETDA 1078
G K GL+ N LE ++V G N D V E
Sbjct: 208 RGRKVVGLVGNRKQNLELEA--------VDVEAGISSNRDSGVTE--------------- 244
Query: 1077 TLNEGLNGKDGGPALETRVNFDVGKSEVTVDTVENSDRSALELKNSSLEEKIEEIEASSG 898
+ V+ G + N ++ + K + LE I
Sbjct: 245 ---------------DVEVSLSKGDDNHLNEESGNDNKGGMNCK-TGLETVI-------- 280
Query: 897 RKGGPPVVSMFSREEGKSEKNGEIEDNVRDAVFDDGVPSKEEKTGKTGPFCSESGELMGA 718
PV +EEG + NGE +N D + ++ V +++ T
Sbjct: 281 -----PV-----QEEG-TPLNGESVNN-SDILEEEKVNGEDKPTN--------------- 313
Query: 717 FQGGEFCYGEKERERFNGILKRYVGTHNFHNFTTRTKAEDPSARRYIVSFNADDVVSIDG 538
G FCYGEKERERFN ILK +VGTHNFHNFTTRTKAEDP+ARRYI+SFNA+ + ++G
Sbjct: 314 --GSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEG 371
Query: 537 MEFVRCEVIGQSFMLHQIRKLIGLAVAVMRNCAPEALIETALKKDVNVNVPTAPEVGLYL 358
+EFV+CEV+GQSFMLHQIRK+IGLAVA+MRNCAPE+LI+ AL++DVN+NVPTAPEVGLYL
Sbjct: 372 VEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYL 431
Query: 357 DECFFTSYNQKWKDSHEEVSMEVYKEEAEDFKMNYIYSHIASMEQKEGVVGVWLHSLNHR 178
DECFFTSYNQKWKD HEE+SM+ Y++EA++FKM YIYSHIAS EQKEG V +WLHSLNHR
Sbjct: 432 DECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNHR 490
Query: 177 NYPDFRLV 154
NYPD ++
Sbjct: 491 NYPDLHVI 498