BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00008939
         (834 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010245501.1| PREDICTED: sigma factor binding protein 1, c...    78   6e-12
ref|XP_010276684.1| PREDICTED: sigma factor binding protein 1, c...    77   1e-11
ref|XP_007028444.1| VQ motif-containing protein, putative [Theob...    59   3e-06

>ref|XP_010245501.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 145

 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 49/127 (38%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
 Frame = +1

Query: 322 MDTPSLHLNRSLKQTXXXXXXXXXXXXSNPMKVKTSVSKFRSVVQGLTGRDSDPTHMEKL 501
           MD  S+H  +  KQ             SNPMKVKTS S+FR++VQ LTGRDSD T   + 
Sbjct: 1   MDKLSVHQRKGAKQAKSKNKPIKVVYISNPMKVKTSASQFRALVQELTGRDSDETDATRF 60

Query: 502 LGINGVDEPQRIPDQEIE-GEDDKSDCARLVPGAVDHXXXXXXXXXXXXIEPFDDVFPAE 678
              + VD  Q +PDQ  +   DD  +  R     VD              EPF+DVF  +
Sbjct: 61  SDFDSVDGVQVVPDQVAKVTYDDSPEIPR-----VDTYQESPASSDSNLFEPFNDVFTPQ 115

Query: 679 MIENFTG 699
           M+E+F G
Sbjct: 116 MLESFAG 122


>ref|XP_010276684.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 142

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 53/133 (39%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
 Frame = +1

Query: 322 MDTPSLHLNRSLKQTXXXXXXXXXXXXSNPMKVKTSVSKFRSVVQGLTGRDSDPTHMEKL 501
           MD  S+   ++ KQ             SNPMKVKTS S+FR++VQ LTGRDSD T  + +
Sbjct: 1   MDKLSVQQKKAAKQAKSKKKPIKVVYISNPMKVKTSASEFRALVQELTGRDSDLT--DTV 58

Query: 502 LGINGVDEPQRIPDQEIEGEDDKSDCARLVPGAVDHXXXXXXXXXXXXIEPFDDVFPAEM 681
              +  D  QR+PDQ I+     ++    VP  VD             +EPFDDVF  +M
Sbjct: 59  ARFSDTDSVQRVPDQPIK---ITNEGVAEVP-RVDAYQESPAASSDSLLEPFDDVFTPQM 114

Query: 682 IENFTG-LPARFF 717
           +ENF G LP   F
Sbjct: 115 LENFVGFLPPCLF 127


>ref|XP_007028444.1| VQ motif-containing protein, putative [Theobroma cacao]
           gi|508717049|gb|EOY08946.1| VQ motif-containing protein,
           putative [Theobroma cacao]
          Length = 154

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
 Frame = +1

Query: 403 SNPMKVKTSVSKFRSVVQGLTGRDS---DPTHMEKLLGINGVDEPQRIPDQEIEGEDDKS 573
           SNPMKVKTS SKFR++VQ LTG+D+   DPT        + V   Q++PD      DD +
Sbjct: 35  SNPMKVKTSASKFRALVQELTGQDAELPDPTKFTD-TDDDDVGSNQKVPDAVKNSTDDHA 93

Query: 574 -DCARLVPGAVDHXXXXXXXXXXXXIEPFDDVFPAEMIENF 693
            +  R+   AV H             E FD+VF  +M+  F
Sbjct: 94  LEVPRVGDQAVHHHEQPTRAHHDVPFETFDEVFTPQMLREF 134