BLASTX nr result
ID: Cinnamomum25_contig00010831
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00010831
(204 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHN44540.1| Protein LSM12 like [Glycine soja] 86 1e-14
ref|XP_003532027.1| PREDICTED: uncharacterized protein LOC100499... 86 1e-14
ref|XP_003628665.1| LSM12-like protein [Medicago truncatula] gi|... 85 2e-14
ref|NP_001235419.1| uncharacterized protein LOC100306463 [Glycin... 84 4e-14
ref|XP_004509862.1| PREDICTED: protein LSM12 homolog [Cicer arie... 84 5e-14
ref|XP_012467054.1| PREDICTED: protein LSM12 homolog [Gossypium ... 82 1e-13
gb|KHG27703.1| Protein LSM12 A [Gossypium arboreum] 82 1e-13
ref|XP_007044541.1| RNA-processing [Theobroma cacao] gi|50870847... 82 1e-13
gb|KEH19490.1| anticodon-binding domain protein [Medicago trunca... 82 2e-13
ref|XP_009798322.1| PREDICTED: protein LSM12 homolog [Nicotiana ... 81 2e-13
ref|XP_007153663.1| hypothetical protein PHAVU_003G054400g [Phas... 81 3e-13
ref|XP_006340109.1| PREDICTED: protein LSM12 homolog [Solanum tu... 80 4e-13
gb|AGV54851.1| hypothetical protein [Phaseolus vulgaris] 80 4e-13
ref|XP_004237256.1| PREDICTED: protein LSM12 homolog [Solanum ly... 80 4e-13
gb|AFK47369.1| unknown [Lotus japonicus] 80 5e-13
gb|AFK45434.1| unknown [Lotus japonicus] 80 5e-13
ref|XP_004135229.1| PREDICTED: protein LSM12 homolog A [Cucumis ... 79 2e-12
gb|AFK36050.1| unknown [Lotus japonicus] 79 2e-12
ref|XP_011025589.1| PREDICTED: uncharacterized protein LOC105126... 78 2e-12
ref|XP_008389600.1| PREDICTED: uncharacterized protein LOC103451... 78 2e-12
>gb|KHN44540.1| Protein LSM12 like [Glycine soja]
Length = 186
Score = 85.5 bits (210), Expect = 1e-14
Identities = 46/68 (67%), Positives = 48/68 (70%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL + R GVGVTSEAQ IFDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 87 FLDLTALQQREDVAVRQAEADAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIVVMNEVR 146
Query: 24 VSSPYHSE 1
VSSPYHSE
Sbjct: 147 VSSPYHSE 154
>ref|XP_003532027.1| PREDICTED: uncharacterized protein LOC100499950 [Glycine max]
gi|734345205|gb|KHN10621.1| Protein LSM12 like [Glycine
soja]
Length = 186
Score = 85.5 bits (210), Expect = 1e-14
Identities = 46/68 (67%), Positives = 48/68 (70%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL + R GVGVTSEAQ IFDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 87 FLDLTALQQREDVAVRQAEADAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIVVMNEVR 146
Query: 24 VSSPYHSE 1
VSSPYHSE
Sbjct: 147 VSSPYHSE 154
>ref|XP_003628665.1| LSM12-like protein [Medicago truncatula]
gi|355522687|gb|AET03141.1| anticodon-binding domain
protein [Medicago truncatula]
gi|388519341|gb|AFK47732.1| unknown [Medicago
truncatula]
Length = 188
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -1
Query: 129 GVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVRVSSPYHSE 1
GVGVTSEAQ IFDAL+KTLPVRWDKTVIVVMNEVRVSSPYHSE
Sbjct: 114 GVGVTSEAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYHSE 156
>ref|NP_001235419.1| uncharacterized protein LOC100306463 [Glycine max]
gi|255628619|gb|ACU14654.1| unknown [Glycine max]
Length = 186
Score = 84.0 bits (206), Expect = 4e-14
Identities = 45/68 (66%), Positives = 48/68 (70%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL + R GVGVTSEAQ IFDAL++TLPVRWDKTVIVVMNEVR
