BLASTX nr result
ID: Cinnamomum25_contig00011110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00011110
(705 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010917991.1| PREDICTED: DNA-directed RNA polymerase III s... 224 5e-56
ref|XP_010917993.1| PREDICTED: DNA-directed RNA polymerase III s... 223 6e-56
ref|XP_008798504.1| PREDICTED: DNA-directed RNA polymerase III s... 221 3e-55
ref|XP_010278155.1| PREDICTED: DNA-directed RNA polymerase III s... 213 7e-53
ref|XP_010265332.1| PREDICTED: DNA-directed RNA polymerase III s... 213 7e-53
ref|XP_010917992.1| PREDICTED: DNA-directed RNA polymerase III s... 211 2e-52
ref|XP_009403932.1| PREDICTED: DNA-directed RNA polymerase III s... 210 6e-52
ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-contai... 204 4e-50
gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japo... 201 3e-49
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s... 201 4e-49
gb|KCW84674.1| hypothetical protein EUGRSUZ_B01492 [Eucalyptus g... 199 1e-48
ref|XP_010038840.1| PREDICTED: DNA-directed RNA polymerase III s... 199 1e-48
ref|XP_012441685.1| PREDICTED: DNA-directed RNA polymerase III s... 199 1e-48
ref|XP_008365292.1| PREDICTED: DNA-directed RNA polymerase III s... 199 1e-48
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp.... 199 1e-48
ref|XP_011621603.1| PREDICTED: DNA-directed RNA polymerase III s... 198 2e-48
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s... 198 2e-48
ref|XP_003629059.1| DNA-directed RNA polymerase III subunit RPC8... 198 3e-48
ref|XP_010087136.1| DNA-directed RNA polymerase III subunit rpc8... 197 5e-48
ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III s... 197 5e-48
>ref|XP_010917991.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Elaeis guineensis]
Length = 210
Score = 224 bits (570), Expect = 5e-56
Identities = 112/181 (61%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
Frame = -2
Query: 545 GIR-PMFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVE 369
G+R MF LS IEH + +PPHLLS PL++A+K ELERLFLDKVI +LGLC+SVYDI +E
Sbjct: 18 GVRGTMFYLSLIEHNLPVPPHLLSRPLLDAVKEELERLFLDKVISSLGLCVSVYDIQSIE 77
Query: 368 DGFIVPGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIP 189
GFI PG+G+ TY+V+FRLVMFRPFVGEIL G+IEKS DGLRL+LGFF+DI+VPVHL+
Sbjct: 78 GGFIFPGDGSSTYKVVFRLVMFRPFVGEILGGRIEKSSADGLRLSLGFFNDIYVPVHLLQ 137
Query: 188 SPNRI-ENGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPME 12
P ++ + IW+W + E+ LDLN+++ FRV IKYP IP E K+DAE F+PME
Sbjct: 138 QPCKLGPDNIWIW-----QHECGELTLDLNEEVHFRVADIKYPSIPIEQKEDAEPFAPME 192
Query: 11 I 9
I
Sbjct: 193 I 193
>ref|XP_010917993.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X3
[Elaeis guineensis] gi|743775232|ref|XP_010917994.1|
PREDICTED: DNA-directed RNA polymerase III subunit RPC8
isoform X3 [Elaeis guineensis]
Length = 188
Score = 223 bits (569), Expect = 6e-56
Identities = 110/176 (62%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + +PPHLLS PL++A+K ELERLFLDKVI +LGLC+SVYDI +E GFI
