BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00011696
         (1753 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron sp...   654   0.0  
ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron sp...   654   0.0  
ref|XP_010270810.1| PREDICTED: chloroplastic group IIA intron sp...   642   0.0  
gb|ERN04039.1| hypothetical protein AMTR_s00079p00185530 [Ambore...   603   e-169
ref|XP_008797623.1| PREDICTED: chloroplastic group IIA intron sp...   602   e-169
ref|XP_010922087.1| PREDICTED: chloroplastic group IIA intron sp...   597   e-167
ref|XP_010108863.1| Chloroplastic group IIA intron splicing faci...   595   e-167
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   593   e-166
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp...   592   e-166
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp...   592   e-166
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp...   592   e-166
ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron sp...   588   e-165
ref|XP_010693304.1| PREDICTED: chloroplastic group IIA intron sp...   586   e-164
ref|XP_007033220.1| maize chloroplast splicing factor CRS1, puta...   586   e-164
ref|XP_007033219.1| maize chloroplast splicing factor CRS1, puta...   586   e-164
ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta...   586   e-164
ref|XP_007033217.1| maize chloroplast splicing factor CRS1, puta...   586   e-164
ref|XP_012491296.1| PREDICTED: chloroplastic group IIA intron sp...   585   e-164
gb|KHG25518.1| hypothetical protein F383_03195 [Gossypium arboreum]   584   e-164
ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron sp...   583   e-163

>ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
          Length = 789

 Score =  654 bits (1687), Expect = 0.0
 Identities = 343/539 (63%), Positives = 410/539 (76%), Gaps = 13/539 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V++I   W+  ELAMVKF +PLCRNM+RA EI+E KT GLV+WSKKDTLVVYRG NYQ  
Sbjct: 233  VDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQST 292

Query: 1572 SEVSTELHSGF-----AFNGKIIVGDVEDDITLSQ---HRTTA-----TNEGKEGLHPAG 1432
            S+   ++  G      A N K+   + EDD+T+S+   H +T        +G+E   P G
Sbjct: 293  SKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTG 352

Query: 1431 LVLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPF 1252
            + + +     Q VN +LYEREA+R+LDGLGPRFIDWWRPKPLP+DADLLPEV+  FRPPF
Sbjct: 353  IFMEEMVDS-QPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPF 411

Query: 1251 RLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVK 1072
            RL PP TRS+L DDELTYLRKLA  LPTHFVLGRN KLQGLAAAILKLWEKSLI KIA+K
Sbjct: 412  RLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIK 471

Query: 1071 WGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLL 892
            WGIPNTKN QM+ ELK LTGGVL+LRNKF+IILYRGKDFLP  VAN I ERE +     +
Sbjct: 472  WGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQI 531

Query: 891  DEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRL 712
             EE AR +A E+    D+ L   ST+GT SEFQ I T+   L+D N EI+V+LEAEK+RL
Sbjct: 532  REEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERL 591

Query: 711  EKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMG 532
            EKEL+KQER L IL+ K +RS K LAKLNSA  P D   D+EM+T EER+  RKIG KM 
Sbjct: 592  EKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMD 651

Query: 531  QTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEK 352
             +LLLGRRGVFD VI  +HQHWKHRE+V+V+TMQ++FSQV+ +A LLE ESGG+LV+++K
Sbjct: 652  SSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDK 711

Query: 351  LRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            L++GHAIIIYRGKNYRRP+KLVP+NLL KREAL RS EMQR G LK+F YQR + I DL
Sbjct: 712  LKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDL 770


>ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
            gi|731417745|ref|XP_010660412.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Vitis vinifera]
          Length = 828

 Score =  654 bits (1687), Expect = 0.0
 Identities = 343/539 (63%), Positives = 410/539 (76%), Gaps = 13/539 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V++I   W+  ELAMVKF +PLCRNM+RA EI+E KT GLV+WSKKDTLVVYRG NYQ  
Sbjct: 233  VDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQST 292

Query: 1572 SEVSTELHSGF-----AFNGKIIVGDVEDDITLSQ---HRTTA-----TNEGKEGLHPAG 1432
            S+   ++  G      A N K+   + EDD+T+S+   H +T        +G+E   P G
Sbjct: 293  SKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTG 352

Query: 1431 LVLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPF 1252
            + + +     Q VN +LYEREA+R+LDGLGPRFIDWWRPKPLP+DADLLPEV+  FRPPF
Sbjct: 353  IFMEEMVDS-QPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPF 411

Query: 1251 RLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVK 1072
            RL PP TRS+L DDELTYLRKLA  LPTHFVLGRN KLQGLAAAILKLWEKSLI KIA+K
Sbjct: 412  RLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIK 471

Query: 1071 WGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLL 892
            WGIPNTKN QM+ ELK LTGGVL+LRNKF+IILYRGKDFLP  VAN I ERE +     +
Sbjct: 472  WGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQI 531

Query: 891  DEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRL 712
             EE AR +A E+    D+ L   ST+GT SEFQ I T+   L+D N EI+V+LEAEK+RL
Sbjct: 532  REEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERL 591

Query: 711  EKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMG 532
            EKEL+KQER L IL+ K +RS K LAKLNSA  P D   D+EM+T EER+  RKIG KM 
Sbjct: 592  EKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMD 651

Query: 531  QTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEK 352
             +LLLGRRGVFD VI  +HQHWKHRE+V+V+TMQ++FSQV+ +A LLE ESGG+LV+++K
Sbjct: 652  SSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDK 711

Query: 351  LRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            L++GHAIIIYRGKNYRRP+KLVP+NLL KREAL RS EMQR G LK+F YQR + I DL
Sbjct: 712  LKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDL 770


>ref|XP_010270810.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
            gi|720047420|ref|XP_010270811.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Nelumbo nucifera]
          Length = 801

 Score =  642 bits (1657), Expect = 0.0
 Identities = 334/526 (63%), Positives = 394/526 (74%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EI+  WR  ELAM+ F +PLCRNM+RA EIVE KTGGLVVWSKKDT VVYRG NY   
Sbjct: 277  VDEIKMIWRNNELAMINFDIPLCRNMDRAREIVEIKTGGLVVWSKKDTHVVYRGSNYLSS 336

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQSV 1393
            SE S E HSG  +                          ++G     + + +N G+ +S+
Sbjct: 337  SEASQESHSGVEY-------------------------AEQGWPFKSISVEENMGL-KSI 370

Query: 1392 NVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQLKD 1213
            N TLYEREA+R+LDGLGPRFIDWWR KPLP+DADLLPEVV +FRPPFRLCPP  RS+L D
Sbjct: 371  NRTLYEREADRLLDGLGPRFIDWWRQKPLPVDADLLPEVVPDFRPPFRLCPPNVRSKLTD 430

Query: 1212 DELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQMSW 1033
            DELTYLR LA  LPTHF LGRN KLQGLAAAILKLWEK++I KIAVKWGIPNT N QM+W
Sbjct: 431  DELTYLRSLARHLPTHFALGRNKKLQGLAAAILKLWEKNIIVKIAVKWGIPNTDNEQMAW 490

