BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00011095
         (2694 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1343   0.0  
ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1332   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1332   0.0  
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1300   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1283   0.0  
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1281   0.0  
ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1269   0.0  
ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1269   0.0  
ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1269   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1262   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...  1243   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1239   0.0  
ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1238   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]        1237   0.0  
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1236   0.0  
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...  1234   0.0  
ref|NP_001289502.1| DNA-directed RNA polymerase 1, mitochondrial...  1234   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1233   0.0  
ref|XP_012491228.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1233   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...  1233   0.0  

>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1343 bits (3476), Expect = 0.0
 Identities = 669/844 (79%), Positives = 730/844 (86%), Gaps = 17/844 (2%)
 Frame = -1

Query: 2481 ELKNGVKCGFSAMGSRRNGELSTSG--------GCFGTLFEFSGLRNRVMGFASVAEAVS 2326
            ELK+ +   FS     RNGEL +          GCF        L N   G+ASVAEAV 
Sbjct: 85   ELKSSMSFRFSERSFLRNGELPSKEDELGRPILGCFRNPISPPRLSNHPKGYASVAEAVC 144

Query: 2325 STDAEDEVSVVEEMQGLLQKISNGEQ-----RGQRLERATGG----KYLALRRRQVKVET 2173
            S DAE+++S ++E+Q LL+++   E+     R Q+  +  GG    KYL LRRRQVK+ET
Sbjct: 145  SMDAEEDLSAIDEIQELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRRRQVKIET 204

Query: 2172 EAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAY 1993
            EAW+QAAKEY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLRDCI  +QE CR+GK + AY
Sbjct: 205  EAWEQAAKEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAY 264

Query: 1992 APYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXX 1813
            APYFDQLP EMM+VITMHKLM LLMTGG HGS RVVQAA  +GEAIE+EVRIHKFL    
Sbjct: 265  APYFDQLPAEMMSVITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEKTR 324

Query: 1812 XXXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAK 1633
                     +G E D V KEQ+ LRK+VT+L+KKQK++ VR IVK QDDSKPWGQ+AQAK
Sbjct: 325  KKTDKDKKADGGESDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPWGQDAQAK 384

Query: 1632 VGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLV 1453
            VGSRLIE+L+ TAYIQPPVDQLADGPPDIRPAFRH LKTVTKE +KTSRRYGVIECDPLV
Sbjct: 385  VGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLV 444

Query: 1452 RKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQ 1273
            RKGL+RTARHMVIPYMPMLVPP+NWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPR+Q
Sbjct: 445  RKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQ 504

Query: 1272 LQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELR 1093
            L+PVFEALDTLGN  WRVNKR+L VVDRIWASGGRLADLVDRED+ +PE+PDTEDEAE++
Sbjct: 505  LEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIK 564

Query: 1092 KWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNH 913
            KWKW+++  KKENSERHSQRCDIELKLAVAR+MKDEDGFFYPHNLDFRGRAYPMHP+LNH
Sbjct: 565  KWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNH 624

Query: 912  LGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDS 733
            LGSDLCRGILEFAEGRPLGK GL+WLKI LANLYAGGVDKLSY+GRIAFTENHL+DIFDS
Sbjct: 625  LGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDS 684

Query: 732  ADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAAL 553
            ADRPLEGRRWWL AEDPFQCLA CINLSEALR SSPETTISH+PVH DGSCNGLQHYAAL
Sbjct: 685  ADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAAL 744

Query: 552  GRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRK 373
            GRDKLGA AVNLVAGEKPADVYS IAARVLDIM+RDA+KDP + P A  AR+LINQVDRK
Sbjct: 745  GRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRK 804

Query: 372  LVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAA 193
            LVKQTVMTSVYGVTYIGARDQIKRRLKER  I DD ELF ASCYAAKTTLTALGEMF+AA
Sbjct: 805  LVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTALGEMFEAA 864

Query: 192  RSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVM 13
            RSIMSWLGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVM
Sbjct: 865  RSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVM 924

Query: 12   VKRQ 1
            VKRQ
Sbjct: 925  VKRQ 928


>ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X2 [Nelumbo
            nucifera]
          Length = 942

 Score = 1332 bits (3448), Expect = 0.0
 Identities = 662/843 (78%), Positives = 730/843 (86%), Gaps = 16/843 (1%)
 Frame = -1

Query: 2481 ELKNGVKCGFSAMGSRRNGELST--------SGGCFGTLFEFSGLRNRVMGFASVAEAVS 2326
            E K+ +  GFS     RNGE  +        S GCF      S   N   G+ASVAE +S
Sbjct: 45   EFKSSINAGFSESCFLRNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLS 104

Query: 2325 STDAEDEVSVVEEMQGLLQKISNGE-------QRGQRLERATG-GKYLALRRRQVKVETE 2170
            STDAE++VSVV+E+Q LL+++S  E       Q+  +L    G GKYL LRRRQVK+ETE
Sbjct: 105  STDAEEDVSVVDEIQELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETE 164

Query: 2169 AWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYA 1990
            AW+QAAKEY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLRDCIA +QE CR+GK +AAYA
Sbjct: 165  AWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYA 224

Query: 1989 PYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXX 1810
            PYFDQLP EMM+VITMHKL+ LLMTGG HGSARVVQAA  +G+AIE+EVRI+KFL     
Sbjct: 225  PYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKK 284

Query: 1809 XXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKV 1630
                    EG E D   KEQ+ LRK+VT+L+KKQK++ VR IVK QDDSKPWGQ+AQAKV
Sbjct: 285  KTDKDKKAEGGESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKV 344

Query: 1629 GSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVR 1450
            GS LIE+L+ TAYIQ P DQLADGPPDIRPAFRH LKT+TKE +KTSRRYG+IECDPLVR
Sbjct: 345  GSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVR 404

Query: 1449 KGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQL 1270
            KGL+RTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKR  R+QL
Sbjct: 405  KGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQL 464

Query: 1269 QPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRK 1090
            +P+FEALDTLGN  WR+NKR+LGVVDRIWASGGRLADLVDRED+ LPE+P+TEDEAEL+K
Sbjct: 465  EPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKK 524

Query: 1089 WKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHL 910
            WKW+++ VKKENSERHSQRCD ELKLAVAR+MKDE+GFFYPHNLDFRGRAYPMHP+LNHL
Sbjct: 525  WKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHL 584

Query: 909  GSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSA 730
            GSDLCRGILEFAEGRPLGK GLRWLKI LANLYAGGVDKLSY+GRIAFTENHL+DIFDSA
Sbjct: 585  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSA 644

Query: 729  DRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALG 550
            DRPLEGRRWWL A+DPFQCLAVCINLSEALR  SPET ISH+P+H DGSCNGLQHYAALG
Sbjct: 645  DRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALG 704

Query: 549  RDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKL 370
            RDKLGA AVNLVAG+KPADVYS +AARVLDIM+RDAQKDP ++P A  ARLLINQVDRKL
Sbjct: 705  RDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKL 764

Query: 369  VKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAAR 190
            VKQTVMTSVYGVTYIGARDQIKRRLKER  I D+ ELF ASCYAAKTT+TALGEMF+AAR
Sbjct: 765  VKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAAR 824

Query: 189  SIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 10
            SIMSWLGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV
Sbjct: 825  SIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 884

Query: 9    KRQ 1
            KRQ
Sbjct: 885  KRQ 887


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1332 bits (3448), Expect = 0.0
 Identities = 662/843 (78%), Positives = 730/843 (86%), Gaps = 16/843 (1%)
 Frame = -1

Query: 2481 ELKNGVKCGFSAMGSRRNGELST--------SGGCFGTLFEFSGLRNRVMGFASVAEAVS 2326
            E K+ +  GFS     RNGE  +        S GCF      S   N   G+ASVAE +S
Sbjct: 45   EFKSSINAGFSESCFLRNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLS 104

Query: 2325 STDAEDEVSVVEEMQGLLQKISNGE-------QRGQRLERATG-GKYLALRRRQVKVETE 2170
            STDAE++VSVV+E+Q LL+++S  E       Q+  +L    G GKYL LRRRQVK+ETE
Sbjct: 105  STDAEEDVSVVDEIQELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETE 164

Query: 2169 AWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYA 1990
            AW+QAAKEY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLRDCIA +QE CR+GK +AAYA
Sbjct: 165  AWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYA 224

Query: 1989 PYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXX 1810
            PYFDQLP EMM+VITMHKL+ LLMTGG HGSARVVQAA  +G+AIE+EVRI+KFL     
Sbjct: 225  PYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKK 284

Query: 1809 XXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKV 1630
                    EG E D   KEQ+ LRK+VT+L+KKQK++ VR IVK QDDSKPWGQ+AQAKV
Sbjct: 285  KTDKDKKAEGGESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKV 344

Query: 1629 GSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVR 1450
            GS LIE+L+ TAYIQ P DQLADGPPDIRPAFRH LKT+TKE +KTSRRYG+IECDPLVR
Sbjct: 345  GSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVR 404

Query: 1449 KGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQL 1270
            KGL+RTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKR  R+QL
Sbjct: 405  KGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQL 464

Query: 1269 QPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRK 1090
            +P+FEALDTLGN  WR+NKR+LGVVDRIWASGGRLADLVDRED+ LPE+P+TEDEAEL+K
Sbjct: 465  EPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKK 524

Query: 1089 WKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHL 910
            WKW+++ VKKENSERHSQRCD ELKLAVAR+MKDE+GFFYPHNLDFRGRAYPMHP+LNHL
Sbjct: 525  WKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHL 584

