BLASTX nr result
ID: Cinnamomum25_contig00005487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00005487
(588 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 178 1e-42
gb|KHG06283.1| DNA-directed RNA polymerase III subunit RPC6 [Gos... 176 9e-42
ref|XP_012482289.1| PREDICTED: DNA-directed RNA polymerase III s... 175 1e-41
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 173 5e-41
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 173 5e-41
ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III s... 173 5e-41
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 173 5e-41
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 173 5e-41
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6... 173 6e-41
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 172 8e-41
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 172 8e-41
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas... 172 8e-41
gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [... 171 2e-40
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 171 2e-40
ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III s... 171 3e-40
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun... 170 4e-40
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 169 9e-40
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s... 168 1e-39
ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III s... 168 1e-39
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 168 2e-39
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 178 bits (452), Expect = 1e-42
Identities = 89/165 (53%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ +K KHYMA EFE SKEITGG+WYVEG LD EF +V T+EG
Sbjct: 72 VVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLKVATLEG 131
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRL--- 235
+ D ++RSG FN E++ QI EI++ALVLDN + EVKS G FS +P+GKVCY +
Sbjct: 132 ITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCYKCVGKG 191
Query: 234 -TRRNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
T P ++SIPCGVCPRIS+CTP+GIISP CVY+ KWLDF
Sbjct: 192 STAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236
>gb|KHG06283.1| DNA-directed RNA polymerase III subunit RPC6 [Gossypium arboreum]
Length = 330
Score = 176 bits (445), Expect = 9e-42
Identities = 84/165 (50%), Positives = 110/165 (66%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++H + KHYM+ EFE S EITGG+WYVEG LD E+ +V T+EG
Sbjct: 166 VKNIHSRRQKHYMSAEFEPSNEITGGAWYVEGSLDKEYINVLKEQCWRKIYGLKVATLEG 225
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTRR 226
+ D ++RS E+S Q+ EI++ALVLDNE+ EV+STG G F+S+P+GK CY +R
Sbjct: 226 IADAIKRSNVSQIELSKQQVEEIVKALVLDNEVMEVRSTGTGEFASIPVGKACYKCAGKR 285
Query: 225 ----NPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P L+SIPCGVCP+IS CTP+GIISPI C Y+KKWL+F
Sbjct: 286 GYGGEPKLGALASIPCGVCPQISRCTPDGIISPITCEYYKKWLEF 330
>ref|XP_012482289.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Gossypium
raimondii] gi|763761578|gb|KJB28832.1| hypothetical
protein B456_005G071700 [Gossypium raimondii]
Length = 230
Score = 175 bits (444), Expect = 1e-41
Identities = 83/165 (50%), Positives = 110/165 (66%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++H + KHYM+ EFE S EITGG+WYVEG LD E+ +V T+EG
Sbjct: 66 VKNIHSRRQKHYMSAEFEPSNEITGGAWYVEGSLDKEYINVLKEQCWRKIYGLKVATLEG 125
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTRR 226
+ D ++RS E+S Q+ EI++ALVLDNE+ EV+STG G F+S+P+GK CY +R
Sbjct: 126 IADAIKRSNVSQIELSKQQVEEIVKALVLDNEVMEVRSTGTGEFASIPVGKACYKCAGKR 185
Query: 225 ----NPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P L+S+PCGVCP+IS CTP+GIISPI C Y+KKWL+F
Sbjct: 186 GYGGEPKLGALASVPCGVCPQISRCTPDGIISPITCEYYKKWLEF 230
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 173 bits (439), Expect = 5e-41
Identities = 87/167 (52%), Positives = 111/167 (66%), Gaps = 6/167 (3%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ K KHYMAVEFE SKE+TGG+WYVEG LD E+ +V T EG
Sbjct: 135 VVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEG 194
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTRR 226
+ + + ++G E S+ QI EIL+ALVLDNEI EV+S+G G FSS+P+G VCY R T +
Sbjct: 195 ISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY-RCTNK 253
Query: 225 N------PTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
PT ++SIPCGVCPRI++CTP+GIISP C Y+ KWLDF
Sbjct: 254 GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 300
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 173 bits (439), Expect = 5e-41
Identities = 87/167 (52%), Positives = 111/167 (66%), Gaps = 6/167 (3%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ K KHYMAVEFE SKE+TGG+WYVEG LD E+ +V T EG
