BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00013567
         (4234 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010936107.1| PREDICTED: mediator of RNA polymerase II tra...   511   e-141
ref|XP_010936106.1| PREDICTED: mediator of RNA polymerase II tra...   511   e-141
ref|XP_010936105.1| PREDICTED: mediator of RNA polymerase II tra...   511   e-141
ref|XP_010936104.1| PREDICTED: mediator of RNA polymerase II tra...   511   e-141
ref|XP_010245153.1| PREDICTED: mediator of RNA polymerase II tra...   509   e-140
ref|XP_010245151.1| PREDICTED: mediator of RNA polymerase II tra...   509   e-140
ref|XP_008812740.1| PREDICTED: mediator of RNA polymerase II tra...   505   e-139
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   487   e-134
ref|XP_010097158.1| hypothetical protein L484_025703 [Morus nota...   485   e-133
ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II tra...   485   e-133
ref|XP_009348727.1| PREDICTED: mediator of RNA polymerase II tra...   484   e-133
ref|XP_009348726.1| PREDICTED: mediator of RNA polymerase II tra...   484   e-133
ref|XP_009348724.1| PREDICTED: mediator of RNA polymerase II tra...   484   e-133
ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II tra...   483   e-133
ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citr...   483   e-133
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  483   e-133
gb|KDO52330.1| hypothetical protein CISIN_1g000769mg [Citrus sin...   482   e-132
ref|XP_009367255.1| PREDICTED: mediator of RNA polymerase II tra...   480   e-132
ref|XP_007023331.1| Uncharacterized protein TCM_027312 [Theobrom...   479   e-132
ref|XP_008384602.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   479   e-132

>ref|XP_010936107.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X4 [Elaeis guineensis]
          Length = 1365

 Score =  511 bits (1315), Expect = e-141
 Identities = 278/460 (60%), Positives = 329/460 (71%), Gaps = 2/460 (0%)
 Frame = -1

Query: 1627 NEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXXX 1448
            NEVNE KVRPG GIK+ L+ Q + AGQR   Y  QLK G+ F +                
Sbjct: 908  NEVNESKVRPGLGIKAGLYQQHYPAGQRPG-YYHQLKPGASFPISSPQNLQSSSPQISHH 966

Query: 1447 XXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNAG 1268
               Q+DQ NL  +  K GTPLQ+ANSP                 DSEKQ   +SS  NAG
Sbjct: 967  SSPQVDQHNLLPSQVKAGTPLQSANSPFVPSPSTPLAPSPIPA-DSEKQLSGLSSLTNAG 1025

Query: 1267 NAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLER 1088
            + GHQQ+   P Q QSL++GTPGISASP LAE+TS DGNQ NVPS + GK++  E+PLER
Sbjct: 1026 HVGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQANVPSVVPGKTNASERPLER 1085

Query: 1087 LIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARNF 908
            LIKVV+S + KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARNF
Sbjct: 1086 LIKVVKSSTPKALSSAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 1145

Query: 907  ISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFESD--LENSELESTATTRIRRYRAEV 734
            +S DGS TTKK +   S MPL+ +SSA S N+SF+    L+ SELESTAT+ ++R + EV
Sbjct: 1146 MSQDGSATTKKIKRNTSAMPLNNVSSAGSVNESFKQSYGLDTSELESTATSHVKRQKIEV 1205

Query: 733  NNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEGTIVKCSFNALAASSNLKSQYAS 554
            N+ALL+E+ EINQ+LIDT + IS+ED DSIAAA++GEGT++KCSF A+A S +LKSQ+AS
Sbjct: 1206 NHALLEEISEINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFAS 1265

Query: 553  AQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQPMSL 374
            +QI PILPLRL VPA+YP CSP+LLDKLP E S E +DLSVKA+ RFSISLRGL QPMSL
Sbjct: 1266 SQISPILPLRLLVPANYPKCSPVLLDKLPDESSGETDDLSVKAKSRFSISLRGLSQPMSL 1325

Query: 373  GEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            GEM +TWD CAR VIAEYAQQ+GGGSFSSRYGAWENCV A
Sbjct: 1326 GEMAKTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1365



 Score =  171 bits (432), Expect = 6e-39
 Identities = 104/267 (38%), Positives = 141/267 (52%), Gaps = 7/267 (2%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            S+DS A+ G  G  DLQEEIYQKIKS +E+Y  +L E  QK+ ++ QQ +AL    K ++
Sbjct: 566  SVDSIAQTGDAGVADLQEEIYQKIKSWREMYFTDLNEFYQKVALKLQQHDALIPPAKPSE 625

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
              EK+K+FK  L+R +  LQ  K++I P  KEKLP  E+QI N LA     K   SQ  G
Sbjct: 626  QYEKMKTFKTMLERTLVILQISKNNIQPGLKEKLPLYERQIHNVLASTK-KKGIPSQSQG 684

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
             QQ QH  G  H                                              SM
Sbjct: 685  QQQFQHPGGLAHSMPQQQPSQVSQLQQHDNHPNQVQQMNLQVSATSMQPSAVTGMQHVSM 744

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQ-------NTINAPQ 1952
            PL    GVP TQQN+ N+LQ ++NL+S  G +  SL QGA+GS+QQ       +T+NAPQ
Sbjct: 745  PLPTNFGVPTTQQNITNALQPAANLDSVQGSSFNSLQQGAMGSMQQVGVGSVPSTVNAPQ 804

Query: 1951 KTNTGTLSHSTLNQLQPSVNSLPLNSS 1871
            +TN  TLS+S++N LQ + + +  +S+
Sbjct: 805  QTNANTLSNSSMNTLQSNASLVQPSSN 831



 Score = 89.0 bits (219), Expect = 3e-14
 Identities = 83/264 (31%), Positives = 117/264 (44%), Gaps = 11/264 (4%)
 Frame = -1

Query: 4042 DYLRKISMKMMALESKSLNGA--DNSIPSNYVGNQNPSDLAIQGLHSQLCNPGQSL---- 3881
            DYLRKIS+KM+++E+K+ +    ++S+P+  + NQNP+D        Q+ N GQSL    
Sbjct: 70   DYLRKISLKMLSIETKTQHTPPINSSMPNTTIPNQNPTD--------QVGNQGQSLAIPM 121

Query: 3880 --PMGXXXXXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQ 3707
              P                  A+          L +ALSS+ GL Q+ +S+V  Q +NLQ
Sbjct: 122  VNPFPARQQLLPQNLQNNTSTAVQSSAN-----LPSALSSIAGLGQSNISSV-GQTSNLQ 175

Query: 3706 AMSGISQNSINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTM 3527
             M GISQNS++NSVGQ    + ++N QR M                         QH   
Sbjct: 176  NMPGISQNSVSNSVGQGAAPDIYANVQRQM--QGRQYQQHVTSEQQQQSQNQLIYQHQLQ 233

Query: 3526 NQNLQQGIMQPPLLQSHM---HQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPS 3356
             Q L+Q +    LLQ HM    Q                           Q+T +Q QP+
Sbjct: 234  QQLLKQKLQHCSLLQPHMQQQQQEQSLLRPTQLQSSQQSLIQMPSGLQSGQSTIQQTQPT 293

Query: 3355 MVQSAPQSSLIQNQPSSVQQPRPS 3284
             +QSA Q    Q Q +S+QQ  PS
Sbjct: 294  TMQSAVQPVFQQIQLNSIQQSVPS 317


>ref|XP_010936106.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X3 [Elaeis guineensis]
          Length = 1367

 Score =  511 bits (1315), Expect = e-141
 Identities = 278/460 (60%), Positives = 329/460 (71%), Gaps = 2/460 (0%)
 Frame = -1

Query: 1627 NEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXXX 1448
            NEVNE KVRPG GIK+ L+ Q + AGQR   Y  QLK G+ F +                
Sbjct: 910  NEVNESKVRPGLGIKAGLYQQHYPAGQRPG-YYHQLKPGASFPISSPQNLQSSSPQISHH 968

Query: 1447 XXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNAG 1268
               Q+DQ NL  +  K GTPLQ+ANSP                 DSEKQ   +SS  NAG
Sbjct: 969  SSPQVDQHNLLPSQVKAGTPLQSANSPFVPSPSTPLAPSPIPA-DSEKQLSGLSSLTNAG 1027

Query: 1267 NAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLER 1088
            + GHQQ+   P Q QSL++GTPGISASP LAE+TS DGNQ NVPS + GK++  E+PLER
Sbjct: 1028 HVGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQANVPSVVPGKTNASERPLER 1087

Query: 1087 LIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARNF 908
            LIKVV+S + KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARNF
Sbjct: 1088 LIKVVKSSTPKALSSAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 1147

Query: 907  ISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFESD--LENSELESTATTRIRRYRAEV 734
            +S DGS TTKK +   S MPL+ +SSA S N+SF+    L+ SELESTAT+ ++R + EV
Sbjct: 1148 MSQDGSATTKKIKRNTSAMPLNNVSSAGSVNESFKQSYGLDTSELESTATSHVKRQKIEV 1207

Query: 733  NNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEGTIVKCSFNALAASSNLKSQYAS 554
            N+ALL+E+ EINQ+LIDT + IS+ED DSIAAA++GEGT++KCSF A+A S +LKSQ+AS
Sbjct: 1208 NHALLEEISEINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFAS 1267

Query: 553  AQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQPMSL 374
            +QI PILPLRL VPA+YP CSP+LLDKLP E S E +DLSVKA+ RFSISLRGL QPMSL
Sbjct: 1268 SQISPILPLRLLVPANYPKCSPVLLDKLPDESSGETDDLSVKAKSRFSISLRGLSQPMSL 1327

Query: 373  GEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            GEM +TWD CAR VIAEYAQQ+GGGSFSSRYGAWENCV A
Sbjct: 1328 GEMAKTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1367



 Score =  171 bits (432), Expect = 6e-39
 Identities = 104/267 (38%), Positives = 141/267 (52%), Gaps = 7/267 (2%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            S+DS A+ G  G  DLQEEIYQKIKS +E+Y  +L E  QK+ ++ QQ +AL    K ++
Sbjct: 568  SVDSIAQTGDAGVADLQEEIYQKIKSWREMYFTDLNEFYQKVALKLQQHDALIPPAKPSE 627

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
              EK+K+FK  L+R +  LQ  K++I P  KEKLP  E+QI N LA     K   SQ  G
Sbjct: 628  QYEKMKTFKTMLERTLVILQISKNNIQPGLKEKLPLYERQIHNVLASTK-KKGIPSQSQG 686

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
             QQ QH  G  H                                              SM
Sbjct: 687  QQQFQHPGGLAHSMPQQQPSQVSQLQQHDNHPNQVQQMNLQVSATSMQPSAVTGMQHVSM 746

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQ-------NTINAPQ 1952
            PL    GVP TQQN+ N+LQ ++NL+S  G +  SL QGA+GS+QQ       +T+NAPQ
Sbjct: 747  PLPTNFGVPTTQQNITNALQPAANLDSVQGSSFNSLQQGAMGSMQQVGVGSVPSTVNAPQ 806

Query: 1951 KTNTGTLSHSTLNQLQPSVNSLPLNSS 1871
            +TN  TLS+S++N LQ + + +  +S+
Sbjct: 807  QTNANTLSNSSMNTLQSNASLVQPSSN 833



 Score = 89.0 bits (219), Expect = 3e-14
 Identities = 83/264 (31%), Positives = 117/264 (44%), Gaps = 11/264 (4%)
 Frame = -1

Query: 4042 DYLRKISMKMMALESKSLNGA--DNSIPSNYVGNQNPSDLAIQGLHSQLCNPGQSL---- 3881
            DYLRKIS+KM+++E+K+ +    ++S+P+  + NQNP+D        Q+ N GQSL    
Sbjct: 72   DYLRKISLKMLSIETKTQHTPPINSSMPNTTIPNQNPTD--------QVGNQGQSLAIPM 123

Query: 3880 --PMGXXXXXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQ 3707
              P                  A+          L +ALSS+ GL Q+ +S+V  Q +NLQ
Sbjct: 124  VNPFPARQQLLPQNLQNNTSTAVQSSAN-----LPSALSSIAGLGQSNISSV-GQTSNLQ 177

Query: 3706 AMSGISQNSINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTM 3527
             M GISQNS++NSVGQ    + ++N QR M                         QH   
Sbjct: 178  NMPGISQNSVSNSVGQGAAPDIYANVQRQM--QGRQYQQHVTSEQQQQSQNQLIYQHQLQ 235

Query: 3526 NQNLQQGIMQPPLLQSHM---HQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPS 3356
             Q L+Q +    LLQ HM    Q                           Q+T +Q QP+
Sbjct: 236  QQLLKQKLQHCSLLQPHMQQQQQEQSLLRPTQLQSSQQSLIQMPSGLQSGQSTIQQTQPT 295

Query: 3355 MVQSAPQSSLIQNQPSSVQQPRPS 3284
             +QSA Q    Q Q +S+QQ  PS
Sbjct: 296  TMQSAVQPVFQQIQLNSIQQSVPS 319


>ref|XP_010936105.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X2 [Elaeis guineensis]
          Length = 1391

 Score =  511 bits (1315), Expect = e-141
 Identities = 278/460 (60%), Positives = 329/460 (71%), Gaps = 2/460 (0%)
 Frame = -1

Query: 1627 NEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXXX 1448
            NEVNE KVRPG GIK+ L+ Q + AGQR   Y  QLK G+ F +                
Sbjct: 934  NEVNESKVRPGLGIKAGLYQQHYPAGQRPG-YYHQLKPGASFPISSPQNLQSSSPQISHH 992

Query: 1447 XXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNAG 1268
               Q+DQ NL  +  K GTPLQ+ANSP                 DSEKQ   +SS  NAG
Sbjct: 993  SSPQVDQHNLLPSQVKAGTPLQSANSPFVPSPSTPLAPSPIPA-DSEKQLSGLSSLTNAG 1051

Query: 1267 NAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLER 1088
            + GHQQ+   P Q QSL++GTPGISASP LAE+TS DGNQ NVPS + GK++  E+PLER
Sbjct: 1052 HVGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQANVPSVVPGKTNASERPLER 1111

