BLASTX nr result

ID: Cinnamomum25_contig00007003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00007003
         (404 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010279446.1| PREDICTED: serine/arginine-rich SC35-like sp...    99   1e-18
gb|AGV54347.1| serine/arginine rich splicing factor [Phaseolus v...    91   3e-18
ref|XP_006857008.2| PREDICTED: serine/arginine-rich SC35-like sp...    97   3e-18
ref|XP_011627996.1| PREDICTED: serine/arginine-rich SC35-like sp...    97   3e-18
gb|ERN18475.1| hypothetical protein AMTR_s00197p00027080 [Ambore...    97   3e-18
gb|KJB72543.1| hypothetical protein B456_011G183900 [Gossypium r...    97   5e-18
gb|KJB72542.1| hypothetical protein B456_011G183900 [Gossypium r...    97   5e-18
ref|XP_012455872.1| PREDICTED: serine/arginine-rich SC35-like sp...    97   5e-18
ref|XP_009352184.1| PREDICTED: serine/arginine-rich SC35-like sp...    96   7e-18
ref|XP_009352183.1| PREDICTED: serine/arginine-rich SC35-like sp...    96   7e-18
ref|XP_008390759.1| PREDICTED: serine/arginine-rich splicing fac...    96   7e-18
ref|XP_008390758.1| PREDICTED: serine/arginine-rich splicing fac...    96   7e-18
ref|XP_002516840.1| serine/arginine rich splicing factor, putati...    95   2e-17
ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M...    95   2e-17
ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [M...    95   2e-17
ref|XP_008795098.1| PREDICTED: serine/arginine-rich SC35-like sp...    95   2e-17
ref|XP_010904837.1| PREDICTED: serine/arginine-rich SC35-like sp...    94   3e-17
ref|XP_009369081.1| PREDICTED: serine/arginine-rich SC35-like sp...    94   3e-17
ref|XP_009369080.1| PREDICTED: serine/arginine-rich SC35-like sp...    94   3e-17
ref|XP_008223085.1| PREDICTED: serine/arginine-rich splicing fac...    94   3e-17

>ref|XP_010279446.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           [Nelumbo nucifera]
          Length = 330

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFRN +DAAEAKQ +NHQVIGGREITIV+AEENRKTPQEMRT A
Sbjct: 86  EPRGFGFVKFRNADDAAEAKQHMNHQVIGGREITIVFAEENRKTPQEMRTNA 137


>gb|AGV54347.1| serine/arginine rich splicing factor [Phaseolus vulgaris]
          Length = 261

 Score = 90.5 bits (223), Expect(2) = 3e-18
 Identities = 42/51 (82%), Positives = 46/51 (90%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R GEDAAEAKQ LNH +IGGREI IV+AEENRKTPQEMR +
Sbjct: 92  EPRGFGFVKYRYGEDAAEAKQHLNHTIIGGREIRIVFAEENRKTPQEMRVS 142



 Score = 27.7 bits (60), Expect(2) = 3e-18
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 242 LVEDMEEGATEGEPHQDPQGADIVPI 165
           L E ++ G  EGE   DP  ADI PI
Sbjct: 144 LEEVLDMGVVEGEIDLDPHSADIAPI 169


>ref|XP_006857008.2| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           isoform X2 [Amborella trichopoda]
          Length = 354

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFRN +DAAEAKQQ+NHQ+IGGREITIV+AEENRKTPQEMR  A
Sbjct: 106 EPRGFGFVKFRNPDDAAEAKQQMNHQIIGGREITIVFAEENRKTPQEMRVNA 157


>ref|XP_011627996.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           isoform X1 [Amborella trichopoda]
          Length = 355

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFRN +DAAEAKQQ+NHQ+IGGREITIV+AEENRKTPQEMR  A
Sbjct: 106 EPRGFGFVKFRNPDDAAEAKQQMNHQIIGGREITIVFAEENRKTPQEMRVNA 157


>gb|ERN18475.1| hypothetical protein AMTR_s00197p00027080 [Amborella trichopoda]
          Length = 183

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFRN +DAAEAKQQ+NHQ+IGGREITIV+AEENRKTPQEMR  A
Sbjct: 106 EPRGFGFVKFRNPDDAAEAKQQMNHQIIGGREITIVFAEENRKTPQEMRVNA 157


>gb|KJB72543.1| hypothetical protein B456_011G183900 [Gossypium raimondii]
          Length = 295

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFR GEDAAEAKQ++NHQVIGGREI IV+AEENRKTPQEMR TA
Sbjct: 88  EPRGFGFVKFRYGEDAAEAKQRMNHQVIGGREIRIVFAEENRKTPQEMRMTA 139