Sbjct: 1 MFYLSLIEHNLPVPPHLLSRPLLDAVKEELERLFLDKVISSLGLCVSVYDIQSIEGGFIF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+G+ TY+V+FRLVMFRPFVGEIL G+IEKS DGLRL+LGFF+DI+VPVHL+ P ++
Sbjct: 61 PGDGSSTYKVVFRLVMFRPFVGEILGGRIEKSSADGLRLSLGFFNDIYVPVHLLQQPCKL 120
Query: 173 -ENGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPMEI 9
+ IW+W + E+ LDLN+++ FRV IKYP IP E K+DAE F+PMEI
Sbjct: 121 GPDNIWIW-----QHECGELTLDLNEEVHFRVADIKYPSIPIEQKEDAEPFAPMEI 171
>ref|XP_008798504.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Phoenix
dactylifera] gi|672157578|ref|XP_008798505.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Phoenix
dactylifera] gi|672157580|ref|XP_008798506.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Phoenix
dactylifera] gi|672157582|ref|XP_008798507.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Phoenix
dactylifera] gi|672157584|ref|XP_008798508.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Phoenix
dactylifera] gi|672157586|ref|XP_008798509.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Phoenix
dactylifera]
Length = 188
Score = 221 bits (563), Expect = 3e-55
Identities = 110/176 (62%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + +PPHLL+ PL +A+K ELERLFLDKVI NLGLCISVYDI +E GFI
Sbjct: 1 MFYLSLIEHNLPVPPHLLNRPLRDAIKEELERLFLDKVISNLGLCISVYDIQSIEGGFIF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+G+ TY+V+FRLVMFRPFVGEIL G+IEKS DGLRL+LGFF+DI+VPVHL+ P ++
Sbjct: 61 PGDGSSTYKVVFRLVMFRPFVGEILSGRIEKSNADGLRLSLGFFNDIYVPVHLLQQPCKL 120
Query: 173 ENG-IWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPMEI 9
G IW+W + E+ LDL +++ FRV I+YP IP E K+DAE F+PMEI
Sbjct: 121 GPGDIWIW-----QHECGELTLDLKEEVHFRVADIRYPSIPIEQKEDAEPFAPMEI 171
>ref|XP_010278155.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Nelumbo nucifera] gi|720071765|ref|XP_010278156.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC8-like [Nelumbo nucifera]
Length = 193
Score = 213 bits (543), Expect = 7e-53
Identities = 106/183 (57%), Positives = 134/183 (73%), Gaps = 7/183 (3%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + LPPHLL+LPL EA+KGELE LFLDKVIPNLGLCIS+YDI ++DGFI
Sbjct: 1 MFFLSLIEHTLCLPPHLLNLPLDEAIKGELETLFLDKVIPNLGLCISIYDIRDIKDGFIY 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GA TY V FRLVMFRPFVGEI+ GK++ S +GL+L++ FF DIH+PVHL+P+P+ +
Sbjct: 61 PGDGASTYTVQFRLVMFRPFVGEIIVGKLKSSDANGLKLSISFFDDIHIPVHLLPNPSSL 120
Query: 173 -------ENGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPM 15
G+W W + + + D +IRFRV SI YPPIP E +K+A+ F+PM
Sbjct: 121 MPNPENKHQGVWSWEFQDEQYPI-----DGKDEIRFRVHSISYPPIPIEQEKEAKPFAPM 175
Query: 14 EIT 6
IT
Sbjct: 176 VIT 178
>ref|XP_010265332.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Nelumbo nucifera] gi|720029819|ref|XP_010265333.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC8-like [Nelumbo nucifera]
gi|720029822|ref|XP_010265334.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like [Nelumbo nucifera]
gi|720029825|ref|XP_010265335.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like [Nelumbo nucifera]