Query: 1087 LIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARNF 908
            LIKVV+S + KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARNF
Sbjct: 1112 LIKVVKSSTPKALSSAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 1171

Query: 907  ISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFESD--LENSELESTATTRIRRYRAEV 734
            +S DGS TTKK +   S MPL+ +SSA S N+SF+    L+ SELESTAT+ ++R + EV
Sbjct: 1172 MSQDGSATTKKIKRNTSAMPLNNVSSAGSVNESFKQSYGLDTSELESTATSHVKRQKIEV 1231

Query: 733  NNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEGTIVKCSFNALAASSNLKSQYAS 554
            N+ALL+E+ EINQ+LIDT + IS+ED DSIAAA++GEGT++KCSF A+A S +LKSQ+AS
Sbjct: 1232 NHALLEEISEINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFAS 1291

Query: 553  AQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQPMSL 374
            +QI PILPLRL VPA+YP CSP+LLDKLP E S E +DLSVKA+ RFSISLRGL QPMSL
Sbjct: 1292 SQISPILPLRLLVPANYPKCSPVLLDKLPDESSGETDDLSVKAKSRFSISLRGLSQPMSL 1351

Query: 373  GEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            GEM +TWD CAR VIAEYAQQ+GGGSFSSRYGAWENCV A
Sbjct: 1352 GEMAKTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1391



 Score =  171 bits (432), Expect = 6e-39
 Identities = 104/267 (38%), Positives = 141/267 (52%), Gaps = 7/267 (2%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            S+DS A+ G  G  DLQEEIYQKIKS +E+Y  +L E  QK+ ++ QQ +AL    K ++
Sbjct: 592  SVDSIAQTGDAGVADLQEEIYQKIKSWREMYFTDLNEFYQKVALKLQQHDALIPPAKPSE 651

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
              EK+K+FK  L+R +  LQ  K++I P  KEKLP  E+QI N LA     K   SQ  G
Sbjct: 652  QYEKMKTFKTMLERTLVILQISKNNIQPGLKEKLPLYERQIHNVLASTK-KKGIPSQSQG 710

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
             QQ QH  G  H                                              SM
Sbjct: 711  QQQFQHPGGLAHSMPQQQPSQVSQLQQHDNHPNQVQQMNLQVSATSMQPSAVTGMQHVSM 770

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQ-------NTINAPQ 1952
            PL    GVP TQQN+ N+LQ ++NL+S  G +  SL QGA+GS+QQ       +T+NAPQ
Sbjct: 771  PLPTNFGVPTTQQNITNALQPAANLDSVQGSSFNSLQQGAMGSMQQVGVGSVPSTVNAPQ 830

Query: 1951 KTNTGTLSHSTLNQLQPSVNSLPLNSS 1871
            +TN  TLS+S++N LQ + + +  +S+
Sbjct: 831  QTNANTLSNSSMNTLQSNASLVQPSSN 857



 Score =  132 bits (333), Expect = 2e-27
 Identities = 111/316 (35%), Positives = 157/316 (49%), Gaps = 11/316 (3%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPAS-PE---DHAGVASKFEERIYSVAANQRDYLR 4031
            DWR+QLQ + R RII K+++TLKR  P S PE   +   +A +FEE+IY+ A +Q DYLR
Sbjct: 40   DWRSQLQHDARLRIINKIMDTLKRHLPISVPEGLNELQKIAVRFEEKIYNAATSQPDYLR 99

Query: 4030 KISMKMMALESKSLN--GADNSIPSNYVGNQNPSDLAIQGLHSQLCNPGQSL--PMGXXX 3863
            KIS+KM+++E+K+ +    ++S+P+  + NQNP+D        Q+ N GQSL  PM    
Sbjct: 100  KISLKMLSIETKTQHTPPINSSMPNTTIPNQNPTD--------QVGNQGQSLAIPMVNPF 151

Query: 3862 XXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQN 3683
                        N  +        +L +ALSS+ GL Q+ +S+ V Q +NLQ M GISQN
Sbjct: 152  PARQQLLPQNLQNNTS-TAVQSSANLPSALSSIAGLGQSNISS-VGQTSNLQNMPGISQN 209

Query: 3682 SINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQQGI 3503
            S++NSVGQ    + ++N QR M                         QH    Q L+Q +
Sbjct: 210  SVSNSVGQGAAPDIYANVQRQM--QGRQYQQHVTSEQQQQSQNQLIYQHQLQQQLLKQKL 267

Query: 3502 MQPPLLQSHM---HQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQS 3332
                LLQ HM    Q                           Q+T +Q QP+ +QSA Q 
Sbjct: 268  QHCSLLQPHMQQQQQEQSLLRPTQLQSSQQSLIQMPSGLQSGQSTIQQTQPTTMQSAVQP 327

Query: 3331 SLIQNQPSSVQQPRPS 3284
               Q Q +S+QQ  PS
Sbjct: 328  VFQQIQLNSIQQSVPS 343


>ref|XP_010936104.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X1 [Elaeis guineensis]
          Length = 1398

 Score =  511 bits (1315), Expect = e-141
 Identities = 278/460 (60%), Positives = 329/460 (71%), Gaps = 2/460 (0%)
 Frame = -1

Query: 1627 NEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXXX 1448
            NEVNE KVRPG GIK+ L+ Q + AGQR   Y  QLK G+ F +                
Sbjct: 941  NEVNESKVRPGLGIKAGLYQQHYPAGQRPG-YYHQLKPGASFPISSPQNLQSSSPQISHH 999

Query: 1447 XXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNAG 1268
               Q+DQ NL  +  K GTPLQ+ANSP                 DSEKQ   +SS  NAG
Sbjct: 1000 SSPQVDQHNLLPSQVKAGTPLQSANSPFVPSPSTPLAPSPIPA-DSEKQLSGLSSLTNAG 1058

Query: 1267 NAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLER 1088
            + GHQQ+   P Q QSL++GTPGISASP LAE+TS DGNQ NVPS + GK++  E+PLER
Sbjct: 1059 HVGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQANVPSVVPGKTNASERPLER 1118

Query: 1087 LIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARNF 908
            LIKVV+S + KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARNF
Sbjct: 1119 LIKVVKSSTPKALSSAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 1178

Query: 907  ISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFESD--LENSELESTATTRIRRYRAEV 734
            +S DGS TTKK +   S MPL+ +SSA S N+SF+    L+ SELESTAT+ ++R + EV
Sbjct: 1179 MSQDGSATTKKIKRNTSAMPLNNVSSAGSVNESFKQSYGLDTSELESTATSHVKRQKIEV 1238

Query: 733  NNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEGTIVKCSFNALAASSNLKSQYAS 554
            N+ALL+E+ EINQ+LIDT + IS+ED DSIAAA++GEGT++KCSF A+A S +LKSQ+AS
Sbjct: 1239 NHALLEEISEINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFAS 1298

Query: 553  AQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQPMSL 374
            +QI PILPLRL VPA+YP CSP+LLDKLP E S E +DLSVKA+ RFSISLRGL QPMSL
Sbjct: 1299 SQISPILPLRLLVPANYPKCSPVLLDKLPDESSGETDDLSVKAKSRFSISLRGLSQPMSL 1358

Query: 373  GEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            GEM +TWD CAR VIAEYAQQ+GGGSFSSRYGAWENCV A
Sbjct: 1359 GEMAKTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1398



 Score =  172 bits (435), Expect = 3e-39
 Identities = 105/267 (39%), Positives = 143/267 (53%), Gaps = 7/267 (2%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            S+DSTA+ G  G  D QEEIYQKIKS KE+Y  +L+E  QK++++ QQ +AL    K ++
Sbjct: 599  SVDSTAQTGHAGVADWQEEIYQKIKSWKEMYYTDLSEFYQKLSLKLQQHDALIPPAKPSE 658

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
              EK+K+FK  L+R +  LQ  K++I P  KEKLP  E+QI N LA     K   SQ  G
Sbjct: 659  QYEKMKTFKTMLERTLVILQISKNNIQPGLKEKLPLYERQIHNVLASTK-KKGIPSQSQG 717

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
             QQ QH  G  H                                              SM
Sbjct: 718  QQQFQHPGGLAHSMPQQQPSQVSQLQQHDNHPNQVQQMNLQVSATSMQPSAVTGMQHVSM 777

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQ-------NTINAPQ 1952
            PL    GVP TQQN+ N+LQ ++NL+S  G +  SL QGA+GS+QQ       +T+NAPQ
Sbjct: 778  PLPTNFGVPTTQQNITNALQPAANLDSVQGSSFNSLQQGAMGSMQQVGVGSVPSTVNAPQ 837

Query: 1951 KTNTGTLSHSTLNQLQPSVNSLPLNSS 1871
            +TN  TLS+S++N LQ + + +  +S+
Sbjct: 838  QTNANTLSNSSMNTLQSNASLVQPSSN 864



 Score =  147 bits (371), Expect = 7e-32
 Identities = 124/349 (35%), Positives = 169/349 (48%), Gaps = 11/349 (3%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPAS-PE---DHAGVASKFEERIYSVAANQRDYLR 4031
            DWR+QLQ + R RII K+++TLKR  P S PE   +   +A +FEE+IYS A +Q DYLR
Sbjct: 40   DWRSQLQHDARLRIINKIMDTLKRHLPISVPEGLNELQKIAVRFEEKIYSAATSQPDYLR 99

Query: 4030 KISMKMMALESKSLNGA--DNSIPSNYVGNQNPSDLAIQGLHSQLCNPGQSL--PMGXXX 3863
            KIS+KM+++E+K+ + A  ++S+P+  + NQNP+D    G      N GQSL  PM    
Sbjct: 100  KISLKMLSMETKTQHTAPINSSMPNTTIPNQNPTDQVSLG------NQGQSLAIPMVNPP 153

Query: 3862 XXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQN 3683
                        N  +        +L +ALSS+TGL Q+ +S+ V Q +NLQ M GISQN
Sbjct: 154  AARQQLLPQNLQNNTS-TAVQSSANLPSALSSITGLGQSNISS-VGQTSNLQNMPGISQN 211

Query: 3682 SINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQQGI 3503
            S++NSVGQ    + ++NAQR M                         QH    Q ++Q +
Sbjct: 212  SVSNSVGQGAAPDIYANAQRQM--QGRQHHQQIISQQQQQSQNQLIYQHQLQQQLMKQKL 269

Query: 3502 MQPPLLQSHM---HQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQS 3332
                LLQ HM    Q                           Q+T +Q QP+ +QSA Q 
Sbjct: 270  QHSSLLQPHMQQQQQQQSLLQPTQLQSSQQSLMQMSSSLQSGQSTIQQTQPTTMQSAAQP 329

Query: 3331 SLIQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQTP 3185
             L QNQ +S+QQ  PS L                    QT  L QQ TP
Sbjct: 330  GLQQNQLNSIQQSVPSLLQQHPQSVARQQQQAQPSMHQQTPSLQQQPTP 378


>ref|XP_010245153.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X2 [Nelumbo nucifera]
          Length = 1386

 Score =  509 bits (1310), Expect = e-140
 Identities = 283/464 (60%), Positives = 324/464 (69%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MNEVN+LKVR G G+K  +F Q H A QR   Y QQLK G+ F +               
Sbjct: 923  MNEVNDLKVRQGMGVKPGIFQQHHSASQRPA-YHQQLKAGASFPISSPQLLQAASPQISQ 981

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                QIDQQ+L ++ +K GTPLQ+ANSP                GDSEKQ+  +SS   A
Sbjct: 982  HSSPQIDQQSLLSSLTKAGTPLQSANSPFVVPSPSPPLAPSPIPGDSEKQTSAVSSLSTA 1041

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN GH Q       AQSL+IGTPGISASPLLAEFT  DGNQG   + +SGKS   EQPLE
Sbjct: 1042 GNIGHPQTSVAIAPAQSLAIGTPGISASPLLAEFTGPDGNQGTASTMISGKSVVTEQPLE 1101

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIKVV+S+S KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARN
Sbjct: 1102 RLIKVVKSMSTKALCASVSDIGSVVCMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1161

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FIS DGS  TKK R     MPL+A+SSA S NDSF+  + LE S+LESTAT+RI+R R E
Sbjct: 1162 FISQDGSSATKKMRRYTIAMPLNAVSSAGSVNDSFKQLNGLETSDLESTATSRIKRPRVE 1221

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAE---GEGTIVKCSFNALAASSNLKS 566
             N+ALL+E+RE NQRLIDT ++ISDED+D    AA    GEGTIVKCSF+A+A S NLKS
Sbjct: 1222 ANHALLEEIRETNQRLIDTVVDISDEDIDPTTGAAVVEGGEGTIVKCSFSAVALSPNLKS 1281

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QYASAQ+ PILP+RL VP +YP CSPILLD+LP E SKE+EDLSVKA+ RFS SLR L Q
Sbjct: 1282 QYASAQMSPILPIRLLVPTNYPKCSPILLDRLPVELSKEYEDLSVKAKSRFSASLRSLSQ 1341

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSL EM +TWD CAR V++EYAQQSGGGSFSSRYG WENCV A
Sbjct: 1342 PMSLWEMAKTWDICARAVVSEYAQQSGGGSFSSRYGTWENCVSA 1385



 Score =  183 bits (464), Expect = 1e-42
 Identities = 112/273 (41%), Positives = 157/273 (57%), Gaps = 12/273 (4%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            S++STA+ G   A DLQEE+YQKIKSMKE+YLPE+ E+ QKI ++CQQ ++LPQ P+++D
Sbjct: 571  SIESTAQTGHANAIDLQEEVYQKIKSMKEMYLPEINEMYQKIALKCQQNDSLPQ-PQKSD 629

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
             +++L+ F+  L+R+I FL   K++ L  YK+KLP LEKQI+  L  N   KP  SQ  G
Sbjct: 630  HVDRLRMFRTMLERIIQFLSVAKTTCL-LYKDKLPLLEKQIVGVLNTNRPKKPVPSQLQG 688

Query: 2290 HQQLQ------HSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2129
             QQLQ      HS+ QP                                           
Sbjct: 689  QQQLQPPGALLHSI-QPQQQQQQQQPQPQIPHLKQQQHDNQMHPQVQPINLQSSVTSMQP 747