Query: 1032 ELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFESF 853
            ELK LTGGVLILRNKF IILYRGKDFLP  VAN I ERE +++   L EE AR +A ESF
Sbjct: 491  ELKHLTGGVLILRNKFLIILYRGKDFLPCGVANLIVEREMELSRFQLQEEGARFKAIESF 550

Query: 852  HAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKLLI 673
            H +DE+L   S  GTFSEFQ I  K     +K+ +I ++  AEK++LEKELRKQER L I
Sbjct: 551  HILDETLTSTSAIGTFSEFQDIQKKCIWNDNKSRDIDIKTAAEKEKLEKELRKQERMLFI 610

Query: 672  LQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVFDS 493
            L++K K+S K LAKLN A    +   D+E++T EER+  RKIGLKM + L+LGRRGVFD 
Sbjct: 611  LKMKIKKSAKELAKLNLAWKHSEHVADREIITEEERECFRKIGLKMDKFLVLGRRGVFDG 670

Query: 492  VIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYRGK 313
            VI  +HQHWKHRE+V+V+TMQ++F QVM++A LLEIESGGILV+VEKL+KGHAII+YRGK
Sbjct: 671  VIEGLHQHWKHREIVKVITMQRSFIQVMDTAKLLEIESGGILVSVEKLKKGHAIILYRGK 730

Query: 312  NYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            NYRRPLKLVP+N L KREAL RS EMQR G LK+F YQR + I +L
Sbjct: 731  NYRRPLKLVPDNFLTKREALQRSLEMQRIGSLKFFAYQRQQMILNL 776


>gb|ERN04039.1| hypothetical protein AMTR_s00079p00185530 [Amborella trichopoda]
          Length = 886

 Score =  603 bits (1556), Expect = e-169
 Identities = 317/528 (60%), Positives = 384/528 (72%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            + EI   W++ ELAM+KF +PLCRNM+RA EIVETKTGGLVVW KK TLVVYRG NY   
Sbjct: 363  MNEIYAVWKKRELAMLKFDVPLCRNMDRATEIVETKTGGLVVWRKKGTLVVYRGTNYHSL 422

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQSV 1393
            S+ S                ++ DD  +S        +    ++ AG     ++G+++  
Sbjct: 423  SKTSETNPWSL---------ELFDDNKISAPNGFLNFKDDTMIYQAG-----SDGLMKE- 467

Query: 1392 NVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQLKD 1213
              TL+EREANR+LD LGPRFIDWW   PLP+DADLLPEV+ NFRPP RLCPP  +S+L D
Sbjct: 468  --TLFEREANRLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTD 525

Query: 1212 DELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQMSW 1033
            +ELTYLRK A  LPTHF LG+NTKLQGLAAAILKLWEKSLIAKIA+KWGIPN  + QM++
Sbjct: 526  EELTYLRKFAKHLPTHFALGKNTKLQGLAAAILKLWEKSLIAKIAIKWGIPNVNHQQMAY 585

Query: 1032 ELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFESF 853
            ELK LTGGVL+L+NKF+I+LYRGKDFLPP VANSIAERET + T  + EE ARS A   F
Sbjct: 586  ELKHLTGGVLLLQNKFFILLYRGKDFLPPGVANSIAERETTLKTLQIHEENARSIAATGF 645

Query: 852  HAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKLLI 673
             + DE+ P  S +GT S+FQ I   S    +   E  ++LEA K++LE ELRKQE  L I
Sbjct: 646  LSPDETQPTTSRTGTLSDFQEIQEHSHPFNESQTESNIKLEAAKEKLEIELRKQEHMLSI 705

Query: 672  LQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVFDS 493
            L+LK +RSEK +AKLNSA  P     DQE +T EE Q  RK+GLKM + LLLGRRGVFD 
Sbjct: 706  LKLKVERSEKEMAKLNSAWQPAKGEADQETITKEEFQNFRKVGLKMDEVLLLGRRGVFDG 765

Query: 492  VIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYRGK 313
            VIGSIHQHWKHREVV++++MQK   +V  +A +LE ESGGIL+AV KLRKGHAII+YRGK
Sbjct: 766  VIGSIHQHWKHREVVKLVSMQKTLEEVTRTARMLETESGGILIAVVKLRKGHAIILYRGK 825

Query: 312  NYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDLNQ 169
            NYRRP KL+P+NLL K+EA  RS E+QRRG LKYF  Q+ ++IW L Q
Sbjct: 826  NYRRPPKLLPDNLLSKKEAFDRSIEIQRRGSLKYFICQQEQSIWKLQQ 873


>ref|XP_008797623.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Phoenix dactylifera]
          Length = 810

 Score =  602 bits (1551), Expect = e-169
 Identities = 326/542 (60%), Positives = 395/542 (72%), Gaps = 14/542 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EIR+ W +GELAMVKF  PL RNM+RA EI+ETKTGGLVVW ++DTLVV+RG NY L 
Sbjct: 244  VDEIRRTWSKGELAMVKFVEPLRRNMDRAHEILETKTGGLVVWHRRDTLVVHRGSNYSLV 303

Query: 1572 SEVS-------------TELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGK-EGLHPA 1435
             E S             ++L+ G + +G  I     D+IT   + +    +G  E  H +
Sbjct: 304  PEASHNSAITIGGEASSSKLNLGISEDGGAIPPTKCDEIT---NISVIQQDGDIENTHTS 360

Query: 1434 GLVLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPP 1255
             +     N   +++  TLYERE +R+LDGLGPRFIDWW  KPLP+DADLLPE V NFRPP
Sbjct: 361  NMEWEIQNAA-EAIKGTLYEREVDRLLDGLGPRFIDWWWRKPLPVDADLLPEFVPNFRPP 419

Query: 1254 FRLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAV 1075
            FRLCPP  +++L D+ELTYLRKLA PLPTHF LG+  KLQGLAAAI+KLWEKSLIAKIAV
Sbjct: 420  FRLCPPLMKAKLTDEELTYLRKLAHPLPTHFALGKIRKLQGLAAAIIKLWEKSLIAKIAV 479

Query: 1074 KWGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKL 895
            K GIPN  N QMS ELKRLTGGVLILRNK +IILYRGKDFL   VA+SIAERET+I  + 
Sbjct: 480  KVGIPNINNKQMSCELKRLTGGVLILRNKDFIILYRGKDFLSARVASSIAERETEICGQQ 539

Query: 894  LDEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQR 715
            L EE AR+ A   F  IDE L    T GT++EFQ I +K   +     E K+Q EAE+ +
Sbjct: 540  LKEELARTNAINLFSDIDEFLYSTGTVGTYTEFQDIQSKYTAVNSGISEEKIQFEAERAK 599

