BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00012293
         (217 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO73421.1| hypothetical protein CISIN_1g041434mg [Citrus sin...    59   1e-06
ref|XP_006474658.1| PREDICTED: DNA-directed RNA polymerase II su...    59   1e-06

>gb|KDO73421.1| hypothetical protein CISIN_1g041434mg [Citrus sinensis]
          Length = 369

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/74 (47%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
 Frame = +3

Query: 9   YHPHSFLSPPDDSPGLSYHPHPCLHPTSPTADSPGLSYHPT------ADSPGLSYHPHSF 170
           Y P S L  P  SPGLSY P   L P+   + SPGLSY P       + SPGLSY P S 
Sbjct: 103 YEPLSPLQAPSQSPGLSYEP---LSPSQAPSQSPGLSYEPVSPSQAPSQSPGLSYGPPSP 159

Query: 171 LSPTADSPCLSYHP 212
               + SP LSY P
Sbjct: 160 SQTPSQSPGLSYEP 173



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/76 (46%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   LSYHPHSFLSPPDDSPGLSYHPHPCLHPTSPTADSPGLSYHP------TADSPGLSYHPH 164
           LSY P S    P  SPGLSY P   + P+   + SPGLSY P       + SPGLSY P 
Sbjct: 118 LSYEPLSPSQAPSQSPGLSYEP---VSPSQAPSQSPGLSYGPPSPSQTPSQSPGLSYEPL 174

Query: 165 SFLSPTADSPCLSYHP 212
           S     + SP LSY P
Sbjct: 175 SPSQAPSQSPGLSYEP 190


>ref|XP_006474658.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Citrus
           sinensis]
          Length = 369

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/74 (47%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
 Frame = +3

Query: 9   YHPHSFLSPPDDSPGLSYHPHPCLHPTSPTADSPGLSYHPT------ADSPGLSYHPHSF 170
           Y P S L  P  SPGLSY P   L P+   + SPGLSY P       + SPGLSY P S 
Sbjct: 103 YEPLSPLQAPSQSPGLSYEP---LSPSQAPSQSPGLSYEPVSPSQAPSQSPGLSYGPPSP 159

Query: 171 LSPTADSPCLSYHP 212
               + SP LSY P
Sbjct: 160 SQAPSQSPGLSYEP 173



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/76 (46%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   LSYHPHSFLSPPDDSPGLSYHPHPCLHPTSPTADSPGLSYHP------TADSPGLSYHPH 164
           LSY P S    P  SPGLSY P   + P+   + SPGLSY P       + SPGLSY P 
Sbjct: 118 LSYEPLSPSQAPSQSPGLSYEP---VSPSQAPSQSPGLSYGPPSPSQAPSQSPGLSYEPL 174

Query: 165 SFLSPTADSPCLSYHP 212
           S     + SP LSY P
Sbjct: 175 SPSQAPSQSPGLSYEP 190



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/76 (46%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   LSYHPHSFLSPPDDSPGLSYHPHPCLHPTSPTADSPGLSYHP------TADSPGLSYHPH 164
           LSY P S    P  SPGLSY P   L P+   + SPGLSY P       + SP LSY P 
Sbjct: 152 LSYGPPSPSQAPSQSPGLSYEP---LSPSQAPSQSPGLSYEPPSPSQAPSQSPELSYEPS 208

Query: 165 SFLSPTADSPCLSYHP 212
           S     + SP LSY P
Sbjct: 209 SPSQAPSQSPGLSYEP 224