Query: 2128 XXSGSM------PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNT 1967
                +M      P+SN++ V   Q N++ SLQ+SSNLE   G+   SL QGA+GSLQQ+T
Sbjct: 748  TSVPTMQHSSIPPVSNHLAVTNAQPNVMTSLQSSSNLEPGQGNAPNSLQQGAVGSLQQST 807

Query: 1966 INAPQKTNTGTLSHSTLNQLQPSVNSLPLNSSI 1868
            ++  Q+TN  TLS S++N LQPS+ SL  N+++
Sbjct: 808  MSTTQQTNITTLSQSSVNTLQPSIGSLQPNTNM 840



 Score =  129 bits (324), Expect = 2e-26
 Identities = 114/361 (31%), Positives = 158/361 (43%), Gaps = 16/361 (4%)
 Frame = -1

Query: 4213 MDSSVDWRTQLQPNFRSRIIEKLLETLKRLFPAS-PE---DHAGVASKFEERIYSVAANQ 4046
            MD+S DWR+QLQP+ R RI+ K+++TLK+  P S PE   +   +A +FEE+IY+ A++Q
Sbjct: 21   MDNS-DWRSQLQPDSRQRIVNKIMDTLKKHLPISGPEGLQELKKIAVRFEEKIYTAASSQ 79

Query: 4045 RDYLRKISMKMMALESKSL-NGADNSIPSNYVG-NQNPSDLAIQGLHSQLCNPGQSLPMG 3872
             DYLRKIS+KM+ +ESKS  N   NS+PSN  G N NP D A Q + SQ+ N GQ LP+ 
Sbjct: 80   SDYLRKISLKMLTMESKSQPNVVPNSLPSNSAGSNPNPVDPASQSMQSQVRNQGQPLPIS 139

Query: 3871 XXXXXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGI 3692
                           N IA         L +A  S++GL+Q  + N   Q   LQ     
Sbjct: 140  MPNQARQQMLSQTVQNNIAPAGVQNSSGLSSAHPSVSGLSQNTVPNRQMQGRQLQ----- 194

Query: 3691 SQNSINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQ 3512
             Q +I   + Q   +  +   Q+                           Q   + Q +Q
Sbjct: 195  -QQAIPQQLQQQPQNPQYIYHQQQQ-----------------------QLQQQFLKQKIQ 230

Query: 3511 QG-IMQPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQAT---------FKQIQ 3362
            QG + Q PL+Q H+ Q                             +          +Q Q
Sbjct: 231  QGNLQQQPLMQPHIQQQQQQQQQQQQQQLLQPTQLQSSQQSLMHISSSLPSSQPPLQQTQ 290

Query: 3361 PSMVQSAPQSSLIQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQTPI 3182
             S++QS P SSL QNQ  S+Q    S L                    Q  VL QQQTP+
Sbjct: 291  SSVIQSTPHSSLQQNQQPSIQPSTASVLQQHPQSVHRQQQQPQQSLHQQAPVLLQQQTPM 350

Query: 3181 N 3179
            +
Sbjct: 351  S 351


>ref|XP_010245151.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X1 [Nelumbo nucifera]
            gi|720090613|ref|XP_010245152.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 15a isoform X1
            [Nelumbo nucifera]
          Length = 1422

 Score =  509 bits (1310), Expect = e-140
 Identities = 283/464 (60%), Positives = 324/464 (69%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MNEVN+LKVR G G+K  +F Q H A QR   Y QQLK G+ F +               
Sbjct: 959  MNEVNDLKVRQGMGVKPGIFQQHHSASQRPA-YHQQLKAGASFPISSPQLLQAASPQISQ 1017

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                QIDQQ+L ++ +K GTPLQ+ANSP                GDSEKQ+  +SS   A
Sbjct: 1018 HSSPQIDQQSLLSSLTKAGTPLQSANSPFVVPSPSPPLAPSPIPGDSEKQTSAVSSLSTA 1077

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN GH Q       AQSL+IGTPGISASPLLAEFT  DGNQG   + +SGKS   EQPLE
Sbjct: 1078 GNIGHPQTSVAIAPAQSLAIGTPGISASPLLAEFTGPDGNQGTASTMISGKSVVTEQPLE 1137

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIKVV+S+S KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARN
Sbjct: 1138 RLIKVVKSMSTKALCASVSDIGSVVCMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1197

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FIS DGS  TKK R     MPL+A+SSA S NDSF+  + LE S+LESTAT+RI+R R E
Sbjct: 1198 FISQDGSSATKKMRRYTIAMPLNAVSSAGSVNDSFKQLNGLETSDLESTATSRIKRPRVE 1257

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAE---GEGTIVKCSFNALAASSNLKS 566
             N+ALL+E+RE NQRLIDT ++ISDED+D    AA    GEGTIVKCSF+A+A S NLKS
Sbjct: 1258 ANHALLEEIRETNQRLIDTVVDISDEDIDPTTGAAVVEGGEGTIVKCSFSAVALSPNLKS 1317

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QYASAQ+ PILP+RL VP +YP CSPILLD+LP E SKE+EDLSVKA+ RFS SLR L Q
Sbjct: 1318 QYASAQMSPILPIRLLVPTNYPKCSPILLDRLPVELSKEYEDLSVKAKSRFSASLRSLSQ 1377

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSL EM +TWD CAR V++EYAQQSGGGSFSSRYG WENCV A
Sbjct: 1378 PMSLWEMAKTWDICARAVVSEYAQQSGGGSFSSRYGTWENCVSA 1421



 Score =  183 bits (464), Expect = 1e-42
 Identities = 112/273 (41%), Positives = 157/273 (57%), Gaps = 12/273 (4%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            S++STA+ G   A DLQEE+YQKIKSMKE+YLPE+ E+ QKI ++CQQ ++LPQ P+++D
Sbjct: 607  SIESTAQTGHANAIDLQEEVYQKIKSMKEMYLPEINEMYQKIALKCQQNDSLPQ-PQKSD 665

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
             +++L+ F+  L+R+I FL   K++ L  YK+KLP LEKQI+  L  N   KP  SQ  G
Sbjct: 666  HVDRLRMFRTMLERIIQFLSVAKTTCL-LYKDKLPLLEKQIVGVLNTNRPKKPVPSQLQG 724

Query: 2290 HQQLQ------HSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2129
             QQLQ      HS+ QP                                           
Sbjct: 725  QQQLQPPGALLHSI-QPQQQQQQQQPQPQIPHLKQQQHDNQMHPQVQPINLQSSVTSMQP 783

Query: 2128 XXSGSM------PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNT 1967
                +M      P+SN++ V   Q N++ SLQ+SSNLE   G+   SL QGA+GSLQQ+T
Sbjct: 784  TSVPTMQHSSIPPVSNHLAVTNAQPNVMTSLQSSSNLEPGQGNAPNSLQQGAVGSLQQST 843

Query: 1966 INAPQKTNTGTLSHSTLNQLQPSVNSLPLNSSI 1868
            ++  Q+TN  TLS S++N LQPS+ SL  N+++
Sbjct: 844  MSTTQQTNITTLSQSSVNTLQPSIGSLQPNTNM 876



 Score =  174 bits (440), Expect = 7e-40
 Identities = 131/370 (35%), Positives = 175/370 (47%), Gaps = 25/370 (6%)
 Frame = -1

Query: 4213 MDSSVDWRTQLQPNFRSRIIEKLLETLKRLFPAS-PE---DHAGVASKFEERIYSVAANQ 4046
            MD+S DWR+QLQP+ R RI+ K+++TLK+  P S PE   +   +A +FEE+IY+ A++Q
Sbjct: 21   MDNS-DWRSQLQPDSRQRIVNKIMDTLKKHLPISGPEGLQELKKIAVRFEEKIYTAASSQ 79

Query: 4045 RDYLRKISMKMMALESKSL-NGADNSIPSNYVG-NQNPSDLAIQGLHSQLCNPGQSLPMG 3872
             DYLRKIS+KM+ +ESKS  N   NS+PSN  G N NP D A Q + SQ+ N GQ LP+ 
Sbjct: 80   SDYLRKISLKMLTMESKSQPNVVPNSLPSNSAGSNPNPVDPASQSMQSQVRNQGQPLPIS 139

Query: 3871 XXXXXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGI 3692
                           N IA         L +A  S++GL+Q  + NV  QN+NL  MSGI
Sbjct: 140  MPNQARQQMLSQTVQNNIAPAGVQNSSGLSSAHPSVSGLSQNTVPNVGGQNSNLPNMSGI 199

Query: 3691 SQNSINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQ 3512
            SQNS++N +GQ V SN F+N+QR M                          +H   Q LQ
Sbjct: 200  SQNSVSNPLGQSVTSNMFANSQRQM--QGRQLQQQAIPQQLQQQPQNPQYIYHQQQQQLQ 257

Query: 3511 Q----------GIMQPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQAT----- 3377
            Q           + Q PL+Q H+ Q                             +     
Sbjct: 258  QQFLKQKIQQGNLQQQPLMQPHIQQQQQQQQQQQQQQLLQPTQLQSSQQSLMHISSSLPS 317

Query: 3376 ----FKQIQPSMVQSAPQSSLIQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTS 3209
                 +Q Q S++QS P SSL QNQ  S+Q    S L                    Q  
Sbjct: 318  SQPPLQQTQSSVIQSTPHSSLQQNQQPSIQPSTASVLQQHPQSVHRQQQQPQQSLHQQAP 377

Query: 3208 VLHQQQTPIN 3179
            VL QQQTP++
Sbjct: 378  VLLQQQTPMS 387


>ref|XP_008812740.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Phoenix dactylifera]
          Length = 1381

 Score =  505 bits (1300), Expect = e-139
 Identities = 279/460 (60%), Positives = 326/460 (70%), Gaps = 2/460 (0%)
 Frame = -1

Query: 1627 NEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXXX 1448
            NE NE KVRPG GIK  L+ Q   AGQR   Y  QLK G+ F +                
Sbjct: 925  NEPNESKVRPGLGIKPGLYQQHFSAGQRPG-YYHQLKQGASFPISSPQNLQSSSPQISHH 983

Query: 1447 XXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNAG 1268
               Q+DQ NL  +  K GTPLQ+ANSP                 DSEK S  +SS  NA 
Sbjct: 984  SSPQVDQHNLLASQVKAGTPLQSANSPFVPSPSTPLAPSPIPA-DSEKLSG-LSSVTNAA 1041

Query: 1267 NAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLER 1088
            + GHQQ+   P Q QSL++GTPGISASP LAE+TS DGNQ  VPS + GK+S  E+PLER
Sbjct: 1042 HVGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQATVPSVVPGKTSASERPLER 1101

Query: 1087 LIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARNF 908
            LIKVV+S + KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARNF
Sbjct: 1102 LIKVVKSSTPKALSSAVSDIESVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 1161

Query: 907  ISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFESD--LENSELESTATTRIRRYRAEV 734
            +S DGS TTKK +   S MPL+ +SSA S NDSF+    L+ SELESTAT+R++R + EV
Sbjct: 1162 MSQDGSATTKKMKRNTSAMPLNNVSSAGSVNDSFKQSYGLDASELESTATSRVKRQKFEV 1221

Query: 733  NNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEGTIVKCSFNALAASSNLKSQYAS 554
            N+ALL+E+REINQ+LIDT + IS+ED DSIAAA++GEGT++KCSF A+A S +LKSQ+AS
Sbjct: 1222 NHALLEEIREINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFAS 1281

Query: 553  AQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQPMSL 374
            +QI PILPLRL VPA+YP CSP+LLDKLP E S E +DLSVKA+ RFSISLRGL QPMSL
Sbjct: 1282 SQISPILPLRLLVPANYPKCSPVLLDKLPDESSGESDDLSVKAKSRFSISLRGLSQPMSL 1341

Query: 373  GEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            GEM +TWD CAR VIAEYAQQ+GGGSFSSRYGAWENCV A
Sbjct: 1342 GEMARTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1381



 Score =  180 bits (457), Expect = 8e-42
 Identities = 105/267 (39%), Positives = 147/267 (55%), Gaps = 7/267 (2%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            S+DSTA+ G  G  DLQEEIYQKIKSM+++Y  ++ EL Q+I ++ QQ +      K ++
Sbjct: 581  SVDSTAQTGHVGVADLQEEIYQKIKSMRDMYFADINELYQRIALKFQQHDGFIPPAKPSE 640

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
              EK+K+FK  L+R ++FLQ  K++I P  K+++P  EKQI+N L  N   K   SQ  G
Sbjct: 641  QYEKMKNFKTMLERTLAFLQISKNNIQPGLKDRIPLYEKQIVNILTSNK-KKVIPSQSQG 699

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
             QQ QH  G  H                                              SM
Sbjct: 700  QQQFQHPGGLAHSMPQQQPSLVPQLQQHDNHPNQVQQMNLQGSATSMQPSAVTGMQHVSM 759

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQ-------NTINAPQ 1952
            PL+   GVPATQQN+ N+LQ ++NL+S  G +  SL QGA+GS+ Q       NTINAPQ
Sbjct: 760  PLTTNFGVPATQQNITNALQPAANLDSVQGSSFNSLQQGAMGSMPQGGVGSVPNTINAPQ 819

Query: 1951 KTNTGTLSHSTLNQLQPSVNSLPLNSS 1871
            +TN  TLS+S++N LQP+ + +  +S+
Sbjct: 820  QTNANTLSNSSMNTLQPNASLVQPSSN 846



 Score =  138 bits (348), Expect = 3e-29
 Identities = 117/350 (33%), Positives = 160/350 (45%), Gaps = 11/350 (3%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPAS-PE---DHAGVASKFEERIYSVAANQRDYLR 4031
            DWR QLQ + R RI+ K+++TLKR  P S PE   +   +A +FEE+IY+ A +Q DYLR
Sbjct: 27   DWRCQLQHDARQRIVNKIMDTLKRHLPISVPEGLNELQKIAVRFEEKIYTAATSQSDYLR 86