Query: 909  GSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSA 730
            GSDLCRGILEFAEGRPLGK GLRWLKI LANLYAGGVDKLSY+GRIAFTENHL+DIFDSA
Sbjct: 585  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSA 644

Query: 729  DRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALG 550
            DRPLEGRRWWL A+DPFQCLAVCINLSEALR  SPET ISH+P+H DGSCNGLQHYAALG
Sbjct: 645  DRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALG 704

Query: 549  RDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKL 370
            RDKLGA AVNLVAG+KPADVYS +AARVLDIM+RDAQKDP ++P A  ARLLINQVDRKL
Sbjct: 705  RDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKL 764

Query: 369  VKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAAR 190
            VKQTVMTSVYGVTYIGARDQIKRRLKER  I D+ ELF ASCYAAKTT+TALGEMF+AAR
Sbjct: 765  VKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAAR 824

Query: 189  SIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 10
            SIMSWLGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV
Sbjct: 825  SIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 884

Query: 9    KRQ 1
            KRQ
Sbjct: 885  KRQ 887


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Phoenix dactylifera]
          Length = 1038

 Score = 1300 bits (3365), Expect = 0.0
 Identities = 647/838 (77%), Positives = 721/838 (86%), Gaps = 21/838 (2%)
 Frame = -1

Query: 2451 SAMGSRRNGELSTSGGCFG-TLFEFSGLRNRVMGFASVAEAVSSTDAEDEVSVVEEMQGL 2275
            S  G   NG+ S    C   ++   SG       FASVAEAVSSTD +++ S +EE+QG+
Sbjct: 98   SNTGVGHNGDSSPFIRCPNFSIGRISGRLGDSRFFASVAEAVSSTDVDEDTSSIEEIQGM 157

Query: 2274 LQKISN-----GEQRGQRLERAT---------------GGKYLALRRRQVKVETEAWDQA 2155
            L+++S      G + G  LE                   GKY  LRRRQ+++ETEAW+QA
Sbjct: 158  LEEMSKIDVREGSKIGGNLEEVRPKQQLGQPRMVCGMGSGKYAILRRRQIRIETEAWEQA 217

Query: 2154 AKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYAPYFDQ 1975
            AKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA +QEQCR+ + + ++ PYF Q
Sbjct: 218  AKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEQCRDPRTRVSHGPYFYQ 277

Query: 1974 LPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXXXXXXX 1795
            LP +MMAVITMHKLM+LLMTG   G  RVVQAA  +GEAIEHEVRIH+FL          
Sbjct: 278  LPADMMAVITMHKLMSLLMTGNGDGGIRVVQAACQIGEAIEHEVRIHRFLEKTRKKTDKD 337

Query: 1794 XXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKVGSRLI 1615
               E VE  +++KEQE LRK+VTNL+KKQKV  VR IVK QDDSKPWGQ+AQAKVGSRLI
Sbjct: 338  KKNEDVEGATLTKEQEFLRKKVTNLMKKQKVHQVRKIVKGQDDSKPWGQDAQAKVGSRLI 397

Query: 1614 EMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVRKGLDR 1435
            E+L++TAYIQPPV Q ADGPPDIRPAFRH L+TVTKEQ+K SRRYGVIECDPLVR+GLDR
Sbjct: 398  ELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHSRRYGVIECDPLVRQGLDR 457

Query: 1434 TARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQLQPVFE 1255
            TARHMVIPYMPMLVPP+NWTGY+KG +LFLPSY+MRTHGARQQREAV+RAPR+++Q VFE
Sbjct: 458  TARHMVIPYMPMLVPPVNWTGYEKGGHLFLPSYIMRTHGARQQREAVRRAPRKEMQAVFE 517

Query: 1254 ALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRKWKWQL 1075
            ALDTLG+  WRVNKR+L VVDRIW+SGGRLADLVDR+DI LPEKPDTED AE+RKWKW++
Sbjct: 518  ALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLVDRDDIPLPEKPDTEDGAEIRKWKWKV 577

Query: 1074 RGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLC 895
            + VKKENSE+HSQRCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSDLC
Sbjct: 578  KSVKKENSEKHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 637

Query: 894  RGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLE 715
            RGILEFAEGRPLGK GLRWLKI LANLYAGGVDKLSYDGR+AFTENHL+DIFDSADRPLE
Sbjct: 638  RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRVAFTENHLDDIFDSADRPLE 697

Query: 714  GRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALGRDKLG 535
            GRRWWLGAEDPFQCLAVCINLSEALR SSPETTISH+PVH DGSCNGLQHYAALGRDKLG
Sbjct: 698  GRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 757

Query: 534  ATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKLVKQTV 355
            A AVNLVAG+KPADVYSEIAARVL+IM+RDAQKDPA+DP A RARLL+NQVDRKLVKQTV
Sbjct: 758  AIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPATDPDALRARLLVNQVDRKLVKQTV 817

Query: 354  MTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAARSIMSW 175
            MTSVYGVTY+GAR+QIKRRLKERG I DD ELF+ASCYAAKTTLTALGEMFQAARSIMSW
Sbjct: 818  MTSVYGVTYVGAREQIKRRLKERGVISDDTELFSASCYAAKTTLTALGEMFQAARSIMSW 877

Query: 174  LGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 1
            LGDCAK+IASENQPVRWTTPLGLPVVQPYR LGRHLIKTSLQVLTLQRETDKVMVKRQ
Sbjct: 878  LGDCAKIIASENQPVRWTTPLGLPVVQPYRALGRHLIKTSLQVLTLQRETDKVMVKRQ 935


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1283 bits (3319), Expect = 0.0
 Identities = 638/817 (78%), Positives = 716/817 (87%), Gaps = 4/817 (0%)
 Frame = -1

Query: 2439 SRRNGELSTSG-GCFGTLFEFSGLRNRVMGFASVAEAVSSTDAEDEVSVVEEMQGLLQKI 2263
            S +  EL   G G   T   F GL     G+AS AEA++S   E+++S V+E+Q L++++
Sbjct: 63   SFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIAS---EEDMSGVDEVQELVEEV 119

Query: 2262 SNGEQRGQRLERATG---GKYLALRRRQVKVETEAWDQAAKEYQELLADMCEQKLAPNLP 2092
            + G++  ++ +   G   GK+  LRRRQ+K+ETEAW++AAKEY+ELL+DMCEQKLAPNLP
Sbjct: 120  NKGDKLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLP 179

Query: 2091 YMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYAPYFDQLPPEMMAVITMHKLMALLMTG 1912
            Y+KSLFLGWFEPLRD IA +Q+ C++GK +AAYAPYFD LP +MMAVITMHKLM LLMTG
Sbjct: 180  YIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTG 239

Query: 1911 GVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXXXXXXXXXXEGVEPDSVSKEQEHLRKR 1732
              +GSARVVQAA ++GEAIEHEVRI +F+             +G   + V+KEQE LRK+
Sbjct: 240  EGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGS-NPVTKEQEKLRKK 298

Query: 1731 VTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPP 1552
            V+ L+KKQK++ VR IVKRQDDSKPWGQ+A  KVGSRLIE+LI+TAYIQPP DQL DGPP
Sbjct: 299  VSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPP 358

Query: 1551 DIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTG 1372
            DIRPAF H LKTV KE +K +RRYGVIECDPLVRKGL++TARHMVIPYMPMLVPPLNWTG
Sbjct: 359  DIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTG 418

Query: 1371 YDKGAYLFLPSYVMRTHGARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVD 1192
            YDKGAYLFLPSYVMR HGARQQREA+KRAPR+ L+P FEAL+TLGN  WR+NKR+LGV+D
Sbjct: 419  YDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVID 478

Query: 1191 RIWASGGRLADLVDREDIVLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKL 1012
            RIWASGGRLADLVDRED+ LPE+PDTEDEAE+RKWKW++R VKKENSERHSQRCDIELKL
Sbjct: 479  RIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKL 538

Query: 1011 AVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKLGLRWLK 832
            AVARKMKDEDGFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGK GLRWLK
Sbjct: 539  AVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 598

Query: 831  IQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINL 652
            I LAN+YAGGVDKLSY+GR+AFTENHLEDIFDSADRPLEGRRWWL AEDPFQCLA CINL
Sbjct: 599  IHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINL 658

Query: 651  SEALRRSSPETTISHLPVHMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAA 472
            SEALR SSPETTISH+PVH DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVYS IAA
Sbjct: 659  SEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 718

Query: 471  RVLDIMQRDAQKDPASDPVAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 292
            RVLDIMQRDAQKDPA++P A RARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK
Sbjct: 719  RVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 778

Query: 291  ERGFIEDDKELFAASCYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPL 112
            ER  I D+ E+F+ASCYAAKTTLTALGEMF+AARSIMSWLGDCAKVIASEN PVRW TPL
Sbjct: 779  ERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPL 838

Query: 111  GLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 1
            GLPVVQPYRKLGRHLIKTSLQVL+LQRETDKVMVKRQ
Sbjct: 839  GLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQ 875


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score = 1281 bits (3315), Expect = 0.0
 Identities = 638/838 (76%), Positives = 713/838 (85%), Gaps = 21/838 (2%)
 Frame = -1

Query: 2451 SAMGSRRNGELSTS-GGCFGTLFEFSGLRNRVMGFASVAEAVSSTDAEDEVSVVEEMQGL 2275
            S MG   NG+L         +++  SG       FASVAEAV+STD +++ S +EE+QG+
Sbjct: 98   SNMGFCHNGDLLPFIRRSNSSIWRISGHLGDSRFFASVAEAVASTDVDEDASSIEEIQGM 157