Length = 193
Score = 213 bits (543), Expect = 7e-53
Identities = 107/183 (58%), Positives = 133/183 (72%), Gaps = 7/183 (3%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + LPPHLL LPL EA+KGELE LFLDKVIPNLGLCIS+YDI ++DGFI
Sbjct: 1 MFFLSLIEHTLRLPPHLLKLPLDEAIKGELEALFLDKVIPNLGLCISIYDIGDIKDGFIY 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GA TY V FRL+MFRPFVGEI+ GK++ S +GL L++GFF DIH+PVHL+P+P+ +
Sbjct: 61 PGDGASTYTVQFRLIMFRPFVGEIIVGKLKSSDANGLNLSVGFFDDIHIPVHLLPNPSSL 120
Query: 173 -------ENGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPM 15
GIW W + + + D +IRFRV SI YPPIP E +K+A+ F+PM
Sbjct: 121 TLDPENKHEGIWTWEFQDEQYPI-----DGKDEIRFRVHSISYPPIPIEQEKEAKPFAPM 175
Query: 14 EIT 6
IT
Sbjct: 176 VIT 178
>ref|XP_010917992.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
[Elaeis guineensis]
Length = 196
Score = 211 bits (538), Expect = 2e-52
Identities = 103/164 (62%), Positives = 130/164 (79%), Gaps = 1/164 (0%)
Frame = -2
Query: 497 LPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIVPGEGAPTYEVIF 318
+PPHLLS PL++A+K ELERLFLDKVI +LGLC+SVYDI +E GFI PG+G+ TY+V+F
Sbjct: 21 VPPHLLSRPLLDAVKEELERLFLDKVISSLGLCVSVYDIQSIEGGFIFPGDGSSTYKVVF 80
Query: 317 RLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI-ENGIWVWLYGS 141
RLVMFRPFVGEIL G+IEKS DGLRL+LGFF+DI+VPVHL+ P ++ + IW+W
Sbjct: 81 RLVMFRPFVGEILGGRIEKSSADGLRLSLGFFNDIYVPVHLLQQPCKLGPDNIWIW---- 136
Query: 140 SEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPMEI 9
+ E+ LDLN+++ FRV IKYP IP E K+DAE F+PMEI
Sbjct: 137 -QHECGELTLDLNEEVHFRVADIKYPSIPIEQKEDAEPFAPMEI 179
>ref|XP_009403932.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
[Musa acuminata subsp. malaccensis]
gi|694998317|ref|XP_009403937.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 188
Score = 210 bits (535), Expect = 6e-52
Identities = 101/176 (57%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + LPPHLL+ PL++A+K ELERLFLDKV+ NLGLCIS+YDI +E GF+
Sbjct: 1 MFCLSLIEHNLPLPPHLLNRPLLDAIKEELERLFLDKVLSNLGLCISIYDIRTIEGGFVF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+G+ TY+V+FRL+MFRP+VGEIL GK++ S +GL L+LGFF DI VPVHL+P +R+
Sbjct: 61 PGDGSSTYKVVFRLIMFRPYVGEILCGKLKASDANGLHLSLGFFDDIKVPVHLLPHKSRM 120
Query: 173 -ENGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPMEI 9
++GIW+W E ++ +DL++++ FRV I YPPIP E +A FSPMEI
Sbjct: 121 GDDGIWIW-----EHECGDLPMDLDEEVHFRVTKINYPPIPLEQDANASPFSPMEI 171
>ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
cacao] gi|508702675|gb|EOX94571.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Theobroma cacao]
Length = 210
Score = 204 bits (519), Expect = 4e-50
Identities = 105/186 (56%), Positives = 136/186 (73%), Gaps = 10/186 (5%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + LPPHLL+LPL EA+K ELE LFLDKVI NLGLCISVYDI ++ GFI
Sbjct: 1 MFYLSLIEHTLRLPPHLLNLPLDEAIKIELEALFLDKVIANLGLCISVYDIRSIKGGFIY 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GA TY V FRL++FRPFVGEI+ K+++S +GLRL+LGFF DI++PVHL+P P+R
Sbjct: 61 PGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRLSLGFFDDIYIPVHLLPIPSRF 120