Sbjct: 87 FLDLTALQQREDVAVRQAEADAERIGVGVTSEAQSIFDALSETLPVRWDKTVIVVMNEVR 146
Query: 24 VSSPYHSE 1
VSSPYHSE
Sbjct: 147 VSSPYHSE 154
>ref|XP_004509862.1| PREDICTED: protein LSM12 homolog [Cicer arietinum]
Length = 185
Score = 83.6 bits (205), Expect = 5e-14
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -1
Query: 129 GVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVRVSSPYHSE 1
GVGVT+EAQ IFDAL+KTLPVRWDKTVIVVMNEVRVSSPYHSE
Sbjct: 111 GVGVTNEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYHSE 153
>ref|XP_012467054.1| PREDICTED: protein LSM12 homolog [Gossypium raimondii]
gi|763747621|gb|KJB15060.1| hypothetical protein
B456_002G161300 [Gossypium raimondii]
Length = 175
Score = 82.0 bits (201), Expect = 1e-13
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL S RFGVGVTSEAQ +FDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 77 FLDLTSLQAREDSAIRQAEADSERFGVGVTSEAQTLFDALSKTLPVRWDKTVIVVMNEVR 136
Query: 24 VSSPYHSE 1
VSSPY E
Sbjct: 137 VSSPYLPE 144
>gb|KHG27703.1| Protein LSM12 A [Gossypium arboreum]
Length = 175
Score = 82.0 bits (201), Expect = 1e-13
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL S RFGVGVTSEAQ +FDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 77 FLDLTSLQAREDSAIRQAEADSERFGVGVTSEAQTLFDALSKTLPVRWDKTVIVVMNEVR 136
Query: 24 VSSPYHSE 1
VSSPY E
Sbjct: 137 VSSPYLPE 144
>ref|XP_007044541.1| RNA-processing [Theobroma cacao] gi|508708476|gb|EOY00373.1|
RNA-processing [Theobroma cacao]
Length = 175
Score = 82.0 bits (201), Expect = 1e-13
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL S RFGVGVTSEAQ +FDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 77 FLDLTSLQAREDCAIRQAEADSERFGVGVTSEAQSLFDALSKTLPVRWDKTVIVVMNEVR 136
Query: 24 VSSPYHSE 1
VSSPY E
Sbjct: 137 VSSPYLPE 144
>gb|KEH19490.1| anticodon-binding domain protein [Medicago truncatula]
Length = 324
Score = 81.6 bits (200), Expect = 2e-13
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = -1
Query: 129 GVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVRVSSPYHSE 1
GVGVTSEAQ IFDAL+KTLPVRWDKTVIVVMNEVR+SSPYH +
Sbjct: 217 GVGVTSEAQNIFDALSKTLPVRWDKTVIVVMNEVRISSPYHPD 259
>ref|XP_009798322.1| PREDICTED: protein LSM12 homolog [Nicotiana sylvestris]
Length = 179
Score = 81.3 bits (199), Expect = 2e-13
Identities = 45/68 (66%), Positives = 47/68 (69%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL S RFGVGVT+EAQ IFDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 81 FLDLNSLQSREDSAIRQAQIDAERFGVGVTAEAQTIFDALSKTLPVRWDKTVIVVMNEVR 140
Query: 24 VSSPYHSE 1
VSSPY E
Sbjct: 141 VSSPYLPE 148
>ref|XP_007153663.1| hypothetical protein PHAVU_003G054400g [Phaseolus vulgaris]
gi|561027017|gb|ESW25657.1| hypothetical protein
PHAVU_003G054400g [Phaseolus vulgaris]
Length = 185
Score = 80.9 bits (198), Expect = 3e-13
Identities = 43/68 (63%), Positives = 46/68 (67%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL + R GVGVTSEAQ IFDAL+KTLPVRWDKTVIVVMN+VR
Sbjct: 86 FLDLAALQAREEVAIRQAEADAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIVVMNDVR 145
Query: 24 VSSPYHSE 1
V SPYH E
Sbjct: 146 VGSPYHPE 153
>ref|XP_006340109.1| PREDICTED: protein LSM12 homolog [Solanum tuberosum]
Length = 179
Score = 80.5 bits (197), Expect = 4e-13
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
+LDL S RFG+GVT+EAQ IFDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 81 YLDLSSLQAREDSALRQAEIDAERFGIGVTAEAQNIFDALSKTLPVRWDKTVIVVMNEVR 140