Query: 714  LEKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKM 535
            LEKE+RK+ER+L I++ K ++SEK LAKLNS  SP +   DQE+L  EERQT R IGLKM
Sbjct: 600  LEKEIRKKERELFIIKRKIEKSEKELAKLNSQWSPSEEAADQELLMEEERQTFRNIGLKM 659

Query: 534  GQTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVE 355
             + LLLGRRG++D VIG+IHQHWKH+EVV+V+T Q+ F Q+  +A LLEIESGGILVA+E
Sbjct: 660  DELLLLGRRGIYDGVIGNIHQHWKHKEVVKVITKQQDFHQITYTAQLLEIESGGILVAIE 719

Query: 354  KLRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            KLR  HAII+YRGKNY RPLKL+P+NLL KREA  RS E+QRRG LKYF  QR ++I  L
Sbjct: 720  KLRSTHAIILYRGKNYGRPLKLLPDNLLTKREAFQRSIEIQRRGSLKYFARQRQKSICAL 779

Query: 174  NQ 169
             Q
Sbjct: 780  KQ 781


>ref|XP_010922087.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Elaeis guineensis]
            gi|743757464|ref|XP_010922095.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Elaeis guineensis]
            gi|743757467|ref|XP_010922108.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Elaeis guineensis]
          Length = 796

 Score =  597 bits (1539), Expect = e-167
 Identities = 325/542 (59%), Positives = 399/542 (73%), Gaps = 14/542 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EIR+ WR+GELAMVKF  PL RNM+RA EI+ETKTGGLVVW K+ TLVVYRG NY L 
Sbjct: 240  VDEIRRTWRKGELAMVKFVEPLRRNMDRAHEILETKTGGLVVWRKRYTLVVYRGSNYSLI 299

Query: 1572 SEVS-------------TELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGK-EGLHPA 1435
             E S             ++L+ G + +G  I+    D+IT   + +    +G  E  H +
Sbjct: 300  PEASHNSAITIGGKASSSKLNLGISEDGGAILPTKSDEIT---NISVIQQDGDVENSHTS 356

Query: 1434 GLVLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPP 1255
             +     N   +++  TLYERE +R+LDGLGPRFIDWW  KPLP+DADLLPE V NFRPP
Sbjct: 357  SMAWEIRNAA-EAIEGTLYEREVDRLLDGLGPRFIDWWWRKPLPVDADLLPEFVPNFRPP 415

Query: 1254 FRLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAV 1075
             RLCPP  + +L D+ELTYLRKLA PLPTHF LG++ KLQGLAAAI+KLWEKSLIAKIAV
Sbjct: 416  IRLCPPSMKPKLMDEELTYLRKLARPLPTHFALGKSRKLQGLAAAIIKLWEKSLIAKIAV 475

Query: 1074 KWGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKL 895
            K GIPN  N QMS ELKRLTGGVLILRNK +IILYRGKDFL   VA+SIA+RET+I  + 
Sbjct: 476  KVGIPNINNQQMSCELKRLTGGVLILRNKDFIILYRGKDFLSGRVASSIADRETEICGQQ 535

Query: 894  LDEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQR 715
            L EE AR+ A +   +  + L   ST GT++EFQ I +K   +     E K+Q EAE+ +
Sbjct: 536  LKEEVARTNAIKL--SSGKFLYSTSTVGTYTEFQDIQSKYTAVNSGIPEEKIQFEAERAK 593

Query: 714  LEKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKM 535
            LEKE+ KQE +L IL+ K ++SEK LAKLNS+ SP D+  DQE+LT EER+T R IGLKM
Sbjct: 594  LEKEIGKQEHELFILKQKIEKSEKELAKLNSSWSPLDQAADQELLTEEERRTFRNIGLKM 653

Query: 534  GQTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVE 355
             ++LLLGRRG++D VIG+IHQHWKH+EVV+V+T Q+ F Q+  +A LLEIESGGILVA+E
Sbjct: 654  DESLLLGRRGIYDGVIGNIHQHWKHKEVVKVITKQQDFQQITYTAQLLEIESGGILVAIE 713

Query: 354  KLRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            KLR  HAII+YRGKNY RPLKL+P+NLL KREAL RS E+QRRG LKYF +QR ++I  L
Sbjct: 714  KLRSTHAIILYRGKNYCRPLKLLPDNLLTKREALQRSTEIQRRGSLKYFAHQRQKSICTL 773

Query: 174  NQ 169
             Q
Sbjct: 774  KQ 775


>ref|XP_010108863.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis] gi|587933540|gb|EXC20503.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 828

 Score =  595 bits (1533), Expect = e-167
 Identities = 323/543 (59%), Positives = 385/543 (70%), Gaps = 17/543 (3%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            VE+++  W+  ELAMVKF +PLCRNM+RA EI+E KTGGLVVW +KD  V+YRGCNYQ  
Sbjct: 223  VEDVKFVWKSNELAMVKFDVPLCRNMDRAQEILEMKTGGLVVWRRKDAQVIYRGCNYQPT 282

Query: 1572 SEVSTELHSGFA------FNGKI--------IVGDVEDDITLSQHRTTATNEGKEGLHPA 1435
            S+     ++GF+      F+  +         V +V+      + + +  N   E + P 
Sbjct: 283  SKTFPRTYAGFSGHQETPFSNLVQLDSRKGNSVSEVKSYENTIERKISKKNTEGETI-PT 341

Query: 1434 GLVLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPP 1255
             ++L KN+   Q  + +LY REA+R+LDGLGPRFIDWW  KPLP+DADLLPEVV  FRPP
Sbjct: 342  AIIL-KNDANFQPSS-SLYVREADRLLDGLGPRFIDWWMNKPLPVDADLLPEVVPGFRPP 399

Query: 1254 FRLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAV 1075
            FR CPP TRS+L D+ELTYLRKLA  LPTHFVLGRN KLQGLAAAILKLWEK  IAKIAV
Sbjct: 400  FRRCPPHTRSKLTDEELTYLRKLAHSLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIAV 459

Query: 1074 KWGIPNTKNAQMSWELKR---LTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKIN 904
            K G+PNT N QM++ELK    LTGG L+LRNKF IILYRGKDFLP  +A  I +RET++ 
Sbjct: 460  KLGVPNTNNEQMAYELKARICLTGGDLLLRNKFIIILYRGKDFLPDQIAELITKRETELE 519

Query: 903  TKLLDEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAE 724
               L EE AR    E     DE L   S +GT SEF  I  + G     N E+K+  EAE
Sbjct: 520  YCQLYEEHARLVVAEKVFVADEPLKKTSPAGTLSEFHDIQIEYGDSNKGNIEVKLPFEAE 579

Query: 723  KQRLEKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIG 544
            K+RLE ELRKQERKLLIL  K K+S K L KLN+A  P +R  DQEMLT EER+  RKIG
Sbjct: 580  KERLESELRKQERKLLILNSKIKKSTKELLKLNTAWKPSERDGDQEMLTEEERECFRKIG 639