Query: 173 EN-------GIWVWLYGSSEEGVNE---MFLDLNQQIRFRVLSIKYPPIPNEPKKDAERF 24
E+ G W+W +G +EE +E +D QI+FRV S+ YP IP E ++++ F
Sbjct: 121 ESDPNNRNQGRWIWDFGEAEEAQSEEPRFVIDGMDQIKFRVHSVIYPSIPLEQPENSKPF 180
Query: 23 SPMEIT 6
+PM IT
Sbjct: 181 APMVIT 186
>gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japonica Group]
Length = 365
Score = 201 bits (512), Expect = 3e-49
Identities = 112/209 (53%), Positives = 140/209 (66%), Gaps = 10/209 (4%)
Frame = -2
Query: 605 YTIPPTHTIFLLSHCLSPAAGIR---------PMFSLSKIEHKMILPPHLLSLPLVEALK 453
YT T + LSH L+ G R MF LS+IEH + +PPHLLS PLV+A+K
Sbjct: 131 YTTNETPELMPLSHVLATKLGARLTEVRHFSAEMFVLSQIEHNLPMPPHLLSRPLVDAIK 190
Query: 452 GELERLFLDKVIPNLGLCISVYDILKVEDGFIVPGEGAPTYEVIFRLVMFRPFVGEILDG 273
ELERLFLDKV+ NLGLC+SVYDI VE GFI PGEG TY+V FRL+MFRPFVGE+L G
Sbjct: 191 AELERLFLDKVVANLGLCVSVYDIRSVEGGFIFPGEGCSTYKVSFRLLMFRPFVGEVLVG 250
Query: 272 KIEKSGPDGLRLTLGFFSDIHVPVHLIP-SPNRIENGIWVWLYGSSEEGVNEMFLDLNQQ 96
KI GL ++L FFSDI +P HL+ R +G W+ +E+G +E++LDL+ +
Sbjct: 251 KISGYDEKGLHVSLDFFSDISIPGHLMQYGTARALDGRWML---KTEDG-DELYLDLDDE 306
Query: 95 IRFRVLSIKYPPIPNEPKKDAERFSPMEI 9
IRF V SIKYPPIP E K+ F+PM+I
Sbjct: 307 IRFLVSSIKYPPIPVEQKETDRAFAPMQI 335
>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 201 bits (510), Expect = 4e-49
Identities = 102/182 (56%), Positives = 130/182 (71%), Gaps = 7/182 (3%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + LPPHLL LPL EA+KGELE LFLDKVI NLGLCISVYDI ++ GF+
Sbjct: 1 MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GA TY V FRLVMFRPFVGEI+ K+++S +GLRL+LGFF DI++PVHL+P+P
Sbjct: 61 PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120
Query: 173 ENG-------IWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPM 15
E IW+W Y + ++ + +IRF+V S+ YPPIP E K+++ F+PM
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGI-----DEIRFQVQSVSYPPIPVEQPKESKPFAPM 175
Query: 14 EI 9
I
Sbjct: 176 VI 177
>gb|KCW84674.1| hypothetical protein EUGRSUZ_B01492 [Eucalyptus grandis]
Length = 212
Score = 199 bits (507), Expect = 1e-48
Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 14/190 (7%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF+LS IEH + LPPHLLSL L +A+K +LE+LFLDKVI NLGLC+SVYDI K++ GFI
Sbjct: 1 MFNLSLIEHTLRLPPHLLSLSLDKAVKHDLEKLFLDKVIANLGLCVSVYDIRKIDGGFIF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GAPTY V RL++FRPFVGEI+D K+++ DGLRL++GFF DI++P HL+P P+R
Sbjct: 61 PGDGAPTYTVECRLLVFRPFVGEIIDAKLKEFDKDGLRLSMGFFDDIYIPFHLLPYPSRF 120
Query: 173 ----ENG---IWVWLYGSSEEGVNEM-------FLDLNQQIRFRVLSIKYPPIPNEPKKD 36
ENG W+W Y ++ E ++ ++ + IRFRV S+ YP IP E KD
Sbjct: 121 EPDSENGNRFRWIWEYQANGENEDDQTSATVYPIDEIGETIRFRVQSVNYPSIPLEQPKD 180
Query: 35 AERFSPMEIT 6
++ F+PM IT
Sbjct: 181 SKPFAPMVIT 190
>ref|XP_010038840.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Eucalyptus
grandis] gi|702263817|ref|XP_010038848.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Eucalyptus
grandis] gi|629120181|gb|KCW84671.1| hypothetical
protein EUGRSUZ_B01492 [Eucalyptus grandis]