>gb|KJB72542.1| hypothetical protein B456_011G183900 [Gossypium raimondii]
          Length = 295

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFR GEDAAEAKQ++NHQVIGGREI IV+AEENRKTPQEMR TA
Sbjct: 88  EPRGFGFVKFRYGEDAAEAKQRMNHQVIGGREIRIVFAEENRKTPQEMRMTA 139


>ref|XP_012455872.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           [Gossypium raimondii] gi|763805603|gb|KJB72541.1|
           hypothetical protein B456_011G183900 [Gossypium
           raimondii]
          Length = 297

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFR GEDAAEAKQ++NHQVIGGREI IV+AEENRKTPQEMR TA
Sbjct: 88  EPRGFGFVKFRYGEDAAEAKQRMNHQVIGGREIRIVFAEENRKTPQEMRMTA 139


>ref|XP_009352184.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           isoform X2 [Pyrus x bretschneideri]
          Length = 251

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R GEDAAEAKQQLNH VIGGREI IV+AEENRKTPQEMRTT
Sbjct: 89  EPRGFGFVKYRYGEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRTT 139


>ref|XP_009352183.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           isoform X1 [Pyrus x bretschneideri]
          Length = 252

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R GEDAAEAKQQLNH VIGGREI IV+AEENRKTPQEMRTT
Sbjct: 89  EPRGFGFVKYRYGEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRTT 139


>ref|XP_008390759.1| PREDICTED: serine/arginine-rich splicing factor 33 isoform X2
           [Malus domestica]
          Length = 270

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R GEDAAEAKQQLNH VIGGREI IV+AEENRKTPQEMRTT
Sbjct: 89  EPRGFGFVKYRYGEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRTT 139


>ref|XP_008390758.1| PREDICTED: serine/arginine-rich splicing factor 33 isoform X1
           [Malus domestica]
          Length = 271

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R GEDAAEAKQQLNH VIGGREI IV+AEENRKTPQEMRTT
Sbjct: 89  EPRGFGFVKYRYGEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRTT 139


>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223543928|gb|EEF45454.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVK+R  EDAAEAKQ++NH++IGGREI IVYAEENRKTPQEMRTTA
Sbjct: 91  EPRGFGFVKYRYAEDAAEAKQRMNHKIIGGREIRIVYAEENRKTPQEMRTTA 142


>ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
          Length = 192

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R+GEDAAEAKQQLNH +IGGREI IV+AEENRKTPQEMR T
Sbjct: 87  EPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIRIVFAEENRKTPQEMRVT 137


>ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510620|gb|AES91762.1| RNA recognition motif
           [Medicago truncatula]
          Length = 314

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R+GEDAAEAKQQLNH +IGGREI IV+AEENRKTPQEMR T
Sbjct: 87  EPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIRIVFAEENRKTPQEMRVT 137


>ref|XP_008795098.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           [Phoenix dactylifera]
          Length = 229

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFR  EDAA AKQQ+NHQ+IGGREI+IV+AEENRKTPQEMRT+A
Sbjct: 88  EPRGFGFVKFRYAEDAAAAKQQMNHQIIGGREISIVFAEENRKTPQEMRTSA 139


>ref|XP_010904837.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           [Elaeis guineensis]
          Length = 229

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTTA 247
           EPRGFGFVKFR  EDAA AKQQ+NHQ+IGGREI+IV+AEENRKTPQEMRT A
Sbjct: 87  EPRGFGFVKFRYAEDAAAAKQQMNHQIIGGREISIVFAEENRKTPQEMRTNA 138


>ref|XP_009369081.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           isoform X2 [Pyrus x bretschneideri]
          Length = 272

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R GEDA EAKQQLNH VIGGREI IV+AEENRKTPQEMRTT
Sbjct: 89  EPRGFGFVKYRFGEDAVEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRTT 139


>ref|XP_009369080.1| PREDICTED: serine/arginine-rich SC35-like splicing factor SCL28
           isoform X1 [Pyrus x bretschneideri]
          Length = 273

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R GEDA EAKQQLNH VIGGREI IV+AEENRKTPQEMRTT
Sbjct: 89  EPRGFGFVKYRFGEDAVEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRTT 139


>ref|XP_008223085.1| PREDICTED: serine/arginine-rich splicing factor 33 isoform X3
           [Prunus mume]
          Length = 187

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = -3

Query: 402 EPRGFGFVKFRNGEDAAEAKQQLNHQVIGGREITIVYAEENRKTPQEMRTT 250
           EPRGFGFVK+R  EDAAEAKQQLNH VIGGREI IV+AEENRKTPQEMRTT
Sbjct: 89  EPRGFGFVKYRYAEDAAEAKQQLNHSVIGGREIRIVFAEENRKTPQEMRTT 139


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