Query: 543  LKMGQTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILV 364
            LKM   L+LGRRG+FD VI  + QHWKHREV +V+TMQ+ F QVM +AT LE ESGG+LV
Sbjct: 640  LKMRSVLVLGRRGIFDGVIEGLRQHWKHREVAKVITMQRYFWQVMYTATSLEAESGGLLV 699

Query: 363  AVEKLRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTI 184
            +VEKL++GHAIIIYRGKNYRRPLKL+  NLL KR+AL RS EMQR G LK+F YQRHR I
Sbjct: 700  SVEKLKEGHAIIIYRGKNYRRPLKLISVNLLTKRKALSRSLEMQRIGSLKFFAYQRHRAI 759

Query: 183  WDL 175
             DL
Sbjct: 760  SDL 762


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score =  593 bits (1528), Expect = e-166
 Identities = 323/541 (59%), Positives = 386/541 (71%), Gaps = 15/541 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRG------ 1591
            V EIR AWR  ELAMVKF +PLCRNM+RA EI+E KTGGLV+W+KKD  VVYRG      
Sbjct: 212  VFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGDSSKSS 271

Query: 1590 ---C-----NYQLPSEVSTELHSGFAFNGKIIVGDVEDDI-TLSQHRTTATNEGKEGLHP 1438
               C     + + P   ST LH       K+ V  ++ +  TL Q+R+    +G+E   P
Sbjct: 272  VKMCPRSADDQEAPLSKSTHLH----LEKKVNVSWIKSNTATLDQNRSL--KDGEENSLP 325

Query: 1437 AGLVLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRP 1258
              + + KN  I +S    LYERE +R+LDGLGPRF+DWW  KPLP+D DLLPEVV  F+P
Sbjct: 326  TSIFMDKNLRIDKS----LYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKP 381

Query: 1257 PFRLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIA 1078
            PFRL PP  RS+L DDELTYLRKLA PLPTHFVLGRN  LQGLA AILKLWEKSL+AKI 
Sbjct: 382  PFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKIT 441

Query: 1077 VKWGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTK 898
            VKWGIPNT N QM+ ELK LTGGVL+LRNKF IILYRG DFLP  V N I ERE ++   
Sbjct: 442  VKWGIPNTDNEQMANELKHLTGGVLLLRNKFLIILYRGNDFLPCGVENLIVERERELQIC 501

Query: 897  LLDEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQ 718
               EE AR +A E+FH   E L   S +GT SEFQ I +  G L+  N E ++QLEAE +
Sbjct: 502  QNHEEGARLKAIETFHLPHEPLEKTSKAGTLSEFQNIQSDFGDLKMGNREFELQLEAEIE 561

Query: 717  RLEKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLK 538
             LE+ELRKQERKL IL +K ++S K L++LNSA  P ++  D EM+T EERQ L KIG+K
Sbjct: 562  DLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQDPDLEMITEEERQCLHKIGMK 621

Query: 537  MGQTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAV 358
            M   LLLGRRGVFD VI  +HQHWK+REV RV+T QK F+QV+ +A  L  ESGGIL++V
Sbjct: 622  MNSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQVIYTAKSLVAESGGILISV 681

Query: 357  EKLRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWD 178
            +KL++GHAIIIYRGKNYRRPLKL+ +NLL KR+AL RS EMQR G LK+F YQR R I +
Sbjct: 682  DKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQRLGSLKFFAYQRQRVISN 741

Query: 177  L 175
            L
Sbjct: 742  L 742


>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Glycine max]
          Length = 744

 Score =  592 bits (1525), Expect = e-166
 Identities = 304/526 (57%), Positives = 389/526 (73%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V++I++ WR  ELAM+KF +PLCRNM+RA EIVETKTGGLVV SKKD LVVYRGCN+QL 
Sbjct: 202  VDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLT 261

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQSV 1393
            ++ S  L +      ++ +    D   +  + +++        H   +  G  +   Q V
Sbjct: 262  TKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLV 321

Query: 1392 NVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQLKD 1213
            N +LYERE  R+LDGLGPRFIDWW  KPLP+DADLLPE V  F+PPFRLCPP + ++L D
Sbjct: 322  NGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTD 381

Query: 1212 DELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQMSW 1033
             ELTY RKLA  LPTHFVLGRN  L+GLA+AILKLWEKSLIAKIA+K+GIPNT N  M+ 
Sbjct: 382  YELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMAN 441

Query: 1032 ELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFESF 853
            ELK LTGGVL+LRNKFYI+LYRG DFLP SVA+ + +RE ++ ++ L EE AR +A ++F
Sbjct: 442  ELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARMKAIQAF 501

Query: 852  HAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKLLI 673
              IDE     STSGT +EF+ I TK    +  N +  +QLEAE  RLEKEL++++R+  I
Sbjct: 502  SPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLEKELKEEQRRAFI 561

Query: 672  LQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVFDS 493
            L  K KRSE+ L+KLN+A +P ++  D E++T EER+  RKIGLKM  +LLLGRRG+FD 
Sbjct: 562  LNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDG 621

Query: 492  VIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYRGK 313
            V+  +HQHWKHREVV+V+TMQK FSQV+N+A +LE ESGGILV+V+KL++GHAIIIYRGK
Sbjct: 622  VLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAIIIYRGK 681

Query: 312  NYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            NY+RP   + +NLL KREAL RS EMQR G +K+F +QR + I +L
Sbjct: 682  NYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISEL 727


>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Glycine max]
            gi|571550194|ref|XP_006603056.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Glycine max]
            gi|571550197|ref|XP_006603057.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Glycine max]
          Length = 747

 Score =  592 bits (1525), Expect = e-166
 Identities = 304/526 (57%), Positives = 389/526 (73%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V++I++ WR  ELAM+KF +PLCRNM+RA EIVETKTGGLVV SKKD LVVYRGCN+QL 
Sbjct: 202  VDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLT 261

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQSV 1393
            ++ S  L +      ++ +    D   +  + +++        H   +  G  +   Q V
Sbjct: 262  TKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLV 321

Query: 1392 NVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQLKD 1213
            N +LYERE  R+LDGLGPRFIDWW  KPLP+DADLLPE V  F+PPFRLCPP + ++L D
Sbjct: 322  NGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTD 381

Query: 1212 DELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQMSW 1033
             ELTY RKLA  LPTHFVLGRN  L+GLA+AILKLWEKSLIAKIA+K+GIPNT N  M+ 
Sbjct: 382  YELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMAN 441

Query: 1032 ELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFESF 853
            ELK LTGGVL+LRNKFYI+LYRG DFLP SVA+ + +RE ++ ++ L EE AR +A ++F
Sbjct: 442  ELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARMKAIQAF 501

Query: 852  HAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKLLI 673
              IDE     STSGT +EF+ I TK    +  N +  +QLEAE  RLEKEL++++R+  I
Sbjct: 502  SPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLEKELKEEQRRAFI 561

Query: 672  LQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVFDS 493
            L  K KRSE+ L+KLN+A +P ++  D E++T EER+  RKIGLKM  +LLLGRRG+FD 
Sbjct: 562  LNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDG 621

Query: 492  VIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYRGK 313
            V+  +HQHWKHREVV+V+TMQK FSQV+N+A +LE ESGGILV+V+KL++GHAIIIYRGK
Sbjct: 622  VLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAIIIYRGK 681

Query: 312  NYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            NY+RP   + +NLL KREAL RS EMQR G +K+F +QR + I +L
Sbjct: 682  NYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISEL 727


>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 750

 Score =  592 bits (1525), Expect = e-166
 Identities = 304/526 (57%), Positives = 389/526 (73%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V++I++ WR  ELAM+KF +PLCRNM+RA EIVETKTGGLVV SKKD LVVYRGCN+QL 
Sbjct: 202  VDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLT 261

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQSV 1393
            ++ S  L +      ++ +    D   +  + +++        H   +  G  +   Q V
Sbjct: 262  TKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLV 321

Query: 1392 NVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQLKD 1213
            N +LYERE  R+LDGLGPRFIDWW  KPLP+DADLLPE V  F+PPFRLCPP + ++L D
Sbjct: 322  NGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTD 381

Query: 1212 DELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQMSW 1033
             ELTY RKLA  LPTHFVLGRN  L+GLA+AILKLWEKSLIAKIA+K+GIPNT N  M+ 
Sbjct: 382  YELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMAN 441

Query: 1032 ELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFESF 853
            ELK LTGGVL+LRNKFYI+LYRG DFLP SVA+ + +RE ++ ++ L EE AR +A ++F
Sbjct: 442  ELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARMKAIQAF 501

Query: 852  HAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKLLI 673
              IDE     STSGT +EF+ I TK    +  N +  +QLEAE  RLEKEL++++R+  I
Sbjct: 502  SPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLEKELKEEQRRAFI 561

Query: 672  LQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVFDS 493
            L  K KRSE+ L+KLN+A +P ++  D E++T EER+  RKIGLKM  +LLLGRRG+FD 
Sbjct: 562  LNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDG 621

Query: 492  VIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYRGK 313
            V+  +HQHWKHREVV+V+TMQK FSQV+N+A +LE ESGGILV+V+KL++GHAIIIYRGK
Sbjct: 622  VLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAIIIYRGK 681

Query: 312  NYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            NY+RP   + +NLL KREAL RS EMQR G +K+F +QR + I +L
Sbjct: 682  NYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISEL 727


>ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Musa acuminata subsp.
            malaccensis]
          Length = 768

 Score =  588 bits (1516), Expect = e-165
 Identities = 314/528 (59%), Positives = 384/528 (72%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            +EEIR+ W+E EL MV+   PL RNM+RA EIVETKTGGLVVW K+D LVVYRG  Y++ 
Sbjct: 246  MEEIRRGWKENELVMVRIVEPLRRNMDRAREIVETKTGGLVVWCKRDFLVVYRGQKYEMF 305

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQSV 1393
                +   S  A N K+  G  E+D  +    +    +G+  +  +G+ +G       S+
Sbjct: 306  RNAPS---SPNAVN-KVNPGIFEEDSAIVSG-SVVKMDGEVQIMESGIQMGDI-----SI 355

Query: 1392 NVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQLKD 1213
              +LYEREA+R+LDGLGPRF+DWW  KPLP+DADLLPEVV  FRPP R+CPP  R +L D
Sbjct: 356  EGSLYEREADRLLDGLGPRFVDWWWQKPLPVDADLLPEVVPGFRPPLRMCPPGVRPKLTD 415

Query: 1212 DELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQMSW 1033
            DEL YLRKLA PLPTHF LGRN KLQGLAA+I KLWEKSLIAKIAVK GI NT N QMS 
Sbjct: 416  DELMYLRKLARPLPTHFALGRNRKLQGLAASIRKLWEKSLIAKIAVKVGIQNTNNEQMSL 475

Query: 1032 ELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFESF 853
            ELKRLTGGVLILRNKF+IILYRGKDFLP  V N I ERE ++N + L+EE AR+    S 
Sbjct: 476  ELKRLTGGVLILRNKFFIILYRGKDFLPGGVTNLIDEREAELNEQQLEEEKARTGFTNSL 535

Query: 852  HAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKLLI 673
             A+D  LP  S  GT+ EFQ I      L + ++  ++++EAE+++L+KELR+ E KL I
Sbjct: 536  RAMDNILPSFSIVGTYMEFQEIQANHISLNNLSYRGQIRIEAEREKLKKELREHEHKLFI 595

Query: 672  LQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVFDS 493
            L+ K +RSE+ L+KL+ +C P ++T D E+LT EERQ  RK+GL+M + +LLGRRG++D 
Sbjct: 596  LKQKIERSEELLSKLSLSCCPSEQTADLEILTEEERQAFRKVGLEMNEIILLGRRGIYDG 655

Query: 492  VIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYRGK 313
            V GSIHQHWKHREVV+VLT QKAF  +  +A LLE+ESGGILVAVEKLR  HAIIIYRGK
Sbjct: 656  VFGSIHQHWKHREVVKVLTKQKAFHHITCTARLLEVESGGILVAVEKLRTSHAIIIYRGK 715

Query: 312  NYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDLNQ 169
            NY RPLK    NLL KREAL RS E+QRRG LKYF  QR + IW+L Q
Sbjct: 716  NYARPLK-PSNNLLSKREALQRSIEIQRRGSLKYFARQREKLIWELTQ 762


>ref|XP_010693304.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Beta vulgaris subsp. vulgaris]
            gi|870867703|gb|KMT18572.1| hypothetical protein
            BVRB_2g027050 [Beta vulgaris subsp. vulgaris]
          Length = 808

 Score =  586 bits (1511), Expect = e-164
 Identities = 311/526 (59%), Positives = 380/526 (72%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+E+   W   EL M+KF LPLCRNM+RA EIVE KTGGLVVWSKKD+LV YRG +Y+L 
Sbjct: 267  VDEVHSIWANNELVMLKFDLPLCRNMDRAREIVEFKTGGLVVWSKKDSLVAYRGSDYRL- 325

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQSV 1393
               S + + G       + G           R     E      P GL++ KN G  +  
Sbjct: 326  RRCSRKTYVG------PVAGGQRYSSKQGYERRNMVQENDS--RPFGLLMDKNLGT-KPT 376

Query: 1392 NVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQLKD 1213
            +  LYERE +R+LDGLGPRFIDWW PKPLP+D DLLPEVV  F+PPFRLCPP  RSQL D
Sbjct: 377  DRPLYEREGDRLLDGLGPRFIDWWYPKPLPVDGDLLPEVVPGFKPPFRLCPPRVRSQLTD 436