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGNQNPSDLAIQGLHSQLCNP----GQSLPMGXXX 3863
            KIS+KM+++E+K+ +     +P+  + NQNP+D   Q L     NP     Q LP     
Sbjct: 87   KISLKMLSMETKTQH--TPPMPNTTIPNQNPTDSG-QPLGIPAVNPPTARQQLLPQNLQN 143

Query: 3862 XXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQN 3683
                                    +L  ALSS TGL+Q+ +S+ V Q +NLQ M GISQN
Sbjct: 144  N--------------TSTSVQSSANLPPALSSFTGLSQSNISS-VGQTSNLQNMPGISQN 188

Query: 3682 SINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQQGI 3503
            S++NSVGQ    + ++NAQR M                               Q L+Q +
Sbjct: 189  SVSNSVGQGAAPDIYANAQRQM--PGRQHQQQMISQQQQQSQNQLIYHQQFQQQLLKQKL 246

Query: 3502 MQPPLLQSHMHQ---HXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQS 3332
              P LLQ H+ Q                              Q+T +Q QP+ +QSA Q 
Sbjct: 247  QHPSLLQPHLQQQQPQQSLLQPTQLQSSQQSLMQMSSGLQSGQSTIQQPQPTTMQSAAQP 306

Query: 3331 SLIQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQTPI 3182
             L QNQ +S+QQ  PS L                    QT  L QQ TP+
Sbjct: 307  GLQQNQLNSIQQSVPSLLQQHPQSVARQQQQVQPSIHQQTPSLQQQPTPV 356


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  487 bits (1254), Expect = e-134
 Identities = 272/464 (58%), Positives = 318/464 (68%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN+LK+RPG G+K  +F Q   AGQR T   QQ+K G+ F +               
Sbjct: 918  MNDVNDLKIRPGMGVKPGVFQQHLSAGQRTTYPHQQMKPGASFPISSPQLLQAASPQLTQ 977

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                QIDQQNL ++ +K GTPLQ+ANSP                GDSEK    ISS  NA
Sbjct: 978  HSSPQIDQQNLLSSLTKTGTPLQSANSPFVVQSPSTPLAPSPMPGDSEKPITGISSLSNA 1037

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN G QQA        SL+IGTPGISASPLLAEFT  D    N  +  SGKS+  EQPLE
Sbjct: 1038 GNIGQQQATVAQAPVPSLAIGTPGISASPLLAEFTGSDVGLANTLTTASGKSTVTEQPLE 1097

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIK V+S+S KA              ID IA SAPGNGSRAA GEDLVAMT C LQARN
Sbjct: 1098 RLIKAVKSMSPKALSASVSDIGSVVSMIDRIASSAPGNGSRAAVGEDLVAMTNCRLQARN 1157

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FI+ DG   T+K R   S MPL+ +SSA S +DSF+  +  E SELESTAT+ ++R R E
Sbjct: 1158 FITQDGMSGTRKMRRYTSAMPLNVVSSASSISDSFKQFNGAETSELESTATSSVKRPRLE 1217

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAE---GEGTIVKCSFNALAASSNLKS 566
             N+ALL+E+REINQRLIDT ++IS+EDVD  A AA    GEGTIVKCSF+A+A S NLKS
Sbjct: 1218 ANHALLEEIREINQRLIDTVVDISEEDVDPTAGAATAGGGEGTIVKCSFSAVALSPNLKS 1277

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QYASAQ+ PI PLRL VP +YPNCSPILLDKLP E SKE+EDLSVKA+ RF+ISLR L Q
Sbjct: 1278 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKLPVEVSKEYEDLSVKAKSRFNISLRSLSQ 1337

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSLGE+ +TWD CAR VI+E+AQQSGGGSFSS+YG WENC+ A
Sbjct: 1338 PMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1381



 Score =  177 bits (448), Expect = 9e-41
 Identities = 123/319 (38%), Positives = 160/319 (50%), Gaps = 12/319 (3%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASP----EDHAGVASKFEERIYSVAANQRDYLR 4031
            DWR  LQP+ R RI+ K++ETLKR  P S     E+   +A +FEE+IY+ A +Q DYLR
Sbjct: 21   DWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRFEEKIYTAATSQSDYLR 80

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGNQN--PSDLAIQGLHSQLCNPGQSLPM---GXX 3866
            KIS+KM+ +ESKS N   NS+P N  GN N  P   A Q +  Q+ N GQSLP+      
Sbjct: 81   KISLKMLTMESKSQNNVPNSVPPNPFGNNNRPPDPGASQSMQPQVHNQGQSLPVPLSANQ 140

Query: 3865 XXXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQ 3686
                         N +A         L +AL  ++GL QT++ NVV QN+N+Q +SG+ Q
Sbjct: 141  TQTRQQLLSQNIQNNMASTGIQSSAGLTSALPPVSGLAQTSIPNVVGQNSNMQNISGVPQ 200

Query: 3685 NSINNSVGQLVPSNTFSNAQRHM--XXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQ 3512
            NS  NS+GQ VPSN F+N+QR M                           Q   M Q  Q
Sbjct: 201  NSAGNSLGQGVPSNMFANSQRQMPRQQVVPQQQQQQSQNPTQYMYQQQQIQQQLMKQKFQ 260

Query: 3511 QGIMQP-PLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQ 3335
            QG + P  L+QSH+ Q                             T   +QPS++QSAP 
Sbjct: 261  QGNLPPNNLVQSHLQQQ-----QQQQQQNLLQPAQLQSSQQSSMQTSSVMQPSLMQSAPL 315

Query: 3334 SSLIQNQPSSVQQPRPSGL 3278
            S L QNQPS+VQQ   S L
Sbjct: 316  SGLQQNQPSTVQQSAQSML 334



 Score =  171 bits (433), Expect = 5e-39
 Identities = 105/262 (40%), Positives = 150/262 (57%), Gaps = 1/262 (0%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDSTA+ G   A D+QEE+YQKIK+MKE+Y PEL E+  KI  + QQ ++LPQ PK T+
Sbjct: 593  SLDSTAQTGHANAVDVQEEVYQKIKAMKEMYFPELNEMYHKIATKLQQHDSLPQPPK-TE 651

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
             +EKL+ FK  L+R+I+FLQ PKSS++P+++EKL   EKQIIN++  N   +   S Q G
Sbjct: 652  QLEKLRLFKSMLERIITFLQVPKSSVMPSFREKLGSYEKQIINFINTNRPKRQITSMQQG 711

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
             Q  Q  + QP                                                 
Sbjct: 712  -QLSQPQIQQPQSQVPQVQSHESQMNPQMQSMNMQGSVQTMQQNNMSSLQ--------QT 762

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNTINAPQKTNTGTL 1931
            PL +  GV ++QQ+M++S+Q++SNL+S  G+ + SL QG LGS QQN +++ Q+ N   L
Sbjct: 763  PLPSLSGVSSSQQSMMSSMQSASNLDSVQGNVMSSLQQGGLGSHQQNPVSSAQQANIPNL 822

Query: 1930 -SHSTLNQLQPSVNSLPLNSSI 1868
             S S +N LQP++ SL  NS++
Sbjct: 823  SSQSGVNMLQPNI-SLQSNSNM 843


>ref|XP_010097158.1| hypothetical protein L484_025703 [Morus notabilis]
            gi|587878218|gb|EXB67225.1| hypothetical protein
            L484_025703 [Morus notabilis]
          Length = 1396

 Score =  485 bits (1249), Expect = e-133
 Identities = 274/464 (59%), Positives = 322/464 (69%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN++K+R    +K  +F Q   AGQR     QQLKTGSPFSV               
Sbjct: 933  MNDVNDMKMRQNMAVKPGVFQQHVPAGQRSAYPHQQLKTGSPFSVPSNHLQASSPQVLQH 992

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                 +DQQNL ++ +K GTPLQ+ANSP                GDS+K    ISS PNA
Sbjct: 993  SSPQ-VDQQNLLSSLTKAGTPLQSANSPFVVPSPSTPLAPSPMPGDSDKPVPGISSLPNA 1051

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN G QQA  G   A SL+IGTPGISASPLLAEF+S DG  GNV S++SGKSS  EQPL 
Sbjct: 1052 GNVGQQQASGGVAPAPSLAIGTPGISASPLLAEFSSPDGIHGNVLSSVSGKSSVTEQPLG 1111

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIK V+S+S  A              ID IAGSAPGNGSRAA GEDLVAMTKC LQ RN
Sbjct: 1112 RLIKAVKSMSPTALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQVRN 1171

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FI+ DG+  T+K +   S MPL+ +SSA S NDSF+  +  E SELESTAT+ I+R + E
Sbjct: 1172 FITQDGTNGTRKMKRYTSAMPLNVVSSASSINDSFKQFNGSETSELESTATSGIKRPKIE 1231

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAE---GEGTIVKCSFNALAASSNLKS 566
             N+ALL+E+REINQRLIDT ++ISDEDVD  AAAA    GEGTIVKCSF+A+A S NLKS
Sbjct: 1232 ANHALLEEIREINQRLIDTVVDISDEDVDPSAAAAAVEGGEGTIVKCSFSAVALSPNLKS 1291

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QYASA++ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+ +FS  LR L Q
Sbjct: 1292 QYASARMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSKFSTFLRSLSQ 1351

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSLG + +TWD CAR VI+E+AQQSGGGSFSS+YG WENC+ A
Sbjct: 1352 PMSLGAIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1395



 Score =  166 bits (420), Expect = 2e-37
 Identities = 111/311 (35%), Positives = 158/311 (50%), Gaps = 5/311 (1%)
 Frame = -1

Query: 4204 SVDWRTQLQPNFRSRIIEKLLETLKRLFPASPEDHAG----VASKFEERIYSVAANQRDY 4037
            +VDWRTQLQP+ R RI+ K+++TLK+  P S ++       +A +FEE+IY+ A +Q DY
Sbjct: 18   AVDWRTQLQPDSRQRIVNKIMDTLKKHLPFSGQEGLHELKKIAERFEEKIYTAATSQSDY 77

Query: 4036 LRKISMKMMALESKSLNGADNSIPSNYVGNQN-PSDLAIQGLHSQLCNPGQSLPMGXXXX 3860
            LRKIS+KM+ +E+KS N   NS+P+N V N N P D    G+ SQ+ N GQSL M     
Sbjct: 78   LRKISLKMLTMETKSQNSIPNSLPTNPVSNNNRPPDPGSLGMQSQIHNQGQSLAMPLQPN 137

Query: 3859 XXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQNS 3680
                       N           +L  AL   + L+QT++ +VV QN N+Q M G SQN+
Sbjct: 138  QSQTRPQLLPQNIQNSGGVQSSSTLSPALPPPSSLSQTSIPSVVGQNPNMQNMPGTSQNT 197

Query: 3679 INNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQQGIM 3500
            + NS+GQ VP+N ++++QR +                         Q   +    QQG +
Sbjct: 198  VGNSMGQGVPANMYASSQRQV-HGRPQVVPQQQQQSQNAQQYNMYQQQQLLKPKFQQGNI 256

Query: 3499 QPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQSSLIQ 3320
              P++QSHM Q                             T   +QP+M+QS+  S L  
Sbjct: 257  PQPMMQSHMQQQ--------QQPNLLQPTQLQSSQQAVIQTSAAMQPNMMQSS-LSGLQP 307

Query: 3319 NQPSSVQQPRP 3287
            NQPSSVQQ +P
Sbjct: 308  NQPSSVQQSKP 318



 Score =  150 bits (379), Expect = 9e-33
 Identities = 105/297 (35%), Positives = 144/297 (48%), Gaps = 36/297 (12%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQL----------- 2504
            SLDSTA+ G    +D  +E+YQKIK+MKE YLPEL E+ QKI  + QQ            
Sbjct: 572  SLDSTAQTGHANVSD--DEVYQKIKAMKEQYLPELNEMYQKIAAKLQQACPFFYLLQFIY 629

Query: 2503 ---------------EALPQHPKQTDAIEKLKSFKISLDRMISFLQFPKSSILPTYKEKL 2369
                           ++LPQ PK +D  EK+K FK  L+R I+FLQ PK SILP YK+KL
Sbjct: 630  TNKFASIFGNFRLIQDSLPQQPK-SDQYEKIKLFKTMLERAITFLQVPKGSILPGYKDKL 688

Query: 2368 PQLEKQIINYLAKNGCTKPAASQQPGH---------QQLQHSVGQPHXXXXXXXXXXXXX 2216
               EKQI+N++  +   KP +  Q G          QQ Q  + Q H             
Sbjct: 689  AHYEKQIVNFINTHRPRKPVSQLQQGQVSSTHMHTMQQPQSQIAQVHSHENQMNPQLQSM 748

Query: 2215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSMPLSNYMGVPATQQNMINSLQTSSNL 2036
                                                +S   GV   QQN++NSLQ +SN+
Sbjct: 749  NAQGSVATMQQNNMTSLQ---------------QSSISTLSGVSTPQQNVMNSLQPNSNM 793

Query: 2035 ESTLGHTLRSLPQGALGSLQQNTINAPQKTNTGTL-SHSTLNQLQPSVNSLPLNSSI 1868
            +S  G++L SL Q ++GS+QQN ++AP + N   L S + +N LQ S+N+L  NS +
Sbjct: 794  DSGQGNSLNSLQQVSVGSMQQNPVSAPPQGNINALSSQNGMNVLQSSINTLQPNSGM 850


>ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            [Vitis vinifera]
          Length = 1333

 Score =  485 bits (1248), Expect = e-133
 Identities = 273/465 (58%), Positives = 317/465 (68%), Gaps = 6/465 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN+LK+R G           H    +++ Y QQLK+G+ F +               
Sbjct: 868  MNDVNDLKMRQGMSANKPGVFHQHQGAVQRSAYPQQLKSGTSFPISSPQLLQTASPQIPQ 927

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                QIDQQNL T+ +K GTPLQ+ANSP                G+SEK +  IS   NA
Sbjct: 928  HSSPQIDQQNLLTSLTKAGTPLQSANSPFVVPSPSTPLAPSPMPGESEKLNSGISLITNA 987

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN GH Q         SL+IGTPGISASPLLAEFTSLDGN GN  + +SGKSS  EQPLE
Sbjct: 988  GNIGHHQTTGALAPPPSLAIGTPGISASPLLAEFTSLDGNHGNASTMVSGKSSVTEQPLE 1047