Query: 2274 LQKISN-----GEQRGQRLERAT---------------GGKYLALRRRQVKVETEAWDQA 2155
            L+++S      G + G  LE                   GKY  LRRRQ+++ETEAW+QA
Sbjct: 158  LEEMSKIDAREGSKIGGNLEEVRPKVPLEKPRMVPGMGSGKYAILRRRQIRIETEAWEQA 217

Query: 2154 AKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYAPYFDQ 1975
            AKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA +QE+C +   + +Y  YF+Q
Sbjct: 218  AKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEKCGDPGNRLSYGRYFNQ 277

Query: 1974 LPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXXXXXXX 1795
            LP +MMAVITMHKLM+LLMTG  +G  RVVQAA  +GEAIEHEVRIH+FL          
Sbjct: 278  LPADMMAVITMHKLMSLLMTGSGYGGIRVVQAACQIGEAIEHEVRIHRFLEKTRKKADKD 337

Query: 1794 XXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKVGSRLI 1615
               E VE  +++KEQE LRK+VTNL+KKQK+R VR IV+ QDDSKPWGQ+ QAKVGSRLI
Sbjct: 338  KKNEDVEGATLAKEQEFLRKKVTNLMKKQKLRQVRKIVRGQDDSKPWGQDFQAKVGSRLI 397

Query: 1614 EMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVRKGLDR 1435
            E+L++TAYIQPPV Q ADGPPDIRPAFRH L+TVTKEQ+K SRRYGVIECDPLVR+GLDR
Sbjct: 398  ELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHSRRYGVIECDPLVRQGLDR 457

Query: 1434 TARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQLQPVFE 1255
            TARHMVIPYMPMLVPP++WTGYDKG +LFLPSY+MR HGARQQREAVKRAPR Q+Q VFE
Sbjct: 458  TARHMVIPYMPMLVPPVHWTGYDKGGHLFLPSYIMRIHGARQQREAVKRAPRMQMQAVFE 517

Query: 1254 ALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRKWKWQL 1075
            ALDTLG   WR+NKR+L VVDR+W+ GGRLADLVDR+DI LPEKPDTEDEA +RKWKW++
Sbjct: 518  ALDTLGTTKWRINKRVLSVVDRMWSGGGRLADLVDRDDIPLPEKPDTEDEATIRKWKWKV 577

Query: 1074 RGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLC 895
            + VKKENSERHSQRCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSDLC
Sbjct: 578  KSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 637

Query: 894  RGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLE 715
            RGILEFAEGRPLGK GLRWLKI LANLYAGGVDKLSYDGR+AFTENHL++IFDSADRPLE
Sbjct: 638  RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRVAFTENHLDEIFDSADRPLE 697

Query: 714  GRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALGRDKLG 535
            GRRWWLGAEDPFQCLAVCINLSEALR SSPETTISH+PVH DGSCNGLQHYAALGRDKLG
Sbjct: 698  GRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 757

Query: 534  ATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKLVKQTV 355
            A AVNLVAG+KPADVYSEIAARVL+IM+RDAQKDPA DP A RARLL+NQVDRKLVKQTV
Sbjct: 758  AIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPAIDPNALRARLLVNQVDRKLVKQTV 817

Query: 354  MTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAARSIMSW 175
            MTSVYGVTY+GAR+QIKRRLKERG I DD ELF ASCYAAKTTLTALGEMFQAARSIM W
Sbjct: 818  MTSVYGVTYVGAREQIKRRLKERGVISDDTELFGASCYAAKTTLTALGEMFQAARSIMGW 877

Query: 174  LGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 1
            LGDCAK+IASEN PVRWTTPLGLPVVQPYR LGRHLIKTSLQVLTLQRETDKVMVKRQ
Sbjct: 878  LGDCAKIIASENHPVRWTTPLGLPVVQPYRALGRHLIKTSLQVLTLQRETDKVMVKRQ 935


>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
            dactylifera]
          Length = 1036

 Score = 1269 bits (3285), Expect = 0.0
 Identities = 629/848 (74%), Positives = 719/848 (84%), Gaps = 21/848 (2%)
 Frame = -1

Query: 2481 ELKNGVKCGFSAMGSRRNGELSTSGGCFG-TLFEFSGLRNRVMGFASVAEAVSSTDAEDE 2305
            +L+  +   F  +GS RNGEL  S G    ++ + SG      G+A+VAEAV STD ++E
Sbjct: 86   DLRPPLSSRFCDIGSHRNGELWPSVGYSNCSIGKLSGFLANSKGYANVAEAVVSTDLDEE 145

Query: 2304 VSVVEEMQGLLQKISNGE--------------------QRGQRLERATGGKYLALRRRQV 2185
             S +EE+Q LL+++S  E                    +  +++      KY  LR+RQ+
Sbjct: 146  ASSIEEIQSLLEEMSRVEVAEDWKVSDRSQEFPQKAQLEEPKKVSGMGAKKYAKLRQRQI 205

Query: 2184 KVETEAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKC 2005
            K+ETEAW+QAAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEP RD IA +QE+CR+ + 
Sbjct: 206  KIETEAWEQAAKEYKELLQDMCEQKLAPNLPYVKSLFLGWFEPFRDKIAAEQEKCRDVRN 265

Query: 2004 KAAYAPYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFL 1825
            +AAY PY  QLP +MMAVITMHKLM+LLMTGG +GS  VVQAA  VG AIE EV+IH+FL
Sbjct: 266  RAAYGPYIGQLPADMMAVITMHKLMSLLMTGGSNGSVLVVQAACQVGSAIEQEVKIHRFL 325

Query: 1824 XXXXXXXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQE 1645
                            E D+++KEQE LRK+VTNL+KKQK++ VR IVK QDDSKPWGQ+
Sbjct: 326  EKSKQKTNINKKSGVAEVDNITKEQELLRKKVTNLMKKQKLQQVRKIVKGQDDSKPWGQD 385

Query: 1644 AQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIEC 1465
            ++AKVGSRLIE+L++TAYIQPPV+QLAD PPDIRPAFRH L+ V  EQ+K SRRYG IEC
Sbjct: 386  SRAKVGSRLIELLVETAYIQPPVNQLADSPPDIRPAFRHLLRNVQNEQKKISRRYGFIEC 445

Query: 1464 DPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRA 1285
            DPLVR+GLDRTARHMVIPYMPMLVPP++W GYDKGA+LFLPSY+MRTHG+RQQREAVKRA
Sbjct: 446  DPLVRQGLDRTARHMVIPYMPMLVPPISWKGYDKGAHLFLPSYLMRTHGSRQQREAVKRA 505

Query: 1284 PREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDE 1105
            PR+QLQ VFEALDTLGN  WRVNKR+L +VDR+W+SGGRLA+LVDR+DI LPEKP+TED 
Sbjct: 506  PRKQLQLVFEALDTLGNTKWRVNKRVLSIVDRMWSSGGRLANLVDRDDIPLPEKPETEDG 565

Query: 1104 AELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHP 925
            AE+RKWKW+L+ VKKENSERHSQRCD+E+KLAVARKMKDE+GF+YPHNLDFRGRAYPMHP
Sbjct: 566  AEIRKWKWKLKSVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP 625

Query: 924  HLNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLED 745
            +LNHLGSDLCRGILEFAEGRPLGK GLRWLKI LANLYAGGVDKLSYDGRIAFTENHL+D
Sbjct: 626  YLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDD 685

Query: 744  IFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQH 565
            IFDSADRPLEGRRWWLGAEDPFQCLAVCINL+EALR SSPE+TISH+PVH DGSCNGLQH
Sbjct: 686  IFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGSCNGLQH 745

Query: 564  YAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQ 385
            YAALGRDKLGA +VNLVAGEKPADVYS IAARV +IMQ+DA+KDPA++P A  ARLLI+Q
Sbjct: 746  YAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAEKDPATEPNALHARLLIDQ 805

Query: 384  VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEM 205
            VDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD ELF ASCYAAKTTLTALGEM
Sbjct: 806  VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLELFRASCYAAKTTLTALGEM 865

Query: 204  FQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRET 25
            FQAARSIMSWLGDCAKVIASEN  VRWTTPLGLPVVQPYRKLGRH+IKTSLQVL+LQRET
Sbjct: 866  FQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVLSLQRET 925

Query: 24   DKVMVKRQ 1
            DK+MVKRQ
Sbjct: 926  DKIMVKRQ 933


>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Elaeis
            guineensis]
          Length = 1036

 Score = 1269 bits (3284), Expect = 0.0
 Identities = 639/859 (74%), Positives = 714/859 (83%), Gaps = 21/859 (2%)
 Frame = -1

Query: 2514 FAWYSNWRSDSELKNGVKCGFSAMGSRRNGELSTSGGCFGT-LFEFSGLRNRVMGFASVA 2338
            F W  N   D  L+      F  +G   NGEL  S G     + + SG      GFA VA
Sbjct: 77   FLWEKNRILD--LRPPFNSRFCDIGPHHNGELWPSVGYSNCPIGKLSGFLANSRGFADVA 134

Query: 2337 EAVSSTDAEDEVSVVEEMQGLLQKISNGE---------------QRGQRLE--RATG--- 2218
            EAV+STD ++E S +EE+Q LL++ S  E               Q+ QR E  + +G   
Sbjct: 135  EAVASTDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQKAQREEPKKVSGMGA 194

Query: 2217 GKYLALRRRQVKVETEAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIA 2038
             KY  LR+RQ+K+ETEAW+QAAKEY+ELL DMCEQKLAPNLPY+KSL LGWFEP RD IA
Sbjct: 195  KKYAKLRQRQIKIETEAWEQAAKEYKELLQDMCEQKLAPNLPYVKSLLLGWFEPFRDKIA 254

Query: 2037 KDQEQCREGKCKAAYAPYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEA 1858
             +QE+CRE + +AAY PY  QLP +MMAVITMHKLM+LLMT G +GS  VVQAA  VG A
Sbjct: 255  AEQEKCREVRNRAAYGPYIGQLPADMMAVITMHKLMSLLMTSGSNGSVLVVQAACQVGSA 314

Query: 1857 IEHEVRIHKFLXXXXXXXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVK 1678
            IE EV+IH+FL                E D+++KEQE LRKRVTNL+KKQK++ VR IVK
Sbjct: 315  IEQEVKIHRFLEKSKKKTNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQVRKIVK 374

Query: 1677 RQDDSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQR 1498
             QDDSKPWGQ+ QAKVGSRLIE+L++TAYIQPP++QLAD PPDIRPAFRHYL+ V KEQ+
Sbjct: 375  GQDDSKPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQK 434

Query: 1497 KTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHG 1318
            K SRRYG IECDPLVR+GLDRTARHMVIPYMPMLVPP++W  YDKGA+LFLPSYVMRTHG
Sbjct: 435  KISRRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHG 494

Query: 1317 ARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDI 1138
            +RQQR AVKRAPREQ+Q VFEALDTLGN  WRVNKR+L +VDRIW+SGGRLA+LVDR+D 
Sbjct: 495  SRQQRAAVKRAPREQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDN 554

Query: 1137 VLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNL 958
             LPEKP+TED AE+RKWKW+L+ VKKENSERHSQRCD+E+KLAVARKMKDE+GF+YPHNL
Sbjct: 555  PLPEKPETEDGAEIRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNL 614

Query: 957  DFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDG 778
            DFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGK GL WLKI LANLYAGGVDKLSYDG
Sbjct: 615  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDG 674

Query: 777  RIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPV 598
            RIAFTENHL+DIFDSADRPLEGRRWWLGAEDPFQCLAVCINL+EALR SSPE+TISH+PV
Sbjct: 675  RIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPV 734

Query: 597  HMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDP 418
            H DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYS IAARV +IMQ+DAQKDPA DP
Sbjct: 735  HQDGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDP 794

Query: 417  VAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYA 238
             A  ARLLINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD E F ASCYA
Sbjct: 795  NASHARLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYA 854

Query: 237  AKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKT 58
            AKTTLTALGEMFQAARSIM WLGDCAKVIASENQ VRWTTPLGLPVVQPYRKLGRH+IKT
Sbjct: 855  AKTTLTALGEMFQAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKT 914

Query: 57   SLQVLTLQRETDKVMVKRQ 1
            SLQVL+LQRETDK+MVKRQ
Sbjct: 915  SLQVLSLQRETDKIMVKRQ 933


>ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Elaeis
            guineensis]
          Length = 1042

 Score = 1269 bits (3284), Expect = 0.0
 Identities = 639/859 (74%), Positives = 714/859 (83%), Gaps = 21/859 (2%)
 Frame = -1

Query: 2514 FAWYSNWRSDSELKNGVKCGFSAMGSRRNGELSTSGGCFGT-LFEFSGLRNRVMGFASVA 2338
            F W  N   D  L+      F  +G   NGEL  S G     + + SG      GFA VA
Sbjct: 77   FLWEKNRILD--LRPPFNSRFCDIGPHHNGELWPSVGYSNCPIGKLSGFLANSRGFADVA 134

Query: 2337 EAVSSTDAEDEVSVVEEMQGLLQKISNGE---------------QRGQRLE--RATG--- 2218
            EAV+STD ++E S +EE+Q LL++ S  E               Q+ QR E  + +G   
Sbjct: 135  EAVASTDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQKAQREEPKKVSGMGA 194

Query: 2217 GKYLALRRRQVKVETEAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIA 2038
             KY  LR+RQ+K+ETEAW+QAAKEY+ELL DMCEQKLAPNLPY+KSL LGWFEP RD IA
Sbjct: 195  KKYAKLRQRQIKIETEAWEQAAKEYKELLQDMCEQKLAPNLPYVKSLLLGWFEPFRDKIA 254

Query: 2037 KDQEQCREGKCKAAYAPYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEA 1858
             +QE+CRE + +AAY PY  QLP +MMAVITMHKLM+LLMT G +GS  VVQAA  VG A
Sbjct: 255  AEQEKCREVRNRAAYGPYIGQLPADMMAVITMHKLMSLLMTSGSNGSVLVVQAACQVGSA 314

Query: 1857 IEHEVRIHKFLXXXXXXXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVK 1678
            IE EV+IH+FL                E D+++KEQE LRKRVTNL+KKQK++ VR IVK
Sbjct: 315  IEQEVKIHRFLEKSKKKTNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQVRKIVK 374

Query: 1677 RQDDSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQR 1498
             QDDSKPWGQ+ QAKVGSRLIE+L++TAYIQPP++QLAD PPDIRPAFRHYL+ V KEQ+
Sbjct: 375  GQDDSKPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQK 434

Query: 1497 KTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHG 1318
            K SRRYG IECDPLVR+GLDRTARHMVIPYMPMLVPP++W  YDKGA+LFLPSYVMRTHG
Sbjct: 435  KISRRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHG 494

Query: 1317 ARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDI 1138
            +RQQR AVKRAPREQ+Q VFEALDTLGN  WRVNKR+L +VDRIW+SGGRLA+LVDR+D 
Sbjct: 495  SRQQRAAVKRAPREQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDN 554

Query: 1137 VLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNL 958
             LPEKP+TED AE+RKWKW+L+ VKKENSERHSQRCD+E+KLAVARKMKDE+GF+YPHNL
Sbjct: 555  PLPEKPETEDGAEIRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNL 614

Query: 957  DFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDG 778
            DFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGK GL WLKI LANLYAGGVDKLSYDG
Sbjct: 615  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDG 674

Query: 777  RIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPV 598
            RIAFTENHL+DIFDSADRPLEGRRWWLGAEDPFQCLAVCINL+EALR SSPE+TISH+PV
Sbjct: 675  RIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPV 734

Query: 597  HMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDP 418
            H DGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYS IAARV +IMQ+DAQKDPA DP
Sbjct: 735  HQDGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDP 794

Query: 417  VAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYA 238
             A  ARLLINQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKERG I DD E F ASCYA
Sbjct: 795  NASHARLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYA 854

Query: 237  AKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKT 58
            AKTTLTALGEMFQAARSIM WLGDCAKVIASENQ VRWTTPLGLPVVQPYRKLGRH+IKT
Sbjct: 855  AKTTLTALGEMFQAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKT 914

Query: 57   SLQVLTLQRETDKVMVKRQ 1
            SLQVL+LQRETDK+MVKRQ
Sbjct: 915  SLQVLSLQRETDKIMVKRQ 933


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|731418092|ref|XP_010660553.1|
            PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|298204431|emb|CBI16911.3| unnamed protein product
            [Vitis vinifera]
          Length = 1035

 Score = 1262 bits (3265), Expect = 0.0
 Identities = 642/838 (76%), Positives = 704/838 (84%), Gaps = 19/838 (2%)
 Frame = -1

Query: 2457 GFSAMGSRRNGELST--------SGGCFGTLFEFSGLRNRVMGFASVAEAVSSTDAEDEV 2302
            GFS MG RR GE+S+        S GC      FSG   +   +ASVAEAVSSTD E++V
Sbjct: 97   GFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPK--SYASVAEAVSSTDVEEDV 154

Query: 2301 SVVEEMQGLLQKISNGEQRG------QRLERATG---GKYLALRRRQVKVETEAWDQAAK 2149
            S  +E+Q LL ++   E+R       ++L+   G   G+YL LRRRQVK+ETEAW+ AAK
Sbjct: 155  SASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAK 214

Query: 2148 EYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYAPYFDQLP 1969
            EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLRD I K+QE CR GK KAAYAPYFDQLP
Sbjct: 215  EYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLP 274

Query: 1968 PEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXXXXXXXXX 1789
             +MM+VITMHKL+ LLMTGG HGS RVVQAA  +G+AIE EVRIH FL            
Sbjct: 275  ADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDK 334

Query: 1788 XE-GVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKVGSRLIE 1612
               G   D V  EQE LRK+VTNL+KKQK+   R IVK  D+SKPWG EA+AKVGSRLIE
Sbjct: 335  NVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIE 394

Query: 1611 MLIDTAYIQPPVD-QLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVRKGLDR 1435
            +L+ TAYIQPPVD QLAD PPDIRPAF H  KTV +E +K  RR+GVIECDPLV+KGL+R
Sbjct: 395  LLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLER 454

Query: 1434 TARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQLQPVFE 1255
            TARHMVIPY+PMLVPPL WTGYDKGA+LFLPSYVMRTHGARQQREAVKRAPR QL+PVFE
Sbjct: 455  TARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFE 514

Query: 1254 ALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRKWKWQL 1075
            AL+TLGN  WR+NKR+  VVDRIWA GG LADLVDR D+ LPEKPDTEDEA+LRKWKW++
Sbjct: 515  ALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKV 574

Query: 1074 RGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLC 895
            + VKK NSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHP+LNHLGSDLC
Sbjct: 575  KSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLC 634