Query: 1212 DELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQMSW 1033
            D+LTYLRK+A PLP HFVLGRN+KLQGLAAAILKLWEKS+IAKIAVKWG+PNT N  M+ 
Sbjct: 437  DDLTYLRKVARPLPVHFVLGRNSKLQGLAAAILKLWEKSVIAKIAVKWGVPNTNNELMAS 496

Query: 1032 ELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFESF 853
            ELKRLTGGVL+LRNKF+I+LYRGKDFLP +VA+++ ER+ ++    L EE AR +A E  
Sbjct: 497  ELKRLTGGVLLLRNKFFIVLYRGKDFLPCNVADAVVERDLELQQWQLHEEEARLKAAEIL 556

Query: 852  HAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKLLI 673
            +  DE+    S  GTFSEFQ I T   +      E +V+LEAEK++LEKEL +QE KL I
Sbjct: 557  NTNDETSADKSVVGTFSEFQNIKTICRNAHINRDEAEVKLEAEKEKLEKELGRQEHKLAI 616

Query: 672  LQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVFDS 493
            L++K  ++E+ L KLNSA +P ++  DQE++T EER+  RKIGLKM + L LGRRGVFD 
Sbjct: 617  LKIKIAKAERELWKLNSALNPSEQEPDQELITEEERECFRKIGLKMNRVLELGRRGVFDG 676

Query: 492  VIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYRGK 313
            VI  +HQHWKHREVV+V++MQK F QV+ +A  LE ES GILV +EKL+KGHAIIIYRGK
Sbjct: 677  VIEGLHQHWKHREVVKVISMQKTFLQVLCTAKTLERESDGILVCIEKLKKGHAIIIYRGK 736

Query: 312  NYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            NY+RP+    ENLL KR+AL RS EMQR G L++F YQR+  I DL
Sbjct: 737  NYKRPVHF-GENLLDKRKALKRSLEMQRLGSLRFFAYQRNMEIADL 781


>ref|XP_007033220.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
            cacao] gi|508712249|gb|EOY04146.1| maize chloroplast
            splicing factor CRS1, putative isoform 4 [Theobroma
            cacao]
          Length = 767

 Score =  586 bits (1511), Expect = e-164
 Identities = 308/539 (57%), Positives = 387/539 (71%), Gaps = 13/539 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EI+ AWR+ EL MVKFG+PLCRNM+RA EI+E KT GLVVW KKD LVVYRGC++ L 
Sbjct: 224  VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 283

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGL------------ 1429
            S++S+  +   A +G+ I       +T S +   +  +       +GL            
Sbjct: 284  SKISSMKYPRCA-DGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPI 342

Query: 1428 -VLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPF 1252
             +  K +   Q V  +LYERE +R+LDGLGPRFIDWW  KPLPIDADLLPE V  FRPP 
Sbjct: 343  NIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPL 402

Query: 1251 RLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVK 1072
            RL PP TR  L DDEL YLRKL  PLP HF LG+N  LQGLAAAILKLWEKSLIAKIA+K
Sbjct: 403  RLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIK 462

Query: 1071 WGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLL 892
            WGI NT N QM++ELK LTGGVL++RNKF +ILYRGKDFLP  VAN + ERE  +    L
Sbjct: 463  WGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQL 522

Query: 891  DEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRL 712
            +EE AR +  E+    DE L   ST GT SEF+ I T+ G L+ ++ E+++QLEA+K+ L
Sbjct: 523  NEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENL 582

Query: 711  EKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMG 532
            E+ELR QERKL IL +K ++S K LAKL S+  P ++ +D E++T EER+ LRKIGLK+ 
Sbjct: 583  ERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLN 642

Query: 531  QTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEK 352
              L+LGRRGVF+ VI  ++QHWKHREVV+V+TMQ+ F++V+ +A  L  E+GGILV+VEK
Sbjct: 643  SFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEK 702

Query: 351  LRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            L++GHA+IIYRGKNYRRPLKL+  NLL KREAL +S E+QR G LK+F YQR + I DL
Sbjct: 703  LKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDL 761


>ref|XP_007033219.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
            cacao] gi|508712248|gb|EOY04145.1| maize chloroplast
            splicing factor CRS1, putative isoform 3 [Theobroma
            cacao]
          Length = 788

 Score =  586 bits (1511), Expect = e-164
 Identities = 308/539 (57%), Positives = 387/539 (71%), Gaps = 13/539 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EI+ AWR+ EL MVKFG+PLCRNM+RA EI+E KT GLVVW KKD LVVYRGC++ L 
Sbjct: 224  VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 283

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGL------------ 1429
            S++S+  +   A +G+ I       +T S +   +  +       +GL            
Sbjct: 284  SKISSMKYPRCA-DGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPI 342

Query: 1428 -VLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPF 1252
             +  K +   Q V  +LYERE +R+LDGLGPRFIDWW  KPLPIDADLLPE V  FRPP 
Sbjct: 343  NIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPL 402

Query: 1251 RLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVK 1072
            RL PP TR  L DDEL YLRKL  PLP HF LG+N  LQGLAAAILKLWEKSLIAKIA+K
Sbjct: 403  RLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIK 462

Query: 1071 WGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLL 892
            WGI NT N QM++ELK LTGGVL++RNKF +ILYRGKDFLP  VAN + ERE  +    L
Sbjct: 463  WGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQL 522

Query: 891  DEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRL 712
            +EE AR +  E+    DE L   ST GT SEF+ I T+ G L+ ++ E+++QLEA+K+ L
Sbjct: 523  NEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENL 582

Query: 711  EKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMG 532
            E+ELR QERKL IL +K ++S K LAKL S+  P ++ +D E++T EER+ LRKIGLK+ 
Sbjct: 583  ERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLN 642

Query: 531  QTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEK 352
              L+LGRRGVF+ VI  ++QHWKHREVV+V+TMQ+ F++V+ +A  L  E+GGILV+VEK
Sbjct: 643  SFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEK 702

Query: 351  LRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            L++GHA+IIYRGKNYRRPLKL+  NLL KREAL +S E+QR G LK+F YQR + I DL
Sbjct: 703  LKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDL 761


>ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao] gi|508712247|gb|EOY04144.1| maize chloroplast
            splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  586 bits (1511), Expect = e-164
 Identities = 308/539 (57%), Positives = 387/539 (71%), Gaps = 13/539 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EI+ AWR+ EL MVKFG+PLCRNM+RA EI+E KT GLVVW KKD LVVYRGC++ L 
Sbjct: 250  VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 309

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGL------------ 1429
            S++S+  +   A +G+ I       +T S +   +  +       +GL            
Sbjct: 310  SKISSMKYPRCA-DGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPI 368

Query: 1428 -VLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPF 1252
             +  K +   Q V  +LYERE +R+LDGLGPRFIDWW  KPLPIDADLLPE V  FRPP 
Sbjct: 369  NIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPL 428

Query: 1251 RLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVK 1072
            RL PP TR  L DDEL YLRKL  PLP HF LG+N  LQGLAAAILKLWEKSLIAKIA+K
Sbjct: 429  RLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIK 488