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIKVV+ +S KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARN
Sbjct: 1048 RLIKVVKLMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1107

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FI+ DG+  T+K R   S MPL+ +SSA S NDSF+  +  E S+LESTAT+  +R R E
Sbjct: 1108 FITLDGAAGTRKMRRYTSAMPLNVVSSAGSVNDSFKQLAGSETSDLESTATSSAKRPRIE 1167

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAE----GEGTIVKCSFNALAASSNLK 569
            VN+ALL+E+REINQRLIDT ++IS EDVD  AAAA     GEGTIVKCSF+A+A S NLK
Sbjct: 1168 VNHALLEEIREINQRLIDTVVDISHEDVDPAAAAAAAAEGGEGTIVKCSFSAVALSPNLK 1227

Query: 568  SQYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLL 389
            SQY S Q+ PI PLRL VP +YPN SPILLDK P E SKE+EDLSVKA+ RFSISLR L 
Sbjct: 1228 SQYTSTQMSPIQPLRLLVPTNYPNSSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLS 1287

Query: 388  QPMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            QPMSLGE+ +TWD CAR VI+EYAQQSGGGSFSSRYGAWENC+ A
Sbjct: 1288 QPMSLGEIARTWDVCARAVISEYAQQSGGGSFSSRYGAWENCLSA 1332



 Score =  173 bits (438), Expect = 1e-39
 Identities = 111/276 (40%), Positives = 150/276 (54%), Gaps = 15/276 (5%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDSTA+ G     D QEE+YQKIK MKE+YLP+L E+ QKI  + QQ ++LPQ PK T+
Sbjct: 550  SLDSTAQTGTINVGDWQEEVYQKIKRMKEMYLPDLNEMHQKIAAKLQQHDSLPQQPK-TE 608

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPA------ 2309
             +EKLK FK  L+RMI+ LQ  K+SI P +KEKL   EKQI++++  +   KP       
Sbjct: 609  QLEKLKIFKAMLERMITVLQLSKNSITPNFKEKLIGYEKQIVSFINTHRPRKPVPPLQHG 668

Query: 2308 --------ASQQPGHQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2153
                    + QQP   Q Q S GQPH                                  
Sbjct: 669  QSSVSHMHSMQQPQQSQSQLSQGQPH---------------ENQMNPQLQPMNLQGSVAT 713

Query: 2152 XXXXXXXXXXSGSMPLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQ 1973
                        SMP  +  G+P  QQN++NSLQ+S+NL+S  G+ L SL Q A+G+LQQ
Sbjct: 714  MQQNNVPSLQPSSMP--SLSGLPNAQQNIMNSLQSSANLDSGQGNALTSLQQAAVGALQQ 771

Query: 1972 NTINAPQKTNTGTL-SHSTLNQLQPSVNSLPLNSSI 1868
            N ++APQ+ N   L S + +N LQ ++N L  NS++
Sbjct: 772  NPVSAPQQANINNLSSQNGVNVLQQNINQLQPNSNM 807



 Score =  161 bits (407), Expect = 5e-36
 Identities = 121/346 (34%), Positives = 158/346 (45%), Gaps = 9/346 (2%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDHAG----VASKFEERIYSVAANQRDYLR 4031
            DWRTQL P+ R   + ++++TLKR  P S ++       +A +FEE+IY+ A +Q DYLR
Sbjct: 19   DWRTQLSPDSRQGTVNRIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQSDYLR 78

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGN-QNPSDLAIQGLHSQLCNPGQSLP--MGXXXX 3860
            KIS+KM+ +E+KS     +++PSN  GN +NP D A   +  Q+ N GQ LP  +     
Sbjct: 79   KISLKMLTMETKSQTAMPSNLPSNSAGNSKNPPDPASHSMQPQVHNQGQQLPVPLAPNQS 138

Query: 3859 XXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQNS 3680
                                   SL + LSS+T L QT M NVV QN+ +Q +SGI QNS
Sbjct: 139  QTRQQLLAQNIQTNIASGVPSSASLPSTLSSVTSLNQTPMQNVVGQNSGMQNISGIPQNS 198

Query: 3679 INNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQ--HHTMNQNLQQG 3506
            + NS+GQ VPSN F+N+QR                           Q  HH + Q  QQ 
Sbjct: 199  VGNSMGQGVPSNMFANSQRQSQGRPQVVPQQQQQQSQSSQQYIYQQQLQHHLLKQKYQQQ 258

Query: 3505 IMQPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQSSL 3326
              Q  LLQS+  Q                                    S +QSAP S L
Sbjct: 259  QQQQTLLQSNQFQSSQQSVMQ--------------------------TSSGMQSAPLSGL 292

Query: 3325 IQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQT 3188
             QNQPSSVQQ   S L                    QT V+HQQQT
Sbjct: 293  QQNQPSSVQQSSQSVL-----QQHPPAVLRQQQQPQQTPVMHQQQT 333


>ref|XP_009348727.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X3 [Pyrus x bretschneideri]
          Length = 904

 Score =  484 bits (1245), Expect = e-133
 Identities = 274/463 (59%), Positives = 323/463 (69%), Gaps = 4/463 (0%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+ N+LK+R G G+K  +F Q   +GQR   +QQ LK+GSPF +               
Sbjct: 447  MNDANDLKMRQGMGVKPGVFQQHMSSGQRAYPHQQ-LKSGSPFPIPSSNQLLQAASPQIS 505

Query: 1450 XXXXQ-IDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPN 1274
                  +DQQNL T P K GTPLQTA SP                GDSEK S    S PN
Sbjct: 506  QHSSPQVDQQNLLTHP-KAGTPLQTAGSPFVIPSPSTPMAPSPMPGDSEKPS----SLPN 560

Query: 1273 AGNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPL 1094
            AGN GHQQA       QSL+IGTPGISASPLLAEF+  DG+  N  S +SGKSS  EQPL
Sbjct: 561  AGNIGHQQAAGVGAPVQSLAIGTPGISASPLLAEFSGPDGSHVNALSTISGKSSVTEQPL 620

Query: 1093 ERLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQAR 914
            ERLIK V+S+S  A              +D IAGSAPGNGSRAA GEDLVAMTKC LQAR
Sbjct: 621  ERLIKAVKSMSPNALSASVSDIGSVVSMVDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 680

Query: 913  NFISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFES--DLENSELESTATTRIRRYRA 740
            N ++HDGS  T+K R  AS MPL+ +SSA S N+SF+   + E S+LESTAT+RI+R R 
Sbjct: 681  NVMTHDGSNGTRKMRRYASAMPLNVVSSAGSMNESFKQLINSETSDLESTATSRIKRPRV 740

Query: 739  EVNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEG-EGTIVKCSFNALAASSNLKSQ 563
            E N+ALL+E+REIN+ LIDT ++ISDEDVD  AAAAEG EGT+VKCSF+A+A S +LKSQ
Sbjct: 741  EANHALLEEIREINRLLIDTVVDISDEDVDPSAAAAEGGEGTLVKCSFDAVALSPSLKSQ 800

Query: 562  YASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQP 383
            YASAQ+ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+  FSISLR + QP
Sbjct: 801  YASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSVKAKSMFSISLRSISQP 860

Query: 382  MSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            MSLGE+ +TWD CAR VI+E+AQQSGGGSFSS+YG WENC+ A
Sbjct: 861  MSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 903



 Score =  160 bits (404), Expect = 1e-35
 Identities = 102/263 (38%), Positives = 137/263 (52%), Gaps = 1/263 (0%)
 Frame = -1

Query: 2653 ASLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQT 2474
            ASLDS+A+ G     D QEE+YQKIK MKE YLPEL+E+  KI  + QQ ++LPQ PK +
Sbjct: 115  ASLDSSAQTGHANGGDWQEEVYQKIKVMKEKYLPELSEMYHKIATKLQQHDSLPQQPK-S 173

Query: 2473 DAIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQP 2294
            + +EKLK FK  L+R+IS LQ  KS+I P  K+KL   EKQI+N++  N   K     Q 
Sbjct: 174  EQLEKLKMFKTMLERLISILQVSKSNISPGLKDKLGLYEKQIVNFINTNRPRKQGPPLQQ 233

Query: 2293 GHQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGS 2114
            G       +  PH                                               
Sbjct: 234  G------QLPPPHLHSMQQPQSQIPQVQSHENQMNPQLQTMNLQGSVPTMQQNNMTSLQQ 287

Query: 2113 MPLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNTINAPQKTN-TG 1937
              +S+  GV   QQNM+NSLQ S+NL+S  G+ L SL Q  +GS+QQ  ++APQ  N  G
Sbjct: 288  NSMSSISGVSTAQQNMMNSLQPSTNLDSGQGNALNSLQQVPVGSIQQTPVSAPQLANMNG 347

Query: 1936 TLSHSTLNQLQPSVNSLPLNSSI 1868
              S + ++ LQP++NSL  NS +
Sbjct: 348  LSSQNGVSMLQPNINSLQSNSGM 370



 Score = 91.3 bits (225), Expect = 6e-15
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 5/96 (5%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDH----AGVASKFEERIYSVAANQRDYLR 4031
            DWR+QLQ + R RI+ K+++TLKR  P S +D     + +A +FEE+IY+ A +Q DYLR
Sbjct: 20   DWRSQLQADSRQRIVNKIMDTLKRHLPFSGQDGLQELSKIAVRFEEKIYTAATSQSDYLR 79

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGNQN-PSDLA 3926
            KIS+KM+ +E+KS N   N + SN  GN N P D A
Sbjct: 80   KISLKMLTMETKSQNSTGNPLQSNSAGNSNRPPDQA 115


>ref|XP_009348726.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X2 [Pyrus x bretschneideri]
          Length = 1124

 Score =  484 bits (1245), Expect = e-133
 Identities = 274/463 (59%), Positives = 323/463 (69%), Gaps = 4/463 (0%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+ N+LK+R G G+K  +F Q   +GQR   +QQ LK+GSPF +               
Sbjct: 667  MNDANDLKMRQGMGVKPGVFQQHMSSGQRAYPHQQ-LKSGSPFPIPSSNQLLQAASPQIS 725

Query: 1450 XXXXQ-IDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPN 1274
                  +DQQNL T P K GTPLQTA SP                GDSEK S    S PN
Sbjct: 726  QHSSPQVDQQNLLTHP-KAGTPLQTAGSPFVIPSPSTPMAPSPMPGDSEKPS----SLPN 780

Query: 1273 AGNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPL 1094
            AGN GHQQA       QSL+IGTPGISASPLLAEF+  DG+  N  S +SGKSS  EQPL
Sbjct: 781  AGNIGHQQAAGVGAPVQSLAIGTPGISASPLLAEFSGPDGSHVNALSTISGKSSVTEQPL 840

Query: 1093 ERLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQAR 914
            ERLIK V+S+S  A              +D IAGSAPGNGSRAA GEDLVAMTKC LQAR
Sbjct: 841  ERLIKAVKSMSPNALSASVSDIGSVVSMVDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 900

Query: 913  NFISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFES--DLENSELESTATTRIRRYRA 740
            N ++HDGS  T+K R  AS MPL+ +SSA S N+SF+   + E S+LESTAT+RI+R R 
Sbjct: 901  NVMTHDGSNGTRKMRRYASAMPLNVVSSAGSMNESFKQLINSETSDLESTATSRIKRPRV 960

Query: 739  EVNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEG-EGTIVKCSFNALAASSNLKSQ 563
            E N+ALL+E+REIN+ LIDT ++ISDEDVD  AAAAEG EGT+VKCSF+A+A S +LKSQ
Sbjct: 961  EANHALLEEIREINRLLIDTVVDISDEDVDPSAAAAEGGEGTLVKCSFDAVALSPSLKSQ 1020

Query: 562  YASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQP 383
            YASAQ+ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+  FSISLR + QP
Sbjct: 1021 YASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSVKAKSMFSISLRSISQP 1080

Query: 382  MSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            MSLGE+ +TWD CAR VI+E+AQQSGGGSFSS+YG WENC+ A
Sbjct: 1081 MSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1123



 Score =  158 bits (400), Expect = 3e-35
 Identities = 101/262 (38%), Positives = 136/262 (51%), Gaps = 1/262 (0%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDS+A+ G     D QEE+YQKIK MKE YLPEL+E+  KI  + QQ ++LPQ PK ++
Sbjct: 336  SLDSSAQTGHANGGDWQEEVYQKIKVMKEKYLPELSEMYHKIATKLQQHDSLPQQPK-SE 394

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
             +EKLK FK  L+R+IS LQ  KS+I P  K+KL   EKQI+N++  N   K     Q G
Sbjct: 395  QLEKLKMFKTMLERLISILQVSKSNISPGLKDKLGLYEKQIVNFINTNRPRKQGPPLQQG 454

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
                   +  PH                                                
Sbjct: 455  ------QLPPPHLHSMQQPQSQIPQVQSHENQMNPQLQTMNLQGSVPTMQQNNMTSLQQN 508

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNTINAPQKTN-TGT 1934
             +S+  GV   QQNM+NSLQ S+NL+S  G+ L SL Q  +GS+QQ  ++APQ  N  G 
Sbjct: 509  SMSSISGVSTAQQNMMNSLQPSTNLDSGQGNALNSLQQVPVGSIQQTPVSAPQLANMNGL 568

Query: 1933 LSHSTLNQLQPSVNSLPLNSSI 1868
             S + ++ LQP++NSL  NS +
Sbjct: 569  SSQNGVSMLQPNINSLQSNSGM 590



 Score = 87.4 bits (215), Expect = 9e-14
 Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDH----AGVASKFEERIYSVAANQRDYLR 4031
            DWR+QLQ + R RI+ K+++TLKR  P S +D     + +A +FEE+IY+ A +Q DYLR
Sbjct: 20   DWRSQLQADSRQRIVNKIMDTLKRHLPFSGQDGLQELSKIAVRFEEKIYTAATSQSDYLR 79