Query: 894  RGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLE 715
            RGILEFAEGRPLG  GL WLKI LANL+AGGVDKLS++GRI FTENHL+DIFDSADRPLE
Sbjct: 635  RGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLE 694

Query: 714  GRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALGRDKLG 535
            G+RWWL AEDPFQ LA CINLSEALR SSPETTISH+PVH DGSCNGLQHYAALGRD+LG
Sbjct: 695  GKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLG 754

Query: 534  ATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKLVKQTV 355
            ATAVNLVAGEKPADVYS IAARVLDIM+RDA+KDPA  P A RAR+LINQVDRKLVKQTV
Sbjct: 755  ATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTV 814

Query: 354  MTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAARSIMSW 175
            MTSVYGVTYIGARDQIKRRLKER  I DD ELF A+CYAAK TLTALGEMFQAARSIMSW
Sbjct: 815  MTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSW 874

Query: 174  LGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 1
            LGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRET+ +MVKRQ
Sbjct: 875  LGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQ 932


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 1243 bits (3215), Expect = 0.0
 Identities = 623/843 (73%), Positives = 695/843 (82%), Gaps = 16/843 (1%)
 Frame = -1

Query: 2481 ELKNGVKCGFSAMGSRRNGELSTSGGCFGTLFEFSGLRNRVM-------GFASVAEAVSS 2323
            EL +     FS +G R  G +S+   C      F  +RN +        G+ASVAEAVSS
Sbjct: 81   ELSSCSSLRFSEVGFRGKGAISSPEDCMCKP-SFWSVRNPIWFNGFCPKGYASVAEAVSS 139

Query: 2322 TDAEDEVSVVEEMQGLLQKISNGEQRGQ------RLERATG---GKYLALRRRQVKVETE 2170
            TD E+EVSVV+E+Q LLQ++S  E+R        R  RA G   GKY  L+RRQ+K+ETE
Sbjct: 140  TDVEEEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETE 199

Query: 2169 AWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYA 1990
            AW++AAKEY+EL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+ I K+Q+ CR+GK K AYA
Sbjct: 200  AWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYA 259

Query: 1989 PYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXX 1810
            PY DQLP +MM+VITMHKLM LLMTGG HG+ RVV AA  +GEAIE EVRIHKFL     
Sbjct: 260  PYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRK 319

Query: 1809 XXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKV 1630
                     G E D+  KE+E L K+VTNL+KKQK++ VR IV + D SK W  EA+AKV
Sbjct: 320  KKVDKDQENG-ESDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKV 378

Query: 1629 GSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVR 1450
            GSRLIE+L  TA+IQPP DQLADGPPDIRPAF H  +TV K+ +  SRRYGVIECDPLV 
Sbjct: 379  GSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVL 438

Query: 1449 KGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQL 1270
            KGL++TARHMVIPYMPMLVPPLNWTGYDKG Y FLPSYVMR HGARQQREA+KR PREQL
Sbjct: 439  KGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQL 498

Query: 1269 QPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRK 1090
            +PVF+ALD LGN  WRVNKR+L VVDRIWASGG LADLVDR D+ LPE+PDTEDE  L+K
Sbjct: 499  EPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKK 558

Query: 1089 WKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHL 910
            WKW+++ VKKEN ERHSQRCD ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHL
Sbjct: 559  WKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 618

Query: 909  GSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSA 730
            GSD+CRGILEF EGRPLGK GL WLKI LANLYAGGVDKLS +GRIAFTENHL+DIFDS 
Sbjct: 619  GSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSV 678

Query: 729  DRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALG 550
            D+PLEGRRWWL AEDPFQCLAVCINL+EALR SSPET ISH+PVH DGSCNGLQHYAALG
Sbjct: 679  DKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALG 738

Query: 549  RDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKL 370
            RDKLGA +VNLV GEKPADVYS IA RVL+IM+RDAQKDP   P A RA+LLINQVDRKL
Sbjct: 739  RDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKL 798

Query: 369  VKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAAR 190
            VKQTVMTSVYGVTYIGARDQIKRRLKERG I DD E+F  +CYAAK TLTALGEMF+AAR
Sbjct: 799  VKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAAR 858

Query: 189  SIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 10
             IMSWLG+CAK+IASENQPVRWTTPLGLPVVQPYRK GRHLIKTSLQVLTLQRET+KVMV
Sbjct: 859  GIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMV 918

Query: 9    KRQ 1
            KRQ
Sbjct: 919  KRQ 921


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
            [Nicotiana tabacum]
          Length = 1002

 Score = 1239 bits (3206), Expect = 0.0
 Identities = 614/802 (76%), Positives = 687/802 (85%), Gaps = 9/802 (1%)
 Frame = -1

Query: 2379 SGLRNRVMGFASVAEAVSSTDAEDEVSVVEEMQGLLQKI--------SNGEQRGQRLERA 2224
            SG   R+  + S AEA+ ST  ED    ++E+Q L++++        +N + +  +    
Sbjct: 105  SGSLGRLRSYGSAAEAIVSTSEED----IDEIQELIEEMDKENEALKANLQPKQPKTIGG 160

Query: 2223 TG-GKYLALRRRQVKVETEAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRD 2047
             G GKY  LRRRQ+KVETEAW++AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRD
Sbjct: 161  MGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 2046 CIAKDQEQCREGKCKAAYAPYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINV 1867
             IA +Q+ C EGK + AYAP+FDQLP EMMAVITMHKLM LLMTGG  GSARVVQAA  +
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYI 280

Query: 1866 GEAIEHEVRIHKFLXXXXXXXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRD 1687
            GEAIEHE RIH+FL             E   P  + KE+E LRK+V  L+KKQK+R VR 
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEET-PGDMMKERERLRKKVKILMKKQKLRQVRK 339

Query: 1686 IVKRQDDSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTK 1507
            IVK+QDD KPWGQ+   KVG RLI++L++TAYIQPP DQL DGPPDIRPAF H LKTV  
Sbjct: 340  IVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV-- 397

Query: 1506 EQRKTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMR 1327
            E  K SRRYGVI+CDPLVRKGLD+TARHMVIPYMPMLVPP +W GYDKG YLFLPSY+MR
Sbjct: 398  ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMR 457

Query: 1326 THGARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDR 1147
            THGA+QQREAVKR P++QL+PVF+ALDTLGN  WRVN+++LG+VDRIWASGGRLADLVDR
Sbjct: 458  THGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDR 517

Query: 1146 EDIVLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYP 967
            ED+ LPE PDTEDEAE+RKWKW+++GVKKEN ERHSQRCDIELKLAVARKMKDEDGF+YP
Sbjct: 518  EDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYP 577

Query: 966  HNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLS 787
            HNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLG  GLRWLKI LAN+Y GGVDKLS
Sbjct: 578  HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLS 637

Query: 786  YDGRIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISH 607
            Y+GR+AF+ENHLEDIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALR  SPET IS+
Sbjct: 638  YEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISY 697

Query: 606  LPVHMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPA 427
            +P+H DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS IAARVLDIM+RDA KDPA
Sbjct: 698  MPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPA 757

Query: 426  SDPVAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAAS 247
            +DP   RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD ELFAA+
Sbjct: 758  NDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAA 817

Query: 246  CYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHL 67
            CYAAKTTLTALGEMF+AARSIMSWLGDCAK+IA EN PVRWTTPLGLPVVQPYRKLGRHL
Sbjct: 818  CYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHL 877

Query: 66   IKTSLQVLTLQRETDKVMVKRQ 1
            IKTSLQ+LTLQRETDKVMVKRQ
Sbjct: 878  IKTSLQILTLQRETDKVMVKRQ 899


>ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Nicotiana
            tomentosiformis]
          Length = 1002

 Score = 1238 bits (3203), Expect = 0.0
 Identities = 613/802 (76%), Positives = 687/802 (85%), Gaps = 9/802 (1%)
 Frame = -1

Query: 2379 SGLRNRVMGFASVAEAVSSTDAEDEVSVVEEMQGLLQKI--------SNGEQRGQRLERA 2224
            SG   R+  + S AEA+ ST  ED    ++E+Q L++++        +N + +  +    
Sbjct: 105  SGSLGRLRSYGSAAEAIVSTSEED----IDEIQELIEEMDKENEALKANLQPKQPKTIGG 160

Query: 2223 TG-GKYLALRRRQVKVETEAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRD 2047
             G GKY  LRRRQ+KVETEAW++AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRD
Sbjct: 161  MGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 2046 CIAKDQEQCREGKCKAAYAPYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINV 1867
             IA +Q+ C EGK + AYAP+FDQLP EMMAVITMHKLM LLMTGG  GSARVVQAA  +
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYI 280

Query: 1866 GEAIEHEVRIHKFLXXXXXXXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRD 1687
            GEAIEHE RIH+FL             E   P  + KE+E LRK+V  L+KKQK++ VR 
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEET-PGDMMKERERLRKKVKFLMKKQKLQQVRK 339

Query: 1686 IVKRQDDSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTK 1507
            IVK+QDD KPWGQ+   KVG RLI++L++TAYIQPP DQL DGPPDIRPAF H LKTV  
Sbjct: 340  IVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV-- 397

Query: 1506 EQRKTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMR 1327
            E  K SRRYGVI+CDPLVRKGLD+TARHMVIPYMPMLVPP +W GYDKG YLFLPSY+MR
Sbjct: 398  ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMR 457

Query: 1326 THGARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDR 1147
            THGA+QQREAVKR P++QL+PVF+ALDTLGN  WRVN+++LG+VDRIWASGGRLADLVDR
Sbjct: 458  THGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDR 517