Query: 1071 WGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLL 892
            WGI NT N QM++ELK LTGGVL++RNKF +ILYRGKDFLP  VAN + ERE  +    L
Sbjct: 489  WGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQL 548

Query: 891  DEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRL 712
            +EE AR +  E+    DE L   ST GT SEF+ I T+ G L+ ++ E+++QLEA+K+ L
Sbjct: 549  NEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENL 608

Query: 711  EKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMG 532
            E+ELR QERKL IL +K ++S K LAKL S+  P ++ +D E++T EER+ LRKIGLK+ 
Sbjct: 609  ERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLN 668

Query: 531  QTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEK 352
              L+LGRRGVF+ VI  ++QHWKHREVV+V+TMQ+ F++V+ +A  L  E+GGILV+VEK
Sbjct: 669  SFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEK 728

Query: 351  LRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            L++GHA+IIYRGKNYRRPLKL+  NLL KREAL +S E+QR G LK+F YQR + I DL
Sbjct: 729  LKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDL 787


>ref|XP_007033217.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao] gi|508712246|gb|EOY04143.1| maize chloroplast
            splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  586 bits (1511), Expect = e-164
 Identities = 308/539 (57%), Positives = 387/539 (71%), Gaps = 13/539 (2%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EI+ AWR+ EL MVKFG+PLCRNM+RA EI+E KT GLVVW KKD LVVYRGC++ L 
Sbjct: 250  VDEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLT 309

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGL------------ 1429
            S++S+  +   A +G+ I       +T S +   +  +       +GL            
Sbjct: 310  SKISSMKYPRCA-DGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPI 368

Query: 1428 -VLGKNNGIIQSVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPF 1252
             +  K +   Q V  +LYERE +R+LDGLGPRFIDWW  KPLPIDADLLPE V  FRPP 
Sbjct: 369  NIFMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPL 428

Query: 1251 RLCPPWTRSQLKDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVK 1072
            RL PP TR  L DDEL YLRKL  PLP HF LG+N  LQGLAAAILKLWEKSLIAKIA+K
Sbjct: 429  RLSPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIK 488

Query: 1071 WGIPNTKNAQMSWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLL 892
            WGI NT N QM++ELK LTGGVL++RNKF +ILYRGKDFLP  VAN + ERE  +    L
Sbjct: 489  WGIQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQL 548

Query: 891  DEEAARSRAFESFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRL 712
            +EE AR +  E+    DE L   ST GT SEF+ I T+ G L+ ++ E+++QLEA+K+ L
Sbjct: 549  NEEGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENL 608

Query: 711  EKELRKQERKLLILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMG 532
            E+ELR QERKL IL +K ++S K LAKL S+  P ++ +D E++T EER+ LRKIGLK+ 
Sbjct: 609  ERELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLN 668

Query: 531  QTLLLGRRGVFDSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEK 352
              L+LGRRGVF+ VI  ++QHWKHREVV+V+TMQ+ F++V+ +A  L  E+GGILV+VEK
Sbjct: 669  SFLVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEK 728

Query: 351  LRKGHAIIIYRGKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            L++GHA+IIYRGKNYRRPLKL+  NLL KREAL +S E+QR G LK+F YQR + I DL
Sbjct: 729  LKEGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDL 787


>ref|XP_012491296.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium raimondii]
            gi|763775949|gb|KJB43072.1| hypothetical protein
            B456_007G182400 [Gossypium raimondii]
          Length = 734

 Score =  585 bits (1507), Expect = e-164
 Identities = 316/528 (59%), Positives = 380/528 (71%), Gaps = 2/528 (0%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EIR  WR  EL M+KFG+PLCRNM+RA EIVE KTGGLVVW KKD LVVYRG N+ L 
Sbjct: 208  VDEIRLVWRNNELVMLKFGVPLCRNMDRASEIVEMKTGGLVVWCKKDVLVVYRGQNHWLT 267

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDD--ITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQ 1399
            S            NG+ +  ++  D   T+SQ ++ A+  G+      G    +NN   Q
Sbjct: 268  S------------NGRRVFNNLASDNNTTMSQEKSNASTWGRS---LNGEDRDENN---Q 309

Query: 1398 SVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQL 1219
             V  +LYERE +R+LDGLGPRFIDWW  KPLP+DADLLPEVV  FRPP RL PP TR +L
Sbjct: 310  PVVGSLYERETDRLLDGLGPRFIDWWMRKPLPVDADLLPEVVPGFRPPTRLSPPKTRPKL 369

Query: 1218 KDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQM 1039
             D+ELT LRKLA PLP HF LGRN  LQGLA AILKLWEKSLIAKIA+KWG  NT N QM
Sbjct: 370  TDEELTNLRKLAHPLPFHFALGRNRNLQGLANAILKLWEKSLIAKIAIKWGAQNTDNEQM 429

Query: 1038 SWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFE 859
            + ELK LTGGVL+LRNKF II YRGKDFLP  VANS+ ERE  +    L EE AR +  E
Sbjct: 430  ANELKDLTGGVLLLRNKFLIIFYRGKDFLPQGVANSVMEREMALRRCQLIEEDARVKVAE 489

Query: 858  SFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKL 679
            +F   +E L   ST GT +EFQ I TK G L+ +N E+++Q+EA+K+ LE+ELR QERKL
Sbjct: 490  TFQVANEPLAKTSTVGTLAEFQDIQTKYGVLEKENNELEIQIEAQKENLERELRNQERKL 549

Query: 678  LILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVF 499
             IL  K ++S   LAKLNS+    +  LD E +T EER+ LRKIGLK+   L LGRRGVF
Sbjct: 550  AILNGKIEKSATKLAKLNSSWQTAEPDLDLETITEEERECLRKIGLKLSSCLFLGRRGVF 609

Query: 498  DSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYR 319
            + VI  +HQHWKHREVV+V+TMQ+AF +V+ +A +L  ESGGILV+VEKL++GHAIIIYR
Sbjct: 610  NGVIEGVHQHWKHREVVKVITMQRAFLRVIYTAKMLVAESGGILVSVEKLKEGHAIIIYR 669

Query: 318  GKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            GKNYRRP KL+ ++LL KREAL RS E+QR G LK+F YQR + I DL
Sbjct: 670  GKNYRRPSKLMTDHLLTKREALQRSIELQRIGSLKFFAYQRRQAILDL 717


>gb|KHG25518.1| hypothetical protein F383_03195 [Gossypium arboreum]
          Length = 737

 Score =  584 bits (1506), Expect = e-164
 Identities = 316/528 (59%), Positives = 385/528 (72%), Gaps = 2/528 (0%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVETKTGGLVVWSKKDTLVVYRGCNYQLP 1573
            V+EIR AW   EL M+KFG+PLCRNM+RA EIVE KTGGLVVW KKD LVVYRG N+ L 
Sbjct: 211  VDEIRLAWGNNELVMLKFGVPLCRNMDRASEIVEMKTGGLVVWCKKDILVVYRGQNHWLT 270