Sbjct: 74 VVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKLKVATAEG 133
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTRR 226
+ + + ++G E S+ QI EIL+ALVLDNEI EV+S+G G FSS+P+G VCY R T +
Sbjct: 134 ISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY-RCTNK 192
Query: 225 N------PTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
PT ++SIPCGVCPRI++CTP+GIISP C Y+ KWLDF
Sbjct: 193 GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 173 bits (439), Expect = 5e-41
Identities = 87/167 (52%), Positives = 111/167 (66%), Gaps = 6/167 (3%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ K KHYMAVEFE SKE+TGG+WYVEG LD E+ +V T EG
Sbjct: 74 VVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEG 133
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTRR 226
+ + + ++G E S+ QI EIL+ALVLDNEI EV+S+G G FSS+P+G VCY R T +
Sbjct: 134 ISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY-RCTNK 192
Query: 225 N------PTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
PT ++SIPCGVCPRI++CTP+GIISP C Y+ KWLDF
Sbjct: 193 GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 173 bits (439), Expect = 5e-41
Identities = 84/165 (50%), Positives = 112/165 (67%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++H K KH MAVEFE SKEI+GG+WY EG LD EF +V T+EG
Sbjct: 69 VVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEG 128
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTR- 229
+ D ++RSG F +++ QI EI++ALVLDN+I EVKS G G F+++P+GKVCY +++
Sbjct: 129 ISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKG 188
Query: 228 ---RNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P T L+SIPCGVCP+I+ CTP+G+ISP CVY+ WLDF
Sbjct: 189 GGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLDF 233
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
gi|641825965|gb|KDO45213.1| hypothetical protein
CISIN_1g026766mg [Citrus sinensis]
gi|641825966|gb|KDO45214.1| hypothetical protein
CISIN_1g026766mg [Citrus sinensis]
Length = 233
Score = 173 bits (439), Expect = 5e-41
Identities = 84/165 (50%), Positives = 112/165 (67%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++H K KH MAVEFE SKEI+GG+WY EG LD EF +V T+EG
Sbjct: 69 VVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEG 128
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTR- 229
+ D ++RSG F +++ QI EI++ALVLDN+I EVKS G G F+++P+GKVCY +++
Sbjct: 129 ISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKG 188
Query: 228 ---RNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P T L+SIPCGVCP+I+ C P+G+ISP CVY+ KWLDF
Sbjct: 189 GGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLDF 233
>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|590615245|ref|XP_007023169.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 173 bits (438), Expect = 6e-41
Identities = 83/165 (50%), Positives = 112/165 (67%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ ++ KH+++ EFE S EITGG+WYVEG LD E+ +V T+EG
Sbjct: 73 VKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWRKIYGLKVATLEG 132
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTRR 226
+ D ++RS E+S QI EI++ALVLDNE+ EVKS+G G F+S+P+GKVCY + +R
Sbjct: 133 VTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASIPVGKVCYKCIGKR 192
Query: 225 ----NPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P ++SIPCGVCP+IS CTP+GIISP CVY+KKWLDF
Sbjct: 193 GYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLDF 237
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 172 bits (437), Expect = 8e-41
Identities = 82/165 (49%), Positives = 113/165 (68%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++H+K KH MAVEFE SKEI+GG+WY EG LD EF +V T+EG
Sbjct: 70 VVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEG 129
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTR- 229
+ D ++RSG F +++ QI EI++A+VLDN+I EVKS G G F+++P+GKVCY +++
Sbjct: 130 ISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKG 189
Query: 228 ---RNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P T +S+PCGVCP+I+ CTP+G+ISP CVY+ KWLDF
Sbjct: 190 GGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 172 bits (437), Expect = 8e-41
Identities = 82/165 (49%), Positives = 113/165 (68%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++H+K KH MAVEFE SKEI+GG+WY EG LD EF +V T+EG
Sbjct: 88 VVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEG 147
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTR- 229
+ D ++RSG F +++ QI EI++A+VLDN+I EVKS G G F+++P+GKVCY +++
Sbjct: 148 ISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKG 207