gi|629120182|gb|KCW84672.1| hypothetical protein
EUGRSUZ_B01492 [Eucalyptus grandis]
gi|629120183|gb|KCW84673.1| hypothetical protein
EUGRSUZ_B01492 [Eucalyptus grandis]
Length = 205
Score = 199 bits (507), Expect = 1e-48
Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 14/190 (7%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF+LS IEH + LPPHLLSL L +A+K +LE+LFLDKVI NLGLC+SVYDI K++ GFI
Sbjct: 1 MFNLSLIEHTLRLPPHLLSLSLDKAVKHDLEKLFLDKVIANLGLCVSVYDIRKIDGGFIF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GAPTY V RL++FRPFVGEI+D K+++ DGLRL++GFF DI++P HL+P P+R
Sbjct: 61 PGDGAPTYTVECRLLVFRPFVGEIIDAKLKEFDKDGLRLSMGFFDDIYIPFHLLPYPSRF 120
Query: 173 ----ENG---IWVWLYGSSEEGVNEM-------FLDLNQQIRFRVLSIKYPPIPNEPKKD 36
ENG W+W Y ++ E ++ ++ + IRFRV S+ YP IP E KD
Sbjct: 121 EPDSENGNRFRWIWEYQANGENEDDQTSATVYPIDEIGETIRFRVQSVNYPSIPLEQPKD 180
Query: 35 AERFSPMEIT 6
++ F+PM IT
Sbjct: 181 SKPFAPMVIT 190
>ref|XP_012441685.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128097|ref|XP_012441693.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128099|ref|XP_012441701.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128101|ref|XP_012441706.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128103|ref|XP_012441707.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128105|ref|XP_012441713.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128107|ref|XP_012441721.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128109|ref|XP_012441727.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|823128111|ref|XP_012441736.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8 [Gossypium
raimondii] gi|763743650|gb|KJB11149.1| hypothetical
protein B456_001G243200 [Gossypium raimondii]
gi|763743651|gb|KJB11150.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743652|gb|KJB11151.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743653|gb|KJB11152.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743654|gb|KJB11153.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743655|gb|KJB11154.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
gi|763743656|gb|KJB11155.1| hypothetical protein
B456_001G243200 [Gossypium raimondii]
Length = 210
Score = 199 bits (506), Expect = 1e-48
Identities = 100/186 (53%), Positives = 133/186 (71%), Gaps = 10/186 (5%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + LPPH+L LP+ EA+K ELE LFLDKVI LGLCISVYDI ++ GFI
Sbjct: 1 MFYLSLIEHTLRLPPHILHLPVDEAIKSELETLFLDKVIAKLGLCISVYDIRSIKGGFIF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GA TY V FRL++FRPF+GEI+ K+++S GLRL+LGFF DI++PVHL+P+P+R
Sbjct: 61 PGDGASTYTVEFRLIVFRPFIGEIIVAKLKESDASGLRLSLGFFDDIYIPVHLLPTPSRF 120
Query: 173 E-------NGIWVWLYGSSEEGVNE---MFLDLNQQIRFRVLSIKYPPIPNEPKKDAERF 24
E G W+W +G +EE +E +D + I+FRV S+ YP IP E ++++ F
Sbjct: 121 EAIPNTRNQGRWIWDFGDAEEAQSEEPRFVIDGSDPIKFRVDSVIYPSIPLEQPENSKPF 180
Query: 23 SPMEIT 6
+PM IT
Sbjct: 181 APMVIT 186
>ref|XP_008365292.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Malus
domestica]
Length = 267