Query: 1572 SEVSTELHSGFAFNGKIIVGDVEDD--ITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQ 1399
            S            NG+ +  ++  D   T+S  ++ A+   +  L+  G    +NN   Q
Sbjct: 271  S------------NGQRVFNNLASDNNTTMSPEKSNAST-WRRSLN--GEDRDENN---Q 312

Query: 1398 SVNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQL 1219
             V  +LYERE +R+LDGLGPRFIDWW  KPLP+DADLLPEVV  F+PP RL PP TR +L
Sbjct: 313  PVVGSLYERETDRLLDGLGPRFIDWWMRKPLPVDADLLPEVVPGFKPPTRLSPPKTRPKL 372

Query: 1218 KDDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQM 1039
             D+ELT LRKLA PLP HFVLGRN  LQGLA +ILKLWEKSLIAKIA+KWG+ NT N QM
Sbjct: 373  TDEELTNLRKLAHPLPFHFVLGRNRNLQGLANSILKLWEKSLIAKIAIKWGVQNTDNEQM 432

Query: 1038 SWELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFE 859
            + ELK LTGGVL+LRNKF II YRGKDFLP  VANS+ ERE  +    L EE AR +  E
Sbjct: 433  ANELKDLTGGVLLLRNKFLIIFYRGKDFLPQGVANSVMEREMALRRCQLIEEGARVKVAE 492

Query: 858  SFHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKL 679
            +F   +ESL   ST GT +EFQ I TK G L+ +N E+++Q+EA+K+ LE+ELR QERKL
Sbjct: 493  TFQVANESLAKTSTVGTLAEFQDIQTKYGVLEKENNELEIQIEAQKENLERELRNQERKL 552

Query: 678  LILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVF 499
             IL  K ++S K LAKLNS+    +  LD E +T EER+ LRKIGLK+   L+LGRRGVF
Sbjct: 553  AILNGKIEKSAKKLAKLNSSWQTAEPDLDLETITEEERECLRKIGLKLSSCLVLGRRGVF 612

Query: 498  DSVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYR 319
            + VI  +HQHWKHREVV+V+TMQ+AF +V+ +A +L  ESGGILV+VEKL++GHAIIIYR
Sbjct: 613  NGVIEGVHQHWKHREVVKVITMQRAFLRVIYTAKMLVAESGGILVSVEKLKEGHAIIIYR 672

Query: 318  GKNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDL 175
            GKNYRRP KL+ ++LL KREAL RS E+QR G LK+F YQR + I DL
Sbjct: 673  GKNYRRPSKLMTDHLLTKREALQRSIELQRIGSLKFFAYQRRQAILDL 720


>ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Musa acuminata subsp.
            malaccensis]
          Length = 769

 Score =  583 bits (1504), Expect = e-163
 Identities = 314/529 (59%), Positives = 384/529 (72%), Gaps = 1/529 (0%)
 Frame = -2

Query: 1752 VEEIRKAWREGELAMVKFGLPLCRNMERAMEIVE-TKTGGLVVWSKKDTLVVYRGCNYQL 1576
            +EEIR+ W+E EL MV+   PL RNM+RA EIVE TKTGGLVVW K+D LVVYRG  Y++
Sbjct: 246  MEEIRRGWKENELVMVRIVEPLRRNMDRAREIVEQTKTGGLVVWCKRDFLVVYRGQKYEM 305

Query: 1575 PSEVSTELHSGFAFNGKIIVGDVEDDITLSQHRTTATNEGKEGLHPAGLVLGKNNGIIQS 1396
                 +   S  A N K+  G  E+D  +    +    +G+  +  +G+ +G       S
Sbjct: 306  FRNAPS---SPNAVN-KVNPGIFEEDSAIVSG-SVVKMDGEVQIMESGIQMGDI-----S 355

Query: 1395 VNVTLYEREANRILDGLGPRFIDWWRPKPLPIDADLLPEVVRNFRPPFRLCPPWTRSQLK 1216
            +  +LYEREA+R+LDGLGPRF+DWW  KPLP+DADLLPEVV  FRPP R+CPP  R +L 
Sbjct: 356  IEGSLYEREADRLLDGLGPRFVDWWWQKPLPVDADLLPEVVPGFRPPLRMCPPGVRPKLT 415

Query: 1215 DDELTYLRKLACPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKIAVKWGIPNTKNAQMS 1036
            DDEL YLRKLA PLPTHF LGRN KLQGLAA+I KLWEKSLIAKIAVK GI NT N QMS
Sbjct: 416  DDELMYLRKLARPLPTHFALGRNRKLQGLAASIRKLWEKSLIAKIAVKVGIQNTNNEQMS 475

Query: 1035 WELKRLTGGVLILRNKFYIILYRGKDFLPPSVANSIAERETKINTKLLDEEAARSRAFES 856
             ELKRLTGGVLILRNKF+IILYRGKDFLP  V N I ERE ++N + L+EE AR+    S
Sbjct: 476  LELKRLTGGVLILRNKFFIILYRGKDFLPGGVTNLIDEREAELNEQQLEEEKARTGFTNS 535

Query: 855  FHAIDESLPIPSTSGTFSEFQYIHTKSGHLQDKNWEIKVQLEAEKQRLEKELRKQERKLL 676
              A+D  LP  S  GT+ EFQ I      L + ++  ++++EAE+++L+KELR+ E KL 
Sbjct: 536  LRAMDNILPSFSIVGTYMEFQEIQANHISLNNLSYRGQIRIEAEREKLKKELREHEHKLF 595

Query: 675  ILQLKTKRSEKALAKLNSACSPGDRTLDQEMLTVEERQTLRKIGLKMGQTLLLGRRGVFD 496
            IL+ K +RSE+ L+KL+ +C P ++T D E+LT EERQ  RK+GL+M + +LLGRRG++D
Sbjct: 596  ILKQKIERSEELLSKLSLSCCPSEQTADLEILTEEERQAFRKVGLEMNEIILLGRRGIYD 655

Query: 495  SVIGSIHQHWKHREVVRVLTMQKAFSQVMNSATLLEIESGGILVAVEKLRKGHAIIIYRG 316
             V GSIHQHWKHREVV+VLT QKAF  +  +A LLE+ESGGILVAVEKLR  HAIIIYRG
Sbjct: 656  GVFGSIHQHWKHREVVKVLTKQKAFHHITCTARLLEVESGGILVAVEKLRTSHAIIIYRG 715

Query: 315  KNYRRPLKLVPENLLRKREALLRSKEMQRRGCLKYFTYQRHRTIWDLNQ 169
            KNY RPLK    NLL KREAL RS E+QRRG LKYF  QR + IW+L Q
Sbjct: 716  KNYARPLK-PSNNLLSKREALQRSIEIQRRGSLKYFARQREKLIWELTQ 763