Query: 228 ---RNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P T +S+PCGVCP+I+ CTP+G+ISP CVY+ KWLDF
Sbjct: 208 GGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 252
>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
gi|561012478|gb|ESW11339.1| hypothetical protein
PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 172 bits (437), Expect = 8e-41
Identities = 86/165 (52%), Positives = 112/165 (67%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ +K KHYMA EFE SKEITGG WY +G LD +F +V T +G
Sbjct: 75 VVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKCIFRQKVATHDG 134
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLT-- 232
+ ++ R+SG F EV++ QI EIL+ALVLD+EIEEVKSTG G FSS+P+G++CY +
Sbjct: 135 VLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPVGRICYRCKSKG 194
Query: 231 --RRNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
R ++SIPCGVCPRI+ CTP+GIISP CVY++KWLDF
Sbjct: 195 GNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [Citrus sinensis]
Length = 234
Score = 171 bits (434), Expect = 2e-40
Identities = 81/165 (49%), Positives = 113/165 (68%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++H+K KH MAVEFE SK+I+GG+WY EG LD EF +V T+EG
Sbjct: 70 VVNIHNKGKKHLMAVEFEPSKDISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEG 129
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTR- 229
+ D ++RSG F +++ QI EI++A+VLDN+I EVKS G G F+++P+GKVCY +++
Sbjct: 130 ISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKG 189
Query: 228 ---RNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P T +S+PCGVCP+I+ CTP+G+ISP CVY+ KWLDF
Sbjct: 190 GGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402737|ref|XP_010654780.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402739|ref|XP_010654781.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 171 bits (434), Expect = 2e-40
Identities = 86/167 (51%), Positives = 111/167 (66%), Gaps = 6/167 (3%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ K KHYMAVEFE SKE+TGG+WYVEG LD E+ +V T EG
Sbjct: 74 VVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKLKVATAEG 133
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTRR 226
+ + + ++G E S+ QI EIL+ALVLDNEI EV+S+G G FSS+P+G VCY R T +
Sbjct: 134 ISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY-RCTNK 192
Query: 225 ------NPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P ++SIPCGVCPRI++CTP+GIISP +C Y+ KWLDF
Sbjct: 193 GGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239
>ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Prunus mume]
Length = 236
Score = 171 bits (432), Expect = 3e-40
Identities = 87/165 (52%), Positives = 104/165 (63%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V +V K KHYMA EFE SKE+TGG WY G LD + +V T+EG
Sbjct: 72 VVNVQSKGRKHYMASEFEPSKELTGGDWYSNGTLDKYYITCVKDGFAKIIYQLKVATLEG 131
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRL--- 235
+ D V++SG F + QI EIL+ LVLD I EVKSTG G F+S P+GKVCY
Sbjct: 132 ISDEVKKSGIFKTSFTRPQIEEILRVLVLDKRITEVKSTGMGEFASFPVGKVCYKSTSKG 191
Query: 234 -TRRNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
T+R P ++SIPCGVCPRIS+CTP+GIISP CVYF KWLDF
Sbjct: 192 GTKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236
>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
gi|462404542|gb|EMJ10006.1| hypothetical protein
PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 170 bits (431), Expect = 4e-40
Identities = 85/165 (51%), Positives = 103/165 (62%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V +V K KHYMA EFE SKE+TGG WY G LD + +V T+EG
Sbjct: 72 VVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQLKVATLEG 131
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTR- 229
+ D V++SG F + QI EIL+ LVLD + EVKSTG G F S P+GKVCY ++
Sbjct: 132 ISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVCYKSTSKG 191
Query: 228 ---RNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
R P ++SIPCGVCPRIS+CTP+GIISP CVYF KWLDF
Sbjct: 192 GSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max] gi|734354912|gb|KHN13797.1| DNA-directed
RNA polymerase III subunit RPC6 [Glycine soja]
Length = 239
Score = 169 bits (428), Expect = 9e-40
Identities = 85/165 (51%), Positives = 112/165 (67%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ +K KHYMA EFE SKEITGG WY +G+LD +F +V T +G
Sbjct: 75 VVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVATRDG 134
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLT-- 232
+ ++ R+SG FN EV++ QI EIL+ LVLD+EI EVKSTG G FSS+P+G++CY +
Sbjct: 135 VMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGRICYRCKSKG 194
Query: 231 --RRNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
R ++SIPCGVCPRI