Score = 199 bits (506), Expect = 1e-48
Identities = 108/231 (46%), Positives = 147/231 (63%), Gaps = 16/231 (6%)
Frame = -2
Query: 650 TLKILSKKQASSYLRYTIPPTHTIFLLSHCLSPAAGIR---------PMFSLSKIEHKMI 498
T K +++ S P+ LL H L R MF LS+IEH +
Sbjct: 14 TRKASEEEEGSGRKEAVTSPSFVFLLLHHNLQLQFTARRSKKLCRAPQMFYLSRIEHTLR 73
Query: 497 LPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIVPGEGAPTYEVIF 318
LPPHLLSL L +A+KGELE++FLDKVI LGLCISV+ I ++DGFI+P +G PT+ V F
Sbjct: 74 LPPHLLSLRLEDAVKGELEKIFLDKVIAKLGLCISVHSIQSIKDGFILPNDGHPTFRVEF 133
Query: 317 RLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRIE-------NGIW 159
L+MFRPFVGEI+ K+++S +GLRL+LGFF DI+VPVHL+PSP+ E N IW
Sbjct: 134 TLIMFRPFVGEIISAKLKESTANGLRLSLGFFDDIYVPVHLLPSPSCSEPDPEKRNNVIW 193
Query: 158 VWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPMEIT 6
+W ++ ++ ++ +IRF+V S+ YPPIP E +DA+ F+PM IT
Sbjct: 194 IWKCPDAD----DLAVEWTDEIRFQVQSVTYPPIPIEQPEDAKPFAPMVIT 240
>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335460|gb|EFH65877.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 199 bits (506), Expect = 1e-48
Identities = 97/183 (53%), Positives = 133/183 (72%), Gaps = 7/183 (3%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS++EH + +PPHLL+LPL +A+K L+ +FLDKV+ +LGLC+SVYDI +E GF++
Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GA TY+V FR+V+FRPFVGE++ K ++S +GLRLTLGFF DI+VP L+P PNR
Sbjct: 61 PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120
Query: 173 E-------NGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPM 15
E IWVW YG E + + +D + QI+FRV SI YP +P E +DA+ F+PM
Sbjct: 121 EPDPYNRKQMIWVWEYG---EPLEDFIIDDSCQIKFRVESISYPSVPTERAEDAKPFAPM 177
Query: 14 EIT 6
+T
Sbjct: 178 VVT 180
>ref|XP_011621603.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Amborella
trichopoda]
Length = 188
Score = 198 bits (504), Expect = 2e-48
Identities = 96/176 (54%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS +EH LP L++LPL ++++GELE+LFLDKVIPNLGLCISVYDI +E G I
Sbjct: 1 MFCLSLLEHTFRLPAELVALPLPQSIRGELEKLFLDKVIPNLGLCISVYDIRSIEGGLIW 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNR- 177
PGEG+PTY+V FRLVMFRPF+GEIL G +++ DGL+++LGFF D+H+P +L P P+R
Sbjct: 61 PGEGSPTYKVTFRLVMFRPFMGEILVGNVKRLDKDGLQVSLGFFEDVHIPANLFPQPSRF 120
Query: 176 IENGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPMEI 9
+E+G W W + NE ++ ++IRFRV +++YP IP + K +A+ F+PMEI
Sbjct: 121 MEDGTWEWDWDG-----NEQYIYHFEKIRFRVHTVEYPTIPIDQKANAKPFAPMEI 171
>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 198 bits (504), Expect = 2e-48
Identities = 100/182 (54%), Positives = 130/182 (71%), Gaps = 7/182 (3%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS IEH + LPPHLL LPL EA+KGELE LFLDKV+ NLGLCISVYDI ++ GF+
Sbjct: 1 MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GA TY V FRLVMFRPFVGEI+ K+++S +GL+L+LGFF DI++PVHL+P+P
Sbjct: 61 PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120
Query: 173 E-------NGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPM 15
E IW+W Y + ++ + +IRF+V S+ YPPIP E K+++ F+PM