Query: 1146 EDIVLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYP 967
            ED+ LPE PDTEDEAE+RKWKW+++GVKKEN ERHSQRCDIELKLAVARKMKDEDGF+YP
Sbjct: 518  EDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYP 577

Query: 966  HNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLS 787
            HNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLG  GLRWLKI LAN+Y GGVDKLS
Sbjct: 578  HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLS 637

Query: 786  YDGRIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISH 607
            Y+GR+AF+ENHLEDIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALR  SPET IS+
Sbjct: 638  YEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISY 697

Query: 606  LPVHMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPA 427
            +P+H DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS IAARVLDIM+RDA KDPA
Sbjct: 698  MPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPA 757

Query: 426  SDPVAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAAS 247
            +DP   RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD ELFAA+
Sbjct: 758  NDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAA 817

Query: 246  CYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHL 67
            CYAAKTTLTALGEMF+AARSIMSWLGDCAK+IA EN PVRWTTPLGLPVVQPYRKLGRHL
Sbjct: 818  CYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHL 877

Query: 66   IKTSLQVLTLQRETDKVMVKRQ 1
            IKTSLQ+LTLQRETDKVMVKRQ
Sbjct: 878  IKTSLQILTLQRETDKVMVKRQ 899


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score = 1237 bits (3201), Expect = 0.0
 Identities = 613/802 (76%), Positives = 687/802 (85%), Gaps = 9/802 (1%)
 Frame = -1

Query: 2379 SGLRNRVMGFASVAEAVSSTDAEDEVSVVEEMQGLLQKI--------SNGEQRGQRLERA 2224
            SG   R+  + S AEA+ ST  ED    ++E+Q L++++        +N + +  +    
Sbjct: 105  SGSLGRLRSYGSAAEAIVSTSEED----IDEIQELIEEMDKENEALKANLQPKQPKTIGG 160

Query: 2223 TG-GKYLALRRRQVKVETEAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRD 2047
             G GKY  LRRRQ+KVETEAW++AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRD
Sbjct: 161  MGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 2046 CIAKDQEQCREGKCKAAYAPYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINV 1867
             IA +Q+ C EGK + AYAP+FDQLP EMMAVITMHKLM LLMTGG  GSARVVQAA  +
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYI 280

Query: 1866 GEAIEHEVRIHKFLXXXXXXXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRD 1687
            GEAIEHE RIH+FL             E   P  + KE+E LRK+V  L+KKQK+R VR 
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEET-PGDMMKERERLRKKVKILMKKQKLRQVRK 339

Query: 1686 IVKRQDDSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTK 1507
            IVK+QDD KPWGQ+   KVG RLI++L++TAYIQPP DQL DGPPDIRPAF H LKTV  
Sbjct: 340  IVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV-- 397

Query: 1506 EQRKTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMR 1327
            E  K SRRYGVI+CDPLVRKGLD+TARHMVIPYMPMLVPP +W GYDKG YLFLPSY+MR
Sbjct: 398  ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMR 457

Query: 1326 THGARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDR 1147
            THGA+QQREAVKR P++QL+PVF+ALDTLGN  WRVN+++LG+V+RIWASGGRLADLVDR
Sbjct: 458  THGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDR 517

Query: 1146 EDIVLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYP 967
            ED+ LPE PDTEDEAE+RKWKW+++GVKKEN ERHSQRCDIELKLAVARKMKDEDGF+YP
Sbjct: 518  EDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYP 577

Query: 966  HNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLS 787
            HNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLG  GLRWLKI LAN+Y GGVDKLS
Sbjct: 578  HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLS 637

Query: 786  YDGRIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISH 607
            Y+GR+AF+ENHLEDIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EALR  SPET IS+
Sbjct: 638  YEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISY 697

Query: 606  LPVHMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPA 427
            +P+H DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS IAARVLDIM+RDA KDPA
Sbjct: 698  MPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPA 757

Query: 426  SDPVAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAAS 247
            +DP   RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD ELFAA+
Sbjct: 758  NDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAA 817

Query: 246  CYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHL 67
            CYAAKTTLTALGEMF+AARSIMSWLGDCAK+IA EN PVRWTTPLGLPVVQPYRKLGRHL
Sbjct: 818  CYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHL 877

Query: 66   IKTSLQVLTLQRETDKVMVKRQ 1
            IKTSLQ+LTLQRETDKVMVKRQ
Sbjct: 878  IKTSLQILTLQRETDKVMVKRQ 899


>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X1 [Prunus mume]
          Length = 1024

 Score = 1236 bits (3197), Expect = 0.0
 Identities = 619/843 (73%), Positives = 694/843 (82%), Gaps = 16/843 (1%)
 Frame = -1

Query: 2481 ELKNGVKCGFSAMGSRRNGELSTSGGCFGTLFEFSGLRNRV-------MGFASVAEAVSS 2323
            EL +     FS +G R  G +S+   C      F  +RN +        G+ASVAEAVSS
Sbjct: 81   ELSSCSSLRFSEVGFRGKGTISSPEDCMCKP-SFWSVRNPIGFNGFCPKGYASVAEAVSS 139

Query: 2322 TDAEDEVSVVEEMQGLLQKISNGEQRGQ------RLERATG---GKYLALRRRQVKVETE 2170
            TD E++VSVV+E+Q LLQ++S  E+R        R  RA G   GKY  L+RRQ+K+ETE
Sbjct: 140  TDVEEDVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETE 199

Query: 2169 AWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYA 1990
            AW++AAKEY+EL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+ I  +Q+ CR+GK KAAYA
Sbjct: 200  AWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDNEQDLCRKGKKKAAYA 259

Query: 1989 PYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXX 1810
            PY DQLP +MM+VITMHKLM LLMTGG HG+ RVV AA  +GEAIE EVRIHKFL     
Sbjct: 260  PYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRK 319

Query: 1809 XXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKV 1630
                     G E D+  KE+E L K+VTNL+KKQK++ VR IV + D SK W  EA+AK+
Sbjct: 320  KKVDKDQENG-ESDAAMKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKI 378

Query: 1629 GSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVR 1450
            GSRLIE+L  TA+IQPP DQLADGPPDIRPAF H  +TV K+ +  SRRYGVIECDPLV 
Sbjct: 379  GSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVL 438

Query: 1449 KGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQL 1270
            KGL++TARH++IPYMPMLVPPLNWTGYDKG Y FLPSYVMR HGARQQREA+KR PREQL
Sbjct: 439  KGLEKTARHVMIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQL 498

Query: 1269 QPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRK 1090
            +PVF+ALD LGN  WRVNKR+L VVDRIWASGG LADLVDR D+ LPE+PDTEDE  L+K
Sbjct: 499  EPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKK 558

Query: 1089 WKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHL 910
            WKW+++ VKKEN ERHSQRCDIELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHL
Sbjct: 559  WKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 618

Query: 909  GSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSA 730
            GSD+CRGILEF EGRPLGK GL WLKI LANLYAGGVDKLS +GRIAFTENHL+DIFDS 
Sbjct: 619  GSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSV 678

Query: 729  DRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALG 550
            D PLEGRRWWL AEDPFQCLAVCINL+EALR SSPET ISH+PVH DGSCNGLQHYAALG
Sbjct: 679  DIPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALG 738

Query: 549  RDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKL 370
            RDKLGA +VNLV GEKPADVYS IA RVL+IM+RDAQKDP   P A  A+LLINQVDRKL
Sbjct: 739  RDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPTVFPEALHAKLLINQVDRKL 798

Query: 369  VKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAAR 190
            VKQTVMTSVYGVTYIGARDQIKRRLKERG I DD E+F  +CYAAK TLTALGEMF+AAR
Sbjct: 799  VKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAAR 858

Query: 189  SIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 10
             IMSWLG+CAK+IASENQPVRWTTPLGLPVVQPYRK GRHLIKTSLQVLTLQRET+KVMV
Sbjct: 859  GIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMV 918

Query: 9    KRQ 1
            KRQ
Sbjct: 919  KRQ 921


>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 1234 bits (3194), Expect = 0.0
 Identities = 612/847 (72%), Positives = 704/847 (83%), Gaps = 32/847 (3%)
 Frame = -1

Query: 2445 MGSRRNGELSTSGGCFGTL--------FEFSGLRNRVMGFASVAEAVSSTDAEDEVSVVE 2290
            MG R+ G++++     G          +  SG  N   G+ASVAEA++STD E++ S  E
Sbjct: 58   MGFRQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSE 117

Query: 2289 EMQGLLQKI--------SNGEQRGQRLERATGGKYLALRRRQVKVETEAWDQAAKEYQEL 2134
            E+Q +L+ +        S+ +Q  + +     GKY  LR+RQ+K+ETEAW +AAKEYQEL
Sbjct: 118  EIQEMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQEL 177

Query: 2133 LADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYAPYFDQLPPEMMA 1954
            LADMCEQKLAPNLPY+KSLFLGWFEPLRD IA DQ+ C++   + ++APYFD LP + MA
Sbjct: 178  LADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMA 237

Query: 1953 VITMHKLMALLMT--GGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXXXXXXXXXXEG 1780
            VITMHKLM LLMT  GG+ GS RVVQAA  +GEAIEHEVRIH+FL               
Sbjct: 238  VITMHKLMGLLMTNNGGI-GSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKAE 296

Query: 1779 V--------------EPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEA 1642
                           E + ++KEQE LRK+V  L+K+QK++ VR IVK Q+D KPWGQEA
Sbjct: 297  ADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEA 356