Query: 4030 KISMKMMALESKSLN---GADNSIPSNYVGNQNPSDLAIQGLHSQLCNPGQSLPM 3875
            KIS+KM+ +E+KS N   G  N  P        P  +  QG+  Q+ N GQSL M
Sbjct: 80   KISLKMLTMETKSQNFSAGNSNRPPDPGSFGMQP-QVPNQGMQPQVPNHGQSLSM 133


>ref|XP_009348724.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Pyrus x bretschneideri]
          Length = 1202

 Score =  484 bits (1245), Expect = e-133
 Identities = 274/463 (59%), Positives = 323/463 (69%), Gaps = 4/463 (0%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+ N+LK+R G G+K  +F Q   +GQR   +QQ LK+GSPF +               
Sbjct: 745  MNDANDLKMRQGMGVKPGVFQQHMSSGQRAYPHQQ-LKSGSPFPIPSSNQLLQAASPQIS 803

Query: 1450 XXXXQ-IDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPN 1274
                  +DQQNL T P K GTPLQTA SP                GDSEK S    S PN
Sbjct: 804  QHSSPQVDQQNLLTHP-KAGTPLQTAGSPFVIPSPSTPMAPSPMPGDSEKPS----SLPN 858

Query: 1273 AGNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPL 1094
            AGN GHQQA       QSL+IGTPGISASPLLAEF+  DG+  N  S +SGKSS  EQPL
Sbjct: 859  AGNIGHQQAAGVGAPVQSLAIGTPGISASPLLAEFSGPDGSHVNALSTISGKSSVTEQPL 918

Query: 1093 ERLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQAR 914
            ERLIK V+S+S  A              +D IAGSAPGNGSRAA GEDLVAMTKC LQAR
Sbjct: 919  ERLIKAVKSMSPNALSASVSDIGSVVSMVDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 978

Query: 913  NFISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFES--DLENSELESTATTRIRRYRA 740
            N ++HDGS  T+K R  AS MPL+ +SSA S N+SF+   + E S+LESTAT+RI+R R 
Sbjct: 979  NVMTHDGSNGTRKMRRYASAMPLNVVSSAGSMNESFKQLINSETSDLESTATSRIKRPRV 1038

Query: 739  EVNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEG-EGTIVKCSFNALAASSNLKSQ 563
            E N+ALL+E+REIN+ LIDT ++ISDEDVD  AAAAEG EGT+VKCSF+A+A S +LKSQ
Sbjct: 1039 EANHALLEEIREINRLLIDTVVDISDEDVDPSAAAAEGGEGTLVKCSFDAVALSPSLKSQ 1098

Query: 562  YASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQP 383
            YASAQ+ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+  FSISLR + QP
Sbjct: 1099 YASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSVKAKSMFSISLRSISQP 1158

Query: 382  MSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            MSLGE+ +TWD CAR VI+E+AQQSGGGSFSS+YG WENC+ A
Sbjct: 1159 MSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1201



 Score =  158 bits (400), Expect = 3e-35
 Identities = 101/262 (38%), Positives = 136/262 (51%), Gaps = 1/262 (0%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDS+A+ G     D QEE+YQKIK MKE YLPEL+E+  KI  + QQ ++LPQ PK ++
Sbjct: 414  SLDSSAQTGHANGGDWQEEVYQKIKVMKEKYLPELSEMYHKIATKLQQHDSLPQQPK-SE 472

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
             +EKLK FK  L+R+IS LQ  KS+I P  K+KL   EKQI+N++  N   K     Q G
Sbjct: 473  QLEKLKMFKTMLERLISILQVSKSNISPGLKDKLGLYEKQIVNFINTNRPRKQGPPLQQG 532

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
                   +  PH                                                
Sbjct: 533  ------QLPPPHLHSMQQPQSQIPQVQSHENQMNPQLQTMNLQGSVPTMQQNNMTSLQQN 586

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNTINAPQKTN-TGT 1934
             +S+  GV   QQNM+NSLQ S+NL+S  G+ L SL Q  +GS+QQ  ++APQ  N  G 
Sbjct: 587  SMSSISGVSTAQQNMMNSLQPSTNLDSGQGNALNSLQQVPVGSIQQTPVSAPQLANMNGL 646

Query: 1933 LSHSTLNQLQPSVNSLPLNSSI 1868
             S + ++ LQP++NSL  NS +
Sbjct: 647  SSQNGVSMLQPNINSLQSNSGM 668


>ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Citrus sinensis]
          Length = 1378

 Score =  483 bits (1243), Expect = e-133
 Identities = 271/464 (58%), Positives = 314/464 (67%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN+LK+R G  +K  +F Q   +GQR     Q LK G+ FS+               
Sbjct: 914  MNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFSISSPQLLQTASPQIPQ 973

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                Q+DQQNL  + +K GTPLQ  NSP                GDSEK    ISS  NA
Sbjct: 974  HSSPQVDQQNLLQSITKSGTPLQPVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNA 1033

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN GHQQ       A SL+IGTPGISASPLLAEFT  DG  GN  + +S K+S  EQPLE
Sbjct: 1034 GNIGHQQTSSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLE 1093

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIK V+S+S KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARN
Sbjct: 1094 RLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1153

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FI+ DGS   +K R   S MPL  +SSA S NDSF+  +  E S+LESTAT+ I+R R E
Sbjct: 1154 FITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRIE 1213

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEG---TIVKCSFNALAASSNLKS 566
             N+ALL+E+REINQRLIDT ++ISDED D  AA + GEG   T+VKCSF+A+A S NLKS
Sbjct: 1214 ANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKS 1273

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QYASAQ+ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+ RFSISLR L Q
Sbjct: 1274 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQ 1333

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSLGE+ +TWD CAR VI+EYAQQSGGGSFSS+YG WENC+ A
Sbjct: 1334 PMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1377



 Score =  176 bits (445), Expect = 2e-40
 Identities = 113/274 (41%), Positives = 152/274 (55%), Gaps = 13/274 (4%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDST + GQ    D QEE+YQKIK+MKE+YLPEL E+ QKI  + QQ ++LPQ PK +D
Sbjct: 583  SLDSTHQTGQANGVDWQEEVYQKIKTMKEMYLPELNEMYQKIAAKLQQHDSLPQQPK-SD 641

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQ-- 2297
             +EKLK FK  L+R+I+FLQ  KS+ILP +KEKL   EKQI+N+++ N   KP +S Q  
Sbjct: 642  QLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQ 701

Query: 2296 ----PGH------QQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2147
                P H      QQ Q S GQPH                                    
Sbjct: 702  GQLPPTHMHSMQQQQSQISQGQPH---------------DNQMNSQIQSMNLAGSMVTMQ 746

Query: 2146 XXXXXXXXSGSMPLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNT 1967
                      S+P  +  GV  +QQNM+NS+Q   N++S  G +L S+ Q   GSLQQN+
Sbjct: 747  QNNVTNVQHNSVP--SVSGVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSLQQNS 804

Query: 1966 INAPQKTNTGTL-SHSTLNQLQPSVNSLPLNSSI 1868
            ++APQ+ +   L S S +N LQ ++N L  NS++
Sbjct: 805  VSAPQQASINNLPSQSGVNMLQSNINPLQSNSNM 838



 Score =  162 bits (411), Expect = 2e-36
 Identities = 121/350 (34%), Positives = 170/350 (48%), Gaps = 11/350 (3%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDHAG----VASKFEERIYSVAANQRDYLR 4031
            DWRTQLQP+ R RI+ K+++TLKR  P S +D       +A +FEE+IY+ A++Q DYLR
Sbjct: 21   DWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDYLR 80

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGNQN--PSDLAIQGLHSQLCNPGQSLPM---GXX 3866
            KIS+KM+++ESKS N   NS+ SN  G+ N  P  +++Q   +Q+ N GQSLP+      
Sbjct: 81   KISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPVSMQ---NQVHNQGQSLPIPLSANQ 137

Query: 3865 XXXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQ 3686
                         N +          L +AL S++GL+Q+ + +VV Q  N+Q MSGISQ
Sbjct: 138  SQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQNMSGISQ 197

Query: 3685 NSINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQH--HTMNQNLQ 3512
            NS  NS+GQ VPSN F+N+QR +                         Q+    +N+ LQ
Sbjct: 198  NSGGNSMGQGVPSNLFANSQRQIQGRQQVLPQQQQQQSQNSQQFLYHQQYPQQPLNKKLQ 257

Query: 3511 QGIMQPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQS 3332
            QG +   L+Q  + Q                                 + P+M+QSAP  
Sbjct: 258  QGGLSHTLMQPQIQQQPQQQPNLLQPNQLQSSQQSGMQT-------SSVMPNMMQSAPLP 310

Query: 3331 SLIQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQTPI 3182
             L QNQ SSVQQ     +                    QT  +HQQQTP+
Sbjct: 311  GLQQNQQSSVQQSTQPMM-----QQHPQSVLRPQQQQQQTVGIHQQQTPM 355


>ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
            gi|557529486|gb|ESR40736.1| hypothetical protein
            CICLE_v10024717mg [Citrus clementina]
          Length = 1383

 Score =  483 bits (1242), Expect = e-133
 Identities = 270/464 (58%), Positives = 314/464 (67%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN+LK+R G  +K  +F Q   +GQR     Q LK G+ F +               
Sbjct: 919  MNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPISSPQLLQTASPQIPQ 978

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                Q+DQQNL  + +K GTPLQ+ NSP                GDSEK    ISS  NA
Sbjct: 979  HSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNA 1038

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN GHQQ       A SL+IGTPGISASPLLAEFT  DG  GN  + +S K+S  EQPLE
Sbjct: 1039 GNIGHQQTTSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLE 1098

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIK V+S+S KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARN
Sbjct: 1099 RLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1158

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FI+ DGS   +K R   S MPL  +SSA S NDSF+  +  E S+LESTAT+ I+R R E
Sbjct: 1159 FITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRIE 1218

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEG---TIVKCSFNALAASSNLKS 566
             N+ALL+E+REINQRLIDT ++ISDED D  AA + GEG   T+VKCSF+A+A S NLKS
Sbjct: 1219 ANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKS 1278

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QYASAQ+ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+ RFSISLR L Q
Sbjct: 1279 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQ 1338

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSLGE+ +TWD CAR VI+EYAQQSGGGSFSS+YG WENC+ A
Sbjct: 1339 PMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1382



 Score =  176 bits (447), Expect = 1e-40
 Identities = 113/274 (41%), Positives = 153/274 (55%), Gaps = 13/274 (4%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDST + GQ    D QEE+YQKIK+MKE+YLPEL E+ QKI  + QQ ++LPQ PK +D
Sbjct: 588  SLDSTHQTGQANGVDWQEEVYQKIKTMKEMYLPELNEMYQKIAAKLQQHDSLPQQPK-SD 646

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQ-- 2297
             +EKLK FK  L+R+I+FLQ  KS+ILP +KEKL   EKQI+N+++ N   KP +S Q  
Sbjct: 647  QLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQ 706

Query: 2296 ----PGH------QQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2147
                P H      QQ Q S GQPH                                    
Sbjct: 707  GQLPPTHMHSMQQQQSQISQGQPH---------------DNQMNSQIQSMNLAGSMVTMQ 751

Query: 2146 XXXXXXXXSGSMPLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNT 1967
                      S+P  +  GV  +QQNM+NS+Q   N++S  G +L S+ Q   GSLQQN+
Sbjct: 752  PNNVTNVQHNSVP--SVSGVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSLQQNS 809

Query: 1966 INAPQKTNTGTL-SHSTLNQLQPSVNSLPLNSSI 1868
            ++APQ+ +   L S S +N LQ ++N+L  NS++
Sbjct: 810  VSAPQQASINNLPSQSGVNMLQSNINALQSNSNM 843



 Score =  162 bits (410), Expect = 2e-36
 Identities = 121/349 (34%), Positives = 168/349 (48%), Gaps = 10/349 (2%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDHAG----VASKFEERIYSVAANQRDYLR 4031
            DWRTQLQP+ R RI+ K+++TLKR  P S +D       +A +FEE+IY+ A++Q DYLR
Sbjct: 21   DWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDYLR 80

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGNQN-PSDLAIQGLHSQLCNPGQSLPM---GXXX 3863
            KIS+KM+++ESKS N   NS+ SN  G+ N P D     + +Q+ N GQSLP+       
Sbjct: 81   KISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG--SMQNQVHNQGQSLPIPLSANQS 138

Query: 3862 XXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQN 3683
                        N +          L +AL S++GL+Q+ + +VV Q  N+Q MSGISQN
Sbjct: 139  QVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQNMSGISQN 198

Query: 3682 SINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQH--HTMNQNLQQ 3509
            S  NS+GQ VPSN F+N+QR +                         Q+    +N+ LQQ
Sbjct: 199  SGGNSMGQGVPSNLFANSQRQIQGRQQVLPQQQQQHSQNSQQFLYHQQYPQQPLNKKLQQ 258

Query: 3508 GIMQPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQSS 3329
            G +   L+Q  + Q                                 + P+M+QSAP   
Sbjct: 259  GGLSHTLMQPQIQQQPQQQPNLLQPNQLQSSQQSGMQT-------SSVMPNMMQSAPLPG 311

Query: 3328 LIQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQTPI 3182
            L QNQ SSVQQ     +                    QT  +HQQQTP+
Sbjct: 312  LQQNQQSSVQQSTQPMM-----QQHPQSVLRPQQQQQQTVGIHQQQTPM 355


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  483 bits (1242), Expect = e-133
 Identities = 270/464 (58%), Positives = 314/464 (67%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN+LK+R G  +K  +F Q   +GQR     Q LK G+ F +               
Sbjct: 941  MNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPISSPQLLQTASPQIPQ 1000

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                Q+DQQNL  + +K GTPLQ+ NSP                GDSEK    ISS  NA
Sbjct: 1001 HSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNA 1060

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN GHQQ       A SL+IGTPGISASPLLAEFT  DG  GN  + +S K+S  EQPLE
Sbjct: 1061 GNIGHQQTTSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLE 1120

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIK V+S+S KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARN
Sbjct: 1121 RLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1180

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FI+ DGS   +K R   S MPL  +SSA S NDSF+  +  E S+LESTAT+ I+R R E
Sbjct: 1181 FITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRME 1240

