BLASTX nr result
ID: Cinnamomum25_contig00011222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00011222
(338 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II su... 144 2e-32
gb|KJB71267.1| hypothetical protein B456_011G113800 [Gossypium r... 142 1e-31
ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II su... 142 1e-31
gb|KHG12393.1| DNA-directed RNA polymerase II subunit RPB4 [Goss... 142 1e-31
gb|KHG11711.1| DNA-directed RNA polymerase II subunit RPB4 [Goss... 142 1e-31
ref|XP_006847979.1| PREDICTED: DNA-directed RNA polymerase II su... 141 1e-31
ref|XP_010271756.1| PREDICTED: DNA-directed RNA polymerase II su... 141 2e-31
ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isofor... 140 3e-31
ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II su... 139 6e-31
gb|KCW54360.1| hypothetical protein EUGRSUZ_I00318 [Eucalyptus g... 139 6e-31
ref|XP_010027764.1| PREDICTED: DNA-directed RNA polymerase II su... 139 6e-31
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 139 6e-31
gb|KDO59898.1| hypothetical protein CISIN_1g0325682mg, partial [... 139 7e-31
ref|XP_006494737.1| PREDICTED: DNA-directed RNA polymerase II su... 139 7e-31
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 139 7e-31
ref|XP_008245583.1| PREDICTED: DNA-directed RNA polymerase II su... 139 1e-30
ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II su... 139 1e-30
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 139 1e-30
ref|XP_007206127.1| hypothetical protein PRUPE_ppa013142mg [Prun... 139 1e-30
ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II su... 138 1e-30
>ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
[Nelumbo nucifera]
Length = 138
Score = 144 bits (363), Expect = 2e-32
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEVALILDRKY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>gb|KJB71267.1| hypothetical protein B456_011G113800 [Gossypium raimondii]
Length = 134
Score = 142 bits (357), Expect = 1e-31
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IGEEFLKAKCLMNCEVALIL+ KY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|823248799|ref|XP_012457051.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|763770918|gb|KJB38133.1| hypothetical
protein B456_006G238100 [Gossypium raimondii]
gi|763804330|gb|KJB71268.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
gi|763804331|gb|KJB71269.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
Length = 138
Score = 142 bits (357), Expect = 1e-31
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IGEEFLKAKCLMNCEVALIL+ KY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>gb|KHG12393.1| DNA-directed RNA polymerase II subunit RPB4 [Gossypium arboreum]
gi|763770919|gb|KJB38134.1| hypothetical protein
B456_006G238100 [Gossypium raimondii]
Length = 124
Score = 142 bits (357), Expect = 1e-31
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IGEEFLKAKCLMNCEVALIL+ KY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>gb|KHG11711.1| DNA-directed RNA polymerase II subunit RPB4 [Gossypium arboreum]
Length = 135
Score = 142 bits (357), Expect = 1e-31
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IGEEFLKAKCLMNCEVALIL+ KY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 2 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 61
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 62 YVKRFSRYKNPDAVR 76
>ref|XP_006847979.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Amborella
trichopoda] gi|769807577|ref|XP_011624688.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Amborella
trichopoda] gi|548851284|gb|ERN09560.1| hypothetical
protein AMTR_s00029p00159420 [Amborella trichopoda]
Length = 139
Score = 141 bits (356), Expect = 1e-31
Identities = 69/75 (92%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IGEEFLKAKCLMNCEVALILD KY+QLQQMSDDP NQISQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDHKYEQLQQMSDDPSNQISQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_010271756.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Nelumbo
nucifera]
Length = 138
Score = 141 bits (355), Expect = 2e-31
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEEDENAAEL IG+EFLKAKCLMNCEV+LILDR+Y+QLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEDENAAELKIGDEFLKAKCLMNCEVSLILDRRYEQLQQMSDDPTNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|590707933|ref|XP_007048136.1| RNA polymerase II,
Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700396|gb|EOX92292.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 140 bits (353), Expect = 3e-31
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IGEEFLKAKCLMNCEVALIL+ KY+QLQQMS+DPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha
curcas]
Length = 138
Score = 139 bits (351), Expect = 6e-31
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENA+EL IG+EFLKAKCLMNCEVALIL+ KY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>gb|KCW54360.1| hypothetical protein EUGRSUZ_I00318 [Eucalyptus grandis]
Length = 97
Score = 139 bits (351), Expect = 6e-31
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEV+LIL+ KY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_010027764.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|702459506|ref|XP_010027765.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|702459510|ref|XP_010027766.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|629088105|gb|KCW54358.1| hypothetical
protein EUGRSUZ_I00318 [Eucalyptus grandis]
gi|629088106|gb|KCW54359.1| hypothetical protein
EUGRSUZ_I00318 [Eucalyptus grandis]
Length = 138
Score = 139 bits (351), Expect = 6e-31
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEV+LIL+ KY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|743823365|ref|XP_011021942.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743823373|ref|XP_011021944.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743837931|ref|XP_011025594.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 139 bits (351), Expect = 6e-31
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG++FLKAKCLMNCEVALIL+ KY+QLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>gb|KDO59898.1| hypothetical protein CISIN_1g0325682mg, partial [Citrus sinensis]
Length = 78
Score = 139 bits (350), Expect = 7e-31
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEVA+ILD KY+QLQQ SDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_006494737.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like isoform X1
[Citrus sinensis]
Length = 169
Score = 139 bits (350), Expect = 7e-31
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEVA+ILD KY+QLQQ SDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 139 bits (350), Expect = 7e-31
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEVA+ILD KY+QLQQ SDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_008245583.1| PREDICTED: DNA-directed RNA polymerase II subunit 4, partial
[Prunus mume]
Length = 113
Score = 139 bits (349), Expect = 1e-30
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEVALIL+ KYDQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAV+
Sbjct: 61 YVKRFSRYKNPDAVK 75
>ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Solanum
tuberosum]
Length = 138
Score = 139 bits (349), Expect = 1e-30
Identities = 67/75 (89%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEVALIL+ KY+QLQQMSDDP NQISQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Cicer
arietinum]
Length = 138
Score = 139 bits (349), Expect = 1e-30
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEV+LILD KY+QLQQ SDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAVR
Sbjct: 61 YVKRFSRYKNPDAVR 75
>ref|XP_007206127.1| hypothetical protein PRUPE_ppa013142mg [Prunus persica]
gi|462401769|gb|EMJ07326.1| hypothetical protein
PRUPE_ppa013142mg [Prunus persica]
Length = 138
Score = 139 bits (349), Expect = 1e-30
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IG+EFLKAKCLMNCEVALIL+ KYDQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+NPDAV+
Sbjct: 61 YVKRFSRYKNPDAVK 75
>ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Elaeis
guineensis]
Length = 138
Score = 138 bits (348), Expect = 1e-30
Identities = 67/75 (89%), Positives = 72/75 (96%)
Frame = +3
Query: 114 MSGEEDENAAELNIGEEFLKAKCLMNCEVALILDRKYDQLQQMSDDPMNQISQVFEKSLQ 293
MSGEE+ENAAEL IGEEFLKAKCLMNCEVALILDRKY+QLQQ+SDDP NQISQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDRKYEQLQQLSDDPTNQISQVFEKSMQ 60
Query: 294 YVKRFSRYQNPDAVR 338
YVKRFSRY+N DAVR
Sbjct: 61 YVKRFSRYKNQDAVR 75