Query: 1641 QAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECD 1462
              KVG RLI++L+DTAYIQPPVDQ+ DGPPDIRPAF H LKT+T++ +KTSRRYGVIECD
Sbjct: 357  HVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIECD 416

Query: 1461 PLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAP 1282
            P+VRKG+++TARHMV+PYMPMLVPP+NWTGYD+GAYLFLPSYVMRTHGA+QQRE VKR P
Sbjct: 417  PIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTP 476

Query: 1281 REQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEA 1102
            R+QL+PVFEALDTLG+  WRVNKR+LGV+DRIWASGGRLADLVDRED+ LPE+PDTEDEA
Sbjct: 477  RKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEA 536

Query: 1101 ELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPH 922
            E+RKWKW+L+  KKENSERHSQRCDIELKLA +RKMKDE+GF+YPHNLDFRGRAYPMHP+
Sbjct: 537  EIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPY 596

Query: 921  LNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDI 742
            LNHLGSD+CRGILEF+EGR LGK GLRWLKI LANLYAGGVDKLS+D R AFTENH+++I
Sbjct: 597  LNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEI 656

Query: 741  FDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHY 562
            FDSADRPLEGRRWWLGAEDPFQCLA CINL EALR  SPETTIS++PVH DGSCNGLQHY
Sbjct: 657  FDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHY 716

Query: 561  AALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQV 382
            AALGRDKLGA AVNLV G+KPADVYS IAARVLDIM+ DA+KDPA++P A  ARLLINQV
Sbjct: 717  AALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQV 776

Query: 381  DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMF 202
            DRKLVKQTVMTSVYGVTY+GARDQIKRRLKERG I DD  LFAA+CYAA+TTLTALGEMF
Sbjct: 777  DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMF 836

Query: 201  QAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETD 22
            +AARSIMSWLG+CAKVIASENQPVRW TPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETD
Sbjct: 837  EAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 896

Query: 21   KVMVKRQ 1
            KVMVKRQ
Sbjct: 897  KVMVKRQ 903


>ref|NP_001289502.1| DNA-directed RNA polymerase 1, mitochondrial [Nicotiana sylvestris]
            gi|21425663|emb|CAC95019.1| mitochondrial RNA polymerase
            [Nicotiana sylvestris]
          Length = 1002

 Score = 1234 bits (3193), Expect = 0.0
 Identities = 616/839 (73%), Positives = 698/839 (83%), Gaps = 9/839 (1%)
 Frame = -1

Query: 2490 SDSELKNGVKCGFSAMGSRRNGELSTSGGCFGTLFEFSGLRNRVMGFASVAEAVSSTDAE 2311
            S + L + VK  F   G R +G L                   +  + S AEA++ST  E
Sbjct: 85   SQNSLFSSVKGDFRVCGKRGSGSLGF-----------------LRSYGSAAEAIASTSEE 127

Query: 2310 DEVSVVEEMQGLLQKIS--------NGEQRGQRLERATG-GKYLALRRRQVKVETEAWDQ 2158
            D    ++E+Q L+++++        N + +  +     G GKY  LRRRQ+KVETEAW++
Sbjct: 128  D----IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEE 183

Query: 2157 AAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYAPYFD 1978
            AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRD IA +Q+ C EGK + AYAP+FD
Sbjct: 184  AAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFD 243

Query: 1977 QLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXXXXXX 1798
            QLP EMMAVITMHKLM LLMTGG  GSARVVQAA ++GEAIEHE RIH+FL         
Sbjct: 244  QLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNAL 303

Query: 1797 XXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKVGSRL 1618
                E   P  + KE+E LRK+V  L+KKQK++ VR IVK+QDD KPWGQ+   KVG RL
Sbjct: 304  SGDLEDT-PGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRL 362

Query: 1617 IEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVRKGLD 1438
            I++L++TAYIQPP DQL D PPDIRPAF H LKTV  E  K SRRYGVI+CDPLVRKGLD
Sbjct: 363  IQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMKGSRRYGVIQCDPLVRKGLD 420

Query: 1437 RTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQLQPVF 1258
            +TARHMVIPYMPMLVPP +W GYDKGAYLFLPSY+MRTHGA+QQREAVKR P++QL+PVF
Sbjct: 421  KTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480

Query: 1257 EALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRKWKWQ 1078
            +ALDTLGN  WR+N+++LG+VDRIWASGGRLADLVDRED+ LPE+PD EDEA++RKWKW+
Sbjct: 481  QALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWK 540

Query: 1077 LRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDL 898
            ++GVKKEN ERHSQRCDIELKLAVARKMKDEDGF+YPHNLDFRGRAYPMHP+LNHLGSDL
Sbjct: 541  VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600

Query: 897  CRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPL 718
            CRGILEFAEGRPLGK GLRWLKI LAN+Y GGVDKLSY+GR+AF+ENH+EDIFDSA+RPL
Sbjct: 601  CRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPL 660

Query: 717  EGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALGRDKL 538
            EG+RWWLGAEDPFQCLA CIN++EALR  SPET IS++P+H DGSCNGLQHYAALGRD L
Sbjct: 661  EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTL 720

Query: 537  GATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKLVKQT 358
            GA AVNLVAG+KPADVYS IAARVLDIM+RDA KDPA+DP   RARLLINQVDRKLVKQT
Sbjct: 721  GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780

Query: 357  VMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAARSIMS 178
            VMTSVYGVTYIGARDQIKRRLKERG IEDD ELFAA+CYAAKTTLTALGEMF+AARSIMS
Sbjct: 781  VMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840

Query: 177  WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 1
            WLGDCAK+IA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMVKRQ
Sbjct: 841  WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQ 899


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score = 1233 bits (3191), Expect = 0.0
 Identities = 610/805 (75%), Positives = 687/805 (85%), Gaps = 9/805 (1%)
 Frame = -1

Query: 2388 FEFSGLRNRVMGFASVAEAVSSTDAEDEVSVVEEMQGLLQKIS--------NGEQRGQRL 2233
            F   G    +  + S AEA++ST  ED    ++E+Q L+++++        N + +  + 
Sbjct: 94   FRVCGSLGILRSYGSAAEAIASTSEED----IDEIQELIEEMNKENEALKTNLQPKQPKT 149

Query: 2232 ERATG-GKYLALRRRQVKVETEAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEP 2056
                G GKY  LRRRQ+KVETEAW+ AAKEYQELL DMCEQKLAPNLPY+KSLFLGWFEP
Sbjct: 150  VGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEP 209

Query: 2055 LRDCIAKDQEQCREGKCKAAYAPYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAA 1876
            LRD IA +Q+ C EGK + AYAP+FDQLP EMMAVITMHKLM LLMTGG  GSARVVQAA
Sbjct: 210  LRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAA 269

Query: 1875 INVGEAIEHEVRIHKFLXXXXXXXXXXXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRH 1696
             ++GEAIEHE RIH+FL             E      + KE+E LRK+V  L+KKQK++ 
Sbjct: 270  SHIGEAIEHEARIHRFLEKTKKNALDGSLEETA--GDIMKERERLRKKVKILMKKQKLQQ 327

Query: 1695 VRDIVKRQDDSKPWGQEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKT 1516
            VR IVK+QDD KPWGQ+   KVG +LI++LI+TAYIQPP DQL D PPDIRPAF H LKT
Sbjct: 328  VRKIVKQQDDEKPWGQDNLVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKT 387

Query: 1515 VTKEQRKTSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSY 1336
            V  E  K SRRYGVI+CDPLVRKGLD+TARHMVIPYMPMLVPP NW+GYD+GAYLFLPSY
Sbjct: 388  V--ETVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSY 445

Query: 1335 VMRTHGARQQREAVKRAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADL 1156
            +MRTHGA+QQREAVKR P++QL+PVF+ALDTLGN  WRVNKR+LG++DRIWASGGRLADL
Sbjct: 446  IMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADL 505

Query: 1155 VDREDIVLPEKPDTEDEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGF 976
            VDRED+ LPE+PDTEDE E++KWKW+++  KKEN ERHSQRCDIELKLAVARKMKDE+GF
Sbjct: 506  VDREDVPLPEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGF 565

Query: 975  FYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVD 796
            +YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF+EGRPLGK GLRWLKI LAN+Y GGVD
Sbjct: 566  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVD 625

Query: 795  KLSYDGRIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETT 616
            KLSY+GR AF+ENH+EDIFDSADRPLEGRRWWLGAEDPFQCLA CIN+SEALR  SPET+
Sbjct: 626  KLSYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETS 685

Query: 615  ISHLPVHMDGSCNGLQHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQK 436
            ISH+P+H DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYS IAARVLDIM+RDA K
Sbjct: 686  ISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADK 745

Query: 435  DPASDPVAKRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELF 256
            DPA+DP   RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG IEDD ELF
Sbjct: 746  DPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELF 805

Query: 255  AASCYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLG 76
            +A+CYAAKTTLTALGEMF+AARSIMSWLGDCAK+IA ENQPVRWTTPLGLPVVQPYRKLG
Sbjct: 806  SAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLG 865

Query: 75   RHLIKTSLQVLTLQRETDKVMVKRQ 1
            RHLIKTSLQ+LTLQRETDKVMVKRQ
Sbjct: 866  RHLIKTSLQILTLQRETDKVMVKRQ 890


>ref|XP_012491228.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Gossypium
            raimondii] gi|763775856|gb|KJB42979.1| hypothetical
            protein B456_007G178100 [Gossypium raimondii]
          Length = 1028