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEG---TIVKCSFNALAASSNLKS 566
             N+ALL+E+REINQRLIDT ++ISDED D  AA + GEG   T+VKCSF+A+A S NLKS
Sbjct: 1241 ANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKS 1300

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QYASAQ+ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+ RFSISLR L Q
Sbjct: 1301 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQ 1360

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSLGE+ +TWD CAR VI+EYAQQSGGGSFSS+YG WENC+ A
Sbjct: 1361 PMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1404



 Score =  176 bits (447), Expect = 1e-40
 Identities = 114/274 (41%), Positives = 152/274 (55%), Gaps = 13/274 (4%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDST + GQ    D QEE+YQKIKSMKE+YLPEL E+ QKI  + QQ ++LPQ PK +D
Sbjct: 600  SLDSTHQTGQANGVDWQEEVYQKIKSMKEMYLPELNEMYQKIAAKLQQHDSLPQQPK-SD 658

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQ-- 2297
             +EKLK FK  L+R+ISFLQ  KS+ILP++KEKL   EKQI+N+++ N   KP +S Q  
Sbjct: 659  QLEKLKIFKTMLERIISFLQVSKSNILPSFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQ 718

Query: 2296 ----PGH------QQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2147
                P H      QQ Q S GQPH                                    
Sbjct: 719  GQLPPTHMHSMQQQQSQISQGQPH---------------DNQMNSQIQSMNLAGSMVTMQ 763

Query: 2146 XXXXXXXXSGSMPLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNT 1967
                      S+P  +  GV  +QQNM+NS+    N++S  G +L S+ Q   GSLQQN+
Sbjct: 764  PNNVTNVQHNSVP--SVSGVSTSQQNMLNSVLPGPNMDSGQGTSLSSMHQVNAGSLQQNS 821

Query: 1966 INAPQKTNTGTL-SHSTLNQLQPSVNSLPLNSSI 1868
            ++APQ+ +   L S S +N LQ ++N L  NS++
Sbjct: 822  VSAPQQASINNLASQSGVNMLQSNINPLQSNSNM 855



 Score =  160 bits (404), Expect = 1e-35
 Identities = 120/349 (34%), Positives = 168/349 (48%), Gaps = 10/349 (2%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDHAG----VASKFEERIYSVAANQRDYLR 4031
            DWRTQLQP+ R RI+ K+++TLKR  P S +D       +A +FEE+IY+ A++Q DYLR
Sbjct: 36   DWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDYLR 95

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGNQN-PSDLAIQGLHSQLCNPGQSLPM---GXXX 3863
            KIS+KM+++ESKS N   NS+ SN  G+ N P D     + +Q+ N GQSLP+       
Sbjct: 96   KISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG--SMQNQVHNQGQSLPIPLSANQS 153

Query: 3862 XXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQN 3683
                        N ++         L +AL S++GL+Q+ + +VV Q  N+Q MSGISQN
Sbjct: 154  QVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQNMSGISQN 213

Query: 3682 SINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQH--HTMNQNLQQ 3509
            S  NS+GQ VPSN F+N+QR +                         Q+    +N+ LQQ
Sbjct: 214  SGGNSMGQGVPSNLFANSQRQIQGRQQVLPQQQQQQSQNSQQFLYHPQYPQQLLNKKLQQ 273

Query: 3508 GIMQPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQSS 3329
            G +   L+Q  + Q                                 + P+M+QSA    
Sbjct: 274  GGLSHTLMQPQIQQQPQQQPNLLQPNQLQSSQQSGMQT-------SSVMPNMMQSASLPG 326

Query: 3328 LIQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQTPI 3182
            L QNQ SSVQQ     +                    QT  +HQQQTP+
Sbjct: 327  LQQNQQSSVQQSTQPMM-----QQHPQSVLRPQQQQQQTVGIHQQQTPM 370


>gb|KDO52330.1| hypothetical protein CISIN_1g000769mg [Citrus sinensis]
          Length = 1265

 Score =  482 bits (1240), Expect = e-132
 Identities = 270/464 (58%), Positives = 314/464 (67%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN+LK+R G  +K  +F Q   +GQR     Q LK G+ F +               
Sbjct: 801  MNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPISSPQLLQTASPQIPQ 860

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                Q+DQQNL  + +K GTPLQ+ NSP                GDSEK    ISS  NA
Sbjct: 861  HSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNA 920

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
            GN GHQQ       A SL+IGTPGISASPLLAEFT  DG  GN  + +S K+S  EQPLE
Sbjct: 921  GNIGHQQTSSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLE 980

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RLIK V+S+S KA              ID IAGSAPGNGSRAA GEDLVAMTKC LQARN
Sbjct: 981  RLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1040

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FI+ DGS   +K R   S MPL  +SSA S NDSF+  +  E S+LESTAT+ I+R R E
Sbjct: 1041 FITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRIE 1100

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEGEG---TIVKCSFNALAASSNLKS 566
             N+ALL+E+REINQRLIDT ++ISDED D  AA + GEG   T+VKCSF+A+A S NLKS
Sbjct: 1101 ANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKS 1160

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QYASAQ+ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+ RFSISLR L Q
Sbjct: 1161 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQ 1220

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSLGE+ +TWD CAR VI+EYAQQSGGGSFSS+YG WENC+ A
Sbjct: 1221 PMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1264



 Score =  176 bits (447), Expect = 1e-40
 Identities = 113/274 (41%), Positives = 153/274 (55%), Gaps = 13/274 (4%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDST + GQ    D QEE+YQKIK+MKE+YLPEL E+ QKI  + QQ ++LPQ PK +D
Sbjct: 470  SLDSTHQTGQANGVDWQEEVYQKIKTMKEMYLPELNEMYQKIAAKLQQHDSLPQQPK-SD 528

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQ-- 2297
             +EKLK FK  L+R+I+FLQ  KS+ILP +KEKL   EKQI+N+++ N   KP +S Q  
Sbjct: 529  QLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVNFISTNRPRKPVSSMQQQ 588

Query: 2296 ----PGH------QQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2147
                P H      QQ Q S GQPH                                    
Sbjct: 589  GQLPPTHMHSMQQQQSQISQGQPH---------------DNQMNSQIQSMNLAGSMVTMQ 633

Query: 2146 XXXXXXXXSGSMPLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNT 1967
                      S+P  +  GV  +QQNM+NS+Q   N++S  G +L S+ Q   GSLQQN+
Sbjct: 634  PNNVTNVQHNSVP--SVSGVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSLQQNS 691

Query: 1966 INAPQKTNTGTL-SHSTLNQLQPSVNSLPLNSSI 1868
            ++APQ+ +   L S S +N LQ ++N+L  NS++
Sbjct: 692  VSAPQQASINNLPSQSGVNMLQSNINALQSNSNM 725



 Score = 77.8 bits (190), Expect = 7e-11
 Identities = 64/204 (31%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
 Frame = -1

Query: 3787 LQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQNSINNSVGQLVPSNTFSNAQRHMXXX 3608
            L +AL S++GL+Q+ + +VV Q  N+Q MSGISQNS  NS+GQ VPSN F+N+QR +   
Sbjct: 47   LSSALPSVSGLSQSPIPSVVGQTVNMQNMSGISQNSGGNSMGQGVPSNLFANSQRQIQGR 106

Query: 3607 XXXXXXXXXXXXXXXXXXXXXXQH--HTMNQNLQQGIMQPPLLQSHMHQHXXXXXXXXXX 3434
                                  Q+    +N+ LQQG +   L+Q  + Q           
Sbjct: 107  QQVLPQQQQQQSQNSQQFLYHQQYPQQPLNKKLQQGGLSHTLMQPQIQQQPQQQPNLLQP 166

Query: 3433 XXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQSSLIQNQPSSVQQPRPSGLXXXXXXXX 3254
                                  + P+M+QSAP   L QNQ SSVQQ     +        
Sbjct: 167  NQLQSSQQSGMQT-------SSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMM-----QQH 214

Query: 3253 XXXXXXXXXXXXQTSVLHQQQTPI 3182
                        QT  +HQQQTP+
Sbjct: 215  PQSVLRPQQQQQQTVGIHQQQTPM 238


>ref|XP_009367255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like [Pyrus x bretschneideri]
          Length = 1361

 Score =  480 bits (1236), Expect = e-132
 Identities = 275/463 (59%), Positives = 320/463 (69%), Gaps = 4/463 (0%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN+LK+R G G+K  +F Q   AGQR    QQQLK GSPF +               
Sbjct: 904  MNDVNDLKMRQGMGVKPGVFQQHMPAGQRAYP-QQQLKPGSPFPMPSTNQLLQAASPQIS 962

Query: 1450 XXXXQ-IDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPN 1274
                  +DQQN+ T P K GTPLQTA SP                GDSEK S    S  N
Sbjct: 963  QHSSPQVDQQNILTHP-KAGTPLQTAGSPFVIPSPSTPMAPSPMPGDSEKPS----SLSN 1017

Query: 1273 AGNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPL 1094
            AGN GHQQA       QSL+IGTPGISASPLLAEF+  D    N  S +SGKSS  EQPL
Sbjct: 1018 AGNIGHQQAAGVGAPVQSLAIGTPGISASPLLAEFSVPDATHVNALSTISGKSSVTEQPL 1077

Query: 1093 ERLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQAR 914
            ERLIK V+S+S  A              ID IAGSAPGNGSRAA GEDLVAMTKC LQAR
Sbjct: 1078 ERLIKAVKSMSPNALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1137

Query: 913  NFISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFES--DLENSELESTATTRIRRYRA 740
            N ++ DGS  T+K R   S MPL+ +SSA S NDSF+   + E S+LESTAT+RI+R R 
Sbjct: 1138 NVMTQDGSNGTRKMRRYTSAMPLNVVSSAGSMNDSFKQLINSETSDLESTATSRIKRPRV 1197

Query: 739  EVNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEG-EGTIVKCSFNALAASSNLKSQ 563
            E N+ALL+E+REIN+RLIDT ++ISDEDVD  AAAAEG EGT+VKCSF+A+A S +LKSQ
Sbjct: 1198 EANHALLEEIREINRRLIDTVVDISDEDVDPSAAAAEGGEGTVVKCSFDAVALSPSLKSQ 1257

Query: 562  YASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQP 383
            YASAQ+ PI PLRL VP +YPNCSP+LLDK P E SKE+EDLSVKA+ RFSISLR + QP
Sbjct: 1258 YASAQMSPIQPLRLLVPTNYPNCSPVLLDKFPVEVSKEYEDLSVKAKSRFSISLRSISQP 1317

Query: 382  MSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            MSLGE+ +TWD CAR VI+E+AQQSGGGSFSS+YG WENC+ A
Sbjct: 1318 MSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1360



 Score =  175 bits (444), Expect = 3e-40
 Identities = 108/262 (41%), Positives = 142/262 (54%), Gaps = 1/262 (0%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDSTA+ G     D QEE+YQKIKSMKELY PEL+E+ QKI  + QQ ++LPQ PK ++
Sbjct: 585  SLDSTAQTGHATGGDWQEEVYQKIKSMKELYFPELSEMYQKIATKLQQHDSLPQQPK-SE 643

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
             +EKLK FK  L+R+IS LQFPKS+I P +KEKL   EKQI+N++  N   K     Q G
Sbjct: 644  QLEKLKMFKTMLERLISVLQFPKSNITPGFKEKLGTYEKQIVNFINTNRPRKQVPPLQQG 703

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
                   +  PH                                                
Sbjct: 704  ------QLPPPHMHSMQQPQSQITQVQSHEHQMNPQLQTMNLQGSVPTMQQNNMTSLQQN 757

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNTINAPQKTNTGTL 1931
             +S+  GV   QQNM+NSLQ S+NL+S  G+ L SL Q  +GS+QQ  ++APQ+ N   L
Sbjct: 758  SMSSISGVSTAQQNMMNSLQPSTNLDSGQGNALNSLQQVPVGSIQQTPVSAPQQANMNAL 817

Query: 1930 -SHSTLNQLQPSVNSLPLNSSI 1868
             S S ++ LQP++NSL  NS +
Sbjct: 818  SSQSGVSMLQPNINSLQSNSGM 839



 Score =  145 bits (367), Expect = 2e-31
 Identities = 108/311 (34%), Positives = 148/311 (47%), Gaps = 10/311 (3%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDHA----GVASKFEERIYSVAANQRDYLR 4031
            DWR+QLQ + R RI+ K+++TLKR  P S ++       +A +FEE+IY+ A +Q DYLR
Sbjct: 19   DWRSQLQADSRQRIVNKIMDTLKRHLPFSGQEGLLELKKIAVRFEEKIYTAATSQSDYLR 78

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGNQN-PSDLAIQGLHSQLCNPGQSLPM---GXXX 3863
            KIS+KM+ +E+KS N   NS+ SN  GN N P D A   +  Q+ N GQSL M       
Sbjct: 79   KISLKMLTMETKSQNSMANSLQSNSAGNSNRPPDPASFAMQPQVPNQGQSLSMPLPANQS 138

Query: 3862 XXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQN 3683
                        N +          L +AL   +GLTQT++ ++V QN N+Q MSG SQN
Sbjct: 139  QGRQQLLSQNIQNNVPPAGVQSSSGLSSALPPSSGLTQTSIPSIVGQNPNMQNMSGSSQN 198

Query: 3682 SINNSVGQLVPSNTFSNAQR--HMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQQ 3509
            S+ NS+GQ VPSN F+N+++                             QH  +    QQ
Sbjct: 199  SLGNSMGQGVPSNMFANSRQVPVRQQVVPQQQQLQQSQNSQQYVYPQQLQHSLLKPKYQQ 258

Query: 3508 GIMQPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQSS 3329
            G M P L+Q    Q                             T   +QPS+  S   SS
Sbjct: 259  GNM-PQLVQQQQQQQQQQQQQQQQQQNLLQPTQLQSSQQSVMPTSSVMQPSVQSSL--SS 315

Query: 3328 LIQNQPSSVQQ 3296
            L  NQ S++QQ
Sbjct: 316  LQHNQQSAMQQ 326


>ref|XP_007023331.1| Uncharacterized protein TCM_027312 [Theobroma cacao]
            gi|508778697|gb|EOY25953.1| Uncharacterized protein
            TCM_027312 [Theobroma cacao]
          Length = 1367