Query: 24 VSSPYHSE 1
VSSPY E
Sbjct: 141 VSSPYLPE 148
>gb|AGV54851.1| hypothetical protein [Phaseolus vulgaris]
Length = 185
Score = 80.5 bits (197), Expect = 4e-13
Identities = 42/68 (61%), Positives = 46/68 (67%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL + R GVGVTSEAQ IFDAL+KTLPVRWDKTVI+VMN+VR
Sbjct: 86 FLDLAALQAREEVAIRQAEADAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIIVMNDVR 145
Query: 24 VSSPYHSE 1
V SPYH E
Sbjct: 146 VGSPYHPE 153
>ref|XP_004237256.1| PREDICTED: protein LSM12 homolog [Solanum lycopersicum]
Length = 179
Score = 80.5 bits (197), Expect = 4e-13
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
+LDL S RFG+GVT+EAQ IFDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 81 YLDLSSLQSREDSALRQAEIDAERFGIGVTAEAQNIFDALSKTLPVRWDKTVIVVMNEVR 140
Query: 24 VSSPYHSE 1
VSSPY E
Sbjct: 141 VSSPYLPE 148
>gb|AFK47369.1| unknown [Lotus japonicus]
Length = 181
Score = 80.1 bits (196), Expect = 5e-13
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL + R GVGVTSEAQ IFDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 82 FLDLTALQAREVVAIRQAEADAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIVVMNEVR 141
Query: 24 VSSPYHSE 1
V SPY+S+
Sbjct: 142 VGSPYNSD 149
>gb|AFK45434.1| unknown [Lotus japonicus]
Length = 181
Score = 80.1 bits (196), Expect = 5e-13
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL + R GVGVTSEAQ IFDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 82 FLDLTALQAREVVAIRQAEADAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIVVMNEVR 141
Query: 24 VSSPYHSE 1
V SPY+S+
Sbjct: 142 VGSPYNSD 149
>ref|XP_004135229.1| PREDICTED: protein LSM12 homolog A [Cucumis sativus]
gi|700196653|gb|KGN51830.1| hypothetical protein
Csa_5G603270 [Cucumis sativus]
Length = 181
Score = 78.6 bits (192), Expect = 2e-12
Identities = 39/43 (90%), Positives = 40/43 (93%)
Frame = -1
Query: 129 GVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVRVSSPYHSE 1
GVGVTSEAQ IFDAL+KTLPVRWDKTVIVVMNEVRVSSPY E
Sbjct: 108 GVGVTSEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 150
>gb|AFK36050.1| unknown [Lotus japonicus]
Length = 181
Score = 78.6 bits (192), Expect = 2e-12
Identities = 42/68 (61%), Positives = 46/68 (67%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL + R GVGVTSEAQ IFDAL+KTLPVRWDKTVIV MNEVR
Sbjct: 82 FLDLTALQAREVVAIRQAEADAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIVAMNEVR 141
Query: 24 VSSPYHSE 1
V SPY+S+
Sbjct: 142 VGSPYNSD 149
>ref|XP_011025589.1| PREDICTED: uncharacterized protein LOC105126417 [Populus
euphratica]
Length = 190
Score = 78.2 bits (191), Expect = 2e-12
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = -1
Query: 129 GVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVRVSSPYHSE 1
GVGVT+EAQ IFDAL+KTLPVRWDKTVIVVMNEVRVSSPY +E
Sbjct: 117 GVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLAE 159
>ref|XP_008389600.1| PREDICTED: uncharacterized protein LOC103451931 isoform X2 [Malus
domestica]
Length = 179
Score = 78.2 bits (191), Expect = 2e-12
Identities = 43/68 (63%), Positives = 45/68 (66%)
Frame = -1
Query: 204 FLDLPSXXXXXXXXXXXXXXXXXRFGVGVTSEAQRIFDALAKTLPVRWDKTVIVVMNEVR 25
FLDL S R GVGVT +AQ IFDAL+KTLPVRWDKTVIVVMNEVR
Sbjct: 81 FLDLNSLRAREELAIRQAEAESERIGVGVTGQAQNIFDALSKTLPVRWDKTVIVVMNEVR 140
Query: 24 VSSPYHSE 1
VSSPY E
Sbjct: 141 VSSPYTPE 148