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGL-----DEIRFQVQSVSYPPIPVEQPKESKPFAPM 175
Query: 14 EI 9
I
Sbjct: 176 MI 177
>ref|XP_003629059.1| DNA-directed RNA polymerase III subunit RPC8 [Medicago truncatula]
Length = 220
Score = 198 bits (503), Expect = 3e-48
Identities = 99/184 (53%), Positives = 129/184 (70%), Gaps = 5/184 (2%)
Frame = -2
Query: 545 GIRPMFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVED 366
G+ PMF LSKIEHK LPPHLL+ P+ EA++ ELERLFLDKVI LGLCISVYDI +E
Sbjct: 24 GLGPMFYLSKIEHKFALPPHLLARPIREAIQSELERLFLDKVIQKLGLCISVYDITSIEG 83
Query: 365 GFIVPGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPS 186
G I PG GAPTY+V+F L+MFRPF GEI+ K+ DG+RL+LGFF DI++P H +P
Sbjct: 84 GSIFPGAGAPTYQVVFNLIMFRPFPGEIISAKVMSLDADGVRLSLGFFEDIYIPTHHMPY 143
Query: 185 P----NRIENGIWVWLYGSSEEGVNEMFLDL-NQQIRFRVLSIKYPPIPNEPKKDAERFS 21
P ++ W W YG E +E +++ N+ IRF+VLS+ YP IP E K+++ F+
Sbjct: 144 PSYYISKNNTRKWTWEYG---EETDEFNIEISNEVIRFQVLSVSYPTIPVEQAKESKPFA 200
Query: 20 PMEI 9
PM +
Sbjct: 201 PMVV 204
>ref|XP_010087136.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
gi|587835807|gb|EXB26576.1| DNA-directed RNA polymerase
III subunit rpc8 [Morus notabilis]
Length = 200
Score = 197 bits (501), Expect = 5e-48
Identities = 97/183 (53%), Positives = 129/183 (70%), Gaps = 7/183 (3%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS+IEH + +PP +LS PL EA+K ELE+LFLDKVI NLGLCISVYDI+ +E GFI
Sbjct: 1 MFYLSRIEHTLRVPPDILSRPLTEAIKVELEKLFLDKVIANLGLCISVYDIISIEGGFIF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIPSPNRI 174
PG+GA TY +F ++MFRPFVGEI+ K+++S +GLRLTLGFF DI++P + +P P+R
Sbjct: 61 PGDGAATYTAVFTMIMFRPFVGEIISAKVKESDANGLRLTLGFFEDIYIPANFLPDPSRP 120
Query: 173 E-------NGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPM 15
E W+W E G + +D +IRF+V S+ YPPIP E K+++ F+PM
Sbjct: 121 EPDPRKRDRVTWIW-----EFGEQKYVIDGEDEIRFQVHSVNYPPIPVEQPKESKPFAPM 175
Query: 14 EIT 6
IT
Sbjct: 176 VIT 178
>ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Brachypodium distachyon]
gi|721612194|ref|XP_010238479.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like [Brachypodium
distachyon] gi|721612200|ref|XP_010238484.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC8-like
[Brachypodium distachyon]
Length = 200
Score = 197 bits (501), Expect = 5e-48
Identities = 103/176 (58%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Frame = -2
Query: 533 MFSLSKIEHKMILPPHLLSLPLVEALKGELERLFLDKVIPNLGLCISVYDILKVEDGFIV 354
MF LS+IEH + +PPHLLS PLV+A+K ELERLFLDKVI NLGLC+SVYDIL VE GFI
Sbjct: 1 MFVLSQIEHNLPMPPHLLSRPLVDAIKTELERLFLDKVITNLGLCVSVYDILAVEGGFIF 60
Query: 353 PGEGAPTYEVIFRLVMFRPFVGEILDGKIEKSGPDGLRLTLGFFSDIHVPVHLIP-SPNR 177
PGEG TY+V FRL+MFRPF+GE+L GKI GL+++L FFSDI +P HL+ R
Sbjct: 61 PGEGCSTYKVSFRLLMFRPFIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQYGTVR 120
Query: 176 IENGIWVWLYGSSEEGVNEMFLDLNQQIRFRVLSIKYPPIPNEPKKDAERFSPMEI 9
E+G W+ +++G +E++LD++ +IRF V IKYPPIP E K+D + F+PM+I
Sbjct: 121 GEDGRWML---KTDDG-DELYLDIDDEIRFLVSGIKYPPIPVEQKEDDKPFAPMQI 172