 Score =  479 bits (1234), Expect = e-132
 Identities = 268/464 (57%), Positives = 317/464 (68%), Gaps = 5/464 (1%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN++K+R G G+K  +F Q   AGQRQ+   QQLK GS F +               
Sbjct: 903  MNDVNDMKMRQGMGVKPGVFQQHLPAGQRQSYTHQQLKPGSQFPISSPQLLQAASPQMPQ 962

Query: 1450 XXXXQIDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPNA 1271
                Q+DQQ+L T+ SK GTPLQ+ANSP                G+SEK     SS  NA
Sbjct: 963  HSSPQVDQQSLLTSISKTGTPLQSANSPFVVPSPSTPLAPSPMLGESEKPVPGTSSLSNA 1022

Query: 1270 GNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPLE 1091
             N GHQQ       +QSL+IGTPGISASPLLAEFT  DG      + +S +S+  EQPLE
Sbjct: 1023 ANVGHQQGTGVQPGSQSLAIGTPGISASPLLAEFTGADGTHPTALTTVSSRSNITEQPLE 1082

Query: 1090 RLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQARN 911
            RL+K V+S+S  A               D IAGSAPGNGSRAA GEDLVAMTKC LQARN
Sbjct: 1083 RLMKAVKSMSPTALGASVSDIGSVVSMTDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1142

Query: 910  FISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFE--SDLENSELESTATTRIRRYRAE 737
            FI+ DG   TK+ R   S MPL+ +SSA S NDSF+  +  E S+LESTAT+ ++R R E
Sbjct: 1143 FITQDGMNGTKRMRRYTSAMPLNVVSSAGSVNDSFKQLTGSETSDLESTATSSVKRPRIE 1202

Query: 736  VNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAE---GEGTIVKCSFNALAASSNLKS 566
             N+ALL+E+REIN RLIDT ++ISDEDVD  AAAA    GEGTIVKCSF+A+A SSNLKS
Sbjct: 1203 ANHALLEEIREINLRLIDTVVDISDEDVDPSAAAATAEGGEGTIVKCSFSAVALSSNLKS 1262

Query: 565  QYASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQ 386
            QY SAQ+ PI PLRL VP +YPNCSPILLDK P E SKE+EDLSVKA+ RFSISLR L Q
Sbjct: 1263 QYMSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSVKAKSRFSISLRTLSQ 1322

Query: 385  PMSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            PMSLGE+ +TWD CAR VI+E+AQQSGGGSFSS+YG WENC+ A
Sbjct: 1323 PMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1366



 Score =  166 bits (420), Expect = 2e-37
 Identities = 105/262 (40%), Positives = 141/262 (53%), Gaps = 1/262 (0%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDSTA+ G     D QEE+YQKIK+MKE YLPEL E+ QKI  + QQ ++LPQ PK +D
Sbjct: 572  SLDSTAQTGHANGGDWQEEVYQKIKTMKETYLPELNEMYQKIAAKLQQHDSLPQQPK-SD 630

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
             +EKLK FK  L+R+I+FL   K++ILPT+K+KL   EKQIIN++  N   KPA++ Q G
Sbjct: 631  QLEKLKLFKTMLERIITFLSVSKANILPTFKDKLTSYEKQIINFINTNRPRKPASTLQQG 690

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
                   +  PH                                                
Sbjct: 691  ------QLPPPHMHSMQQPQPQINQTQSHDNQMNPQLQSINIQGSVPTMQTNNMTSLQHN 744

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNTINAPQKTNTGTL 1931
             LS+  GV   QQ M+NSLQ  SNL+S  G+ L S+ Q A G LQQN ++  Q+ N  +L
Sbjct: 745  SLSSLPGVSTAQQTMLNSLQPGSNLDSGQGNALGSMQQVAPGPLQQNPVSTSQQANISSL 804

Query: 1930 -SHSTLNQLQPSVNSLPLNSSI 1868
             S S ++ LQ ++N L  NS++
Sbjct: 805  SSQSGISVLQQNMNPLQSNSNM 826



 Score =  157 bits (396), Expect = 9e-35
 Identities = 117/346 (33%), Positives = 165/346 (47%), Gaps = 7/346 (2%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDHAG----VASKFEERIYSVAANQRDYLR 4031
            DWRTQLQ + R RI+ K+++TLKR  P S ++       +A +FEE+I++ A++Q DYLR
Sbjct: 21   DWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLNELRKIAVRFEEKIFTAASSQSDYLR 80

Query: 4030 KISMKMMALESKSLNGADNSIPSNYVGNQNPSDLAIQGLHSQLCNPGQSLPM---GXXXX 3860
            +IS+KM+ +E+KS     NSIP N   N  P D   Q + +Q+   GQS+P+        
Sbjct: 81   RISLKMLTMETKS----QNSIP-NTGNNGKPPDPGSQAMQNQVHGQGQSIPIPLQSNQSQ 135

Query: 3859 XXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQNS 3680
                       N +A         LQ+ +  ++GLTQ  + NVV QN+N+Q MSGI+QNS
Sbjct: 136  ARQQLLPQNVPNNMASAGVQSSAGLQSGMPPVSGLTQNPIPNVVGQNSNMQNMSGITQNS 195

Query: 3679 INNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQQGIM 3500
            +    GQ +PSN F+N QR M                         QH  M Q +Q G +
Sbjct: 196  L----GQGMPSNIFANQQRQM------QGRQQVHPQQQQQLYHHQLQHQLMRQKIQPGNL 245

Query: 3499 QPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQSSLIQ 3320
            QP L+QSHM Q                             T   +QP+++QS P   L Q
Sbjct: 246  QPSLMQSHMQQQ--------QQQNLLPPTQLQSSQQSGMQTSSVMQPTVMQSTPLPGLQQ 297

Query: 3319 NQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQTPI 3182
            NQ SS+QQ   S L                     ++ +HQQQTP+
Sbjct: 298  NQQSSLQQSTQSML---QQHQQSVLRQQQQPQQPASAGIHQQQTPM 340


>ref|XP_008384602.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
            transcription subunit 15a-like [Malus domestica]
          Length = 1392

 Score =  479 bits (1233), Expect = e-132
 Identities = 274/463 (59%), Positives = 320/463 (69%), Gaps = 4/463 (0%)
 Frame = -1

Query: 1630 MNEVNELKVRPGAGIKSELFPQPHHAGQRQTTYQQQLKTGSPFSVXXXXXXXXXXXXXXX 1451
            MN+VN+LK+R G G+K  +F Q   AGQR    QQQLK+GSPF +               
Sbjct: 935  MNDVNDLKMRQGMGVKPGVFQQHMPAGQRAYP-QQQLKSGSPFPIPSTNQLLQAASPQIS 993

Query: 1450 XXXXQ-IDQQNLHTAPSKVGTPLQTANSPLXXXXXXXXXXXXXXXGDSEKQSCFISSTPN 1274
                  +DQQN+ T P K GTPLQTA SP                GDSEK S  +    N
Sbjct: 994  QHSSPQVDQQNILTHP-KXGTPLQTAGSPFVIPSPSTPMAPSPMPGDSEKPSSLL----N 1048

Query: 1273 AGNAGHQQAVHGPTQAQSLSIGTPGISASPLLAEFTSLDGNQGNVPSNLSGKSSTMEQPL 1094
            AGN GHQQA       QSL+IGTPGISASPLLAEF+  D    N  S +SGKSS  EQPL
Sbjct: 1049 AGNIGHQQAAGVGAPVQSLAIGTPGISASPLLAEFSVPDATHVNALSTISGKSSVTEQPL 1108

Query: 1093 ERLIKVVRSISLKAFXXXXXXXXXXXXXIDTIAGSAPGNGSRAAAGEDLVAMTKCHLQAR 914
            ERLIK V+S+S  A              ID IAGSAPGNGSRAA GEDLVAMTKC LQAR
Sbjct: 1109 ERLIKAVKSMSPNALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1168

Query: 913  NFISHDGSCTTKKKRLRASVMPLHAMSSACSANDSFES--DLENSELESTATTRIRRYRA 740
            N ++ DGS  T+K R   S MPL+ +SSA S NDSF+   + E S+LESTAT+RI+R R 
Sbjct: 1169 NVMTQDGSNGTRKMRRYTSAMPLNVVSSAGSMNDSFKQLINSETSDLESTATSRIKRPRV 1228

Query: 739  EVNNALLQEVREINQRLIDTNIEISDEDVDSIAAAAEG-EGTIVKCSFNALAASSNLKSQ 563
            E N+ALL+E+REIN+RLIDT ++ISDEDVD  AAAAEG EGT+VKCSF+A+A S +LKSQ
Sbjct: 1229 EANHALLEEIREINRRLIDTVVDISDEDVDPSAAAAEGGEGTVVKCSFDAVALSPSLKSQ 1288

Query: 562  YASAQIFPILPLRLFVPADYPNCSPILLDKLPKEPSKEFEDLSVKARLRFSISLRGLLQP 383
            YASAQ+ PI PLRL VP +YPNCSP+LLDK P E SKE EDLSVKA+ RFSISLR + QP
Sbjct: 1289 YASAQMSPIQPLRLLVPTNYPNCSPVLLDKFPVEVSKECEDLSVKAKSRFSISLRSISQP 1348

Query: 382  MSLGEMTQTWDDCARMVIAEYAQQSGGGSFSSRYGAWENCVRA 254
            MSLGE+ +TWD CAR VI+E+AQQSGGGSFSS+YG WENC+ A
Sbjct: 1349 MSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1391



 Score =  167 bits (423), Expect = 7e-38
 Identities = 106/262 (40%), Positives = 137/262 (52%), Gaps = 1/262 (0%)
 Frame = -1

Query: 2650 SLDSTAKAGQPGATDLQEEIYQKIKSMKELYLPELTELRQKITIRCQQLEALPQHPKQTD 2471
            SLDSTA+ G     D QEE+YQKIKSMKE Y PEL+E+ QKI  + QQ ++LPQ PK  +
Sbjct: 610  SLDSTAQTGHATGGDWQEEVYQKIKSMKEXYFPELSEMYQKIATKLQQHDSLPQQPK-LE 668

Query: 2470 AIEKLKSFKISLDRMISFLQFPKSSILPTYKEKLPQLEKQIINYLAKNGCTKPAASQQPG 2291
             +EKLK FK  L+R+IS LQ PKSSI    KEKL   EKQI+N++  N   K     Q G
Sbjct: 669  QLEKLKMFKTMLERLISILQIPKSSITSGLKEKLGTYEKQIVNFINTNRPRKQVPPLQQG 728

Query: 2290 HQQLQHSVGQPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSM 2111
                   +  PH                                                
Sbjct: 729  ------QLPPPHMHSMQQPQSQITQVQSHENQMNPQLQTMNLQGSVPTMQQNNMTSLQQN 782

Query: 2110 PLSNYMGVPATQQNMINSLQTSSNLESTLGHTLRSLPQGALGSLQQNTINAPQKTNTGTL 1931
             +S+  GV   QQNM+NSLQ S+NL+S  G+ L SL Q  +GS+QQ  ++APQ+ N   L
Sbjct: 783  SMSSISGVSTAQQNMMNSLQPSTNLDSGQGNALNSLQQVPVGSIQQTPVSAPQQANMNAL 842

Query: 1930 -SHSTLNQLQPSVNSLPLNSSI 1868
             S S ++ LQP++NSL  NS +
Sbjct: 843  SSQSGVSMLQPNINSLQSNSGM 864



 Score =  137 bits (344), Expect = 1e-28
 Identities = 113/348 (32%), Positives = 157/348 (45%), Gaps = 9/348 (2%)
 Frame = -1

Query: 4198 DWRTQLQPNFRSRIIEKLLETLKRLFPASPEDHA----GVASKFEERIYSVAANQRDYLR 4031
            DWR+QLQ + R RI+ K+++TLKR  P S ++       +A +FEE+IY+ A +Q DYLR
Sbjct: 19   DWRSQLQADSRQRIVNKIMDTLKRHLPFSGQEGLLELKKIAVRFEEKIYTAATSQSDYLR 78

Query: 4030 KISMKMMALESKSLNGA-DNSIPSNYVGNQN-PSDLAIQGLHSQLCNPGQSLPM---GXX 3866
            KIS+KM+ +E+KS N    NS+ SN  GN N P D     +  Q+ N GQSL M      
Sbjct: 79   KISLKMLTMETKSQNSTMANSLQSNSAGNSNRPLDPGSFAMQPQVPNQGQSLSMPLPANQ 138

Query: 3865 XXXXXXXXXXXXXNAIAXXXXXXXXSLQTALSSMTGLTQTAMSNVVSQNANLQAMSGISQ 3686
                         N +          L +AL   +G TQT + ++V QN N+Q MSG SQ
Sbjct: 139  SQGRQQLLSQNIQNNVPPAGVQSSSGLSSALPPSSGSTQTPIPSIVGQNPNMQNMSGSSQ 198

Query: 3685 NSINNSVGQLVPSNTFSNAQRHMXXXXXXXXXXXXXXXXXXXXXXXXXQHHTMNQNLQQG 3506
            NS+ NS+GQ VPSN F+N+++                           Q +   Q LQ  
Sbjct: 199  NSLGNSMGQGVPSNMFANSRQ-------MPGRQQVVXQQQQPQQSQNSQQYMYPQQLQHS 251

Query: 3505 IMQPPLLQSHMHQHXXXXXXXXXXXXXXXXXXXXXXXXXXQATFKQIQPSMVQSAPQSSL 3326
            +++P   Q +M Q                                 +QPS+      SSL
Sbjct: 252  LLKPKYQQGNMPQLVQQQQQQNLLQPTQLQSSQQXVMPTSXVMQPSVQPSL------SSL 305

Query: 3325 IQNQPSSVQQPRPSGLXXXXXXXXXXXXXXXXXXXXQTSVLHQQQTPI 3182
             QNQ S +QQ     L                    Q + +HQQQTP+
Sbjct: 306  QQNQQSGMQQSSQPML------QQHSQPVLRQQQQPQQAAVHQQQTPM 347