 Score = 1233 bits (3190), Expect = 0.0
 Identities = 621/850 (73%), Positives = 694/850 (81%), Gaps = 23/850 (2%)
 Frame = -1

Query: 2481 ELKNGVKC---GFSAMGSRRNGELSTSGGCFGTLFEFSGLRNRV---------MGFASVA 2338
            +LK G  C   GF  MG R+ GE+  +  C G    F  LRN +          G+ASVA
Sbjct: 78   KLKFGSFCSSSGFLDMGGRKIGEVLGNEDCMGKP-NFGLLRNEIGCRLRGLCPNGYASVA 136

Query: 2337 EAVSSTDAEDEVSVVEEMQGLLQKISNGEQRGQRLERAT----------GGKYLALRRRQ 2188
            E  SSTD ED+VS VEE++ LL ++   E R + + R            G KY  L+ RQ
Sbjct: 137  EVASSTDVEDDVSAVEEIKELLNEMKK-EHRRENINRRKILQIQETGMGGNKYRMLKSRQ 195

Query: 2187 VKVETEAWDQAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGK 2008
            VK+ETEAW+QAA EY+ELL DMCEQKLAPNLPYMKSLFLGWFEP RD I K+QE  R GK
Sbjct: 196  VKIETEAWEQAANEYRELLKDMCEQKLAPNLPYMKSLFLGWFEPFRDAIIKEQELYRSGK 255

Query: 2007 CKAAYAPYFDQLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKF 1828
             +A YA Y DQLP +M AVITMHKLM LLMTGG HG ARVVQAA  +G+AIE EVRI  F
Sbjct: 256  LRAGYAAYLDQLPADMAAVITMHKLMGLLMTGGEHGCARVVQAACLIGDAIEQEVRIRNF 315

Query: 1827 LXXXXXXXXXXXXXE-GVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWG 1651
            L             + G E ++  KEQE LRK+VTNL+KKQK+  VR IVK QD++KPWG
Sbjct: 316  LENTRKKKVDKEDEDEGSESNAAIKEQERLRKKVTNLIKKQKLPAVRQIVKGQDNTKPWG 375

Query: 1650 QEAQAKVGSRLIEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVI 1471
            Q+A+AKVG  LIE+L+ TAYIQPP DQLAD PPDIRPAF H  KTV KE +KT RRYGVI
Sbjct: 376  QDAKAKVGCHLIELLMRTAYIQPPADQLADTPPDIRPAFLHSFKTVVKENKKTGRRYGVI 435

Query: 1470 ECDPLVRKGLDRTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVK 1291
            ECDPLVRKGL+RTARHMVIPYMPMLVPP+ WTGYD+GAYLFLPSY+MRTHGA+QQREAVK
Sbjct: 436  ECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAVK 495

Query: 1290 RAPREQLQPVFEALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTE 1111
            R P  QL+ VFEALDTLG   WR+NKR+L VVDRIW SGGRLAD+VDR D+  PEKPDTE
Sbjct: 496  RTPTNQLEQVFEALDTLGYTKWRINKRVLNVVDRIWTSGGRLADMVDRNDVPFPEKPDTE 555

Query: 1110 DEAELRKWKWQLRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPM 931
            DEA LRKWKW++R VKKEN ERHSQRCDIELKLAVAR+MKDE+GF+YPHNLDFRGRAYPM
Sbjct: 556  DEALLRKWKWKVRSVKKENRERHSQRCDIELKLAVARRMKDEEGFYYPHNLDFRGRAYPM 615

Query: 930  HPHLNHLGSDLCRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHL 751
            HP+LNHLGSDLCRG+LEFAEGRPLG+ GL WLKI LANL+AGGVDKLS +GR+AFTENHL
Sbjct: 616  HPYLNHLGSDLCRGVLEFAEGRPLGRSGLNWLKIHLANLFAGGVDKLSLEGRLAFTENHL 675

Query: 750  EDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGL 571
            +DIFDSADRPLEG+RWWL AEDPFQCLAVCINL+EALR SSPET +SH+PVH DGSCNGL
Sbjct: 676  DDIFDSADRPLEGKRWWLKAEDPFQCLAVCINLTEALRSSSPETFVSHIPVHQDGSCNGL 735

Query: 570  QHYAALGRDKLGATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLI 391
            QHYAALGRDKLGA AVNLVAGEKPADVYS IA RVLDIM+ DAQKDP+  P A  A++L+
Sbjct: 736  QHYAALGRDKLGAAAVNLVAGEKPADVYSGIAGRVLDIMRIDAQKDPSVFPDALLAKILV 795

Query: 390  NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALG 211
            NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I D++ELF ASCYAAKTTLTALG
Sbjct: 796  NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDERELFVASCYAAKTTLTALG 855

Query: 210  EMFQAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQR 31
            EMFQAAR+IM WLG+CAK+IASENQPV WTTPLGLPVVQPYR LGRHLIKTSLQVLTLQR
Sbjct: 856  EMFQAARAIMIWLGECAKIIASENQPVSWTTPLGLPVVQPYRALGRHLIKTSLQVLTLQR 915

Query: 30   ETDKVMVKRQ 1
            ET+K+MVKRQ
Sbjct: 916  ETEKIMVKRQ 925


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor [Nicotiana
            sylvestris] gi|15824083|dbj|BAB69431.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1002

 Score = 1233 bits (3190), Expect = 0.0
 Identities = 615/839 (73%), Positives = 698/839 (83%), Gaps = 9/839 (1%)
 Frame = -1

Query: 2490 SDSELKNGVKCGFSAMGSRRNGELSTSGGCFGTLFEFSGLRNRVMGFASVAEAVSSTDAE 2311
            S + L + VK  F   G R +G L                   +  + S AEA++ST  E
Sbjct: 85   SQNSLFSSVKGDFRVCGKRGSGSLGF-----------------LRSYGSAAEAIASTSEE 127

Query: 2310 DEVSVVEEMQGLLQKIS--------NGEQRGQRLERATG-GKYLALRRRQVKVETEAWDQ 2158
            D    ++E+Q L+++++        N + +  +     G GKY  LRRRQ+KVETEAW++
Sbjct: 128  D----IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEE 183

Query: 2157 AAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCIAKDQEQCREGKCKAAYAPYFD 1978
            AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRD IA +Q+ C EGK + AYAP+FD
Sbjct: 184  AAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFD 243

Query: 1977 QLPPEMMAVITMHKLMALLMTGGVHGSARVVQAAINVGEAIEHEVRIHKFLXXXXXXXXX 1798
            QLP EMMAVITMHKLM LLMTGG  GSARVVQAA ++GEAIEHE RIH+FL         
Sbjct: 244  QLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNAL 303

Query: 1797 XXXXEGVEPDSVSKEQEHLRKRVTNLLKKQKVRHVRDIVKRQDDSKPWGQEAQAKVGSRL 1618
                E   P  + KE+E +RK+V  L+KKQK++ VR IVK+QDD KPWGQ+   KVG RL
Sbjct: 304  SGDLEDT-PGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRL 362

Query: 1617 IEMLIDTAYIQPPVDQLADGPPDIRPAFRHYLKTVTKEQRKTSRRYGVIECDPLVRKGLD 1438
            I++L++TAYIQPP DQL D PPDIRPAF H LKTV  E  K SRRYGVI+CDPLVRKGLD
Sbjct: 363  IQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMKGSRRYGVIQCDPLVRKGLD 420

Query: 1437 RTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPREQLQPVF 1258
            +TARHMVIPYMPMLVPP +W GYDKGAYLFLPSY+MRTHGA+QQREAVKR P++QL+PVF
Sbjct: 421  KTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480

Query: 1257 EALDTLGNATWRVNKRILGVVDRIWASGGRLADLVDREDIVLPEKPDTEDEAELRKWKWQ 1078
            +ALDTLGN  WR+N+++LG+VDRIWASGGRLADLVDRED+ LPE+PD EDEA++RKWKW+
Sbjct: 481  QALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWK 540

Query: 1077 LRGVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDL 898
            ++GVKKEN ERHSQRCDIELKLAVARKMKDEDGF+YPHNLDFRGRAYPMHP+LNHLGSDL
Sbjct: 541  VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600

Query: 897  CRGILEFAEGRPLGKLGLRWLKIQLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPL 718
            CRGILEFAEGRPLGK GLRWLKI LAN+Y GGVDKLSY+GR+AF+ENH+EDIFDSA+RPL
Sbjct: 601  CRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPL 660

Query: 717  EGRRWWLGAEDPFQCLAVCINLSEALRRSSPETTISHLPVHMDGSCNGLQHYAALGRDKL 538
            EG+RWWLGAEDPFQCLA CIN++EALR  SPET IS++P+H DGSCNGLQHYAALGRD L
Sbjct: 661  EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTL 720

Query: 537  GATAVNLVAGEKPADVYSEIAARVLDIMQRDAQKDPASDPVAKRARLLINQVDRKLVKQT 358
            GA AVNLVAG+KPADVYS IAARVLDIM+RDA KDPA+DP   RARLLINQVDRKLVKQT
Sbjct: 721  GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780

Query: 357  VMTSVYGVTYIGARDQIKRRLKERGFIEDDKELFAASCYAAKTTLTALGEMFQAARSIMS 178
            VMTSVYGVTYIGARDQIKRRLKERG IEDD ELFAA+CYAAKTTLTALGEMF+AARSIMS
Sbjct: 781  VMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840

Query: 177  WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 1
            WLGDCAK+IA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMVKRQ
Sbjct: 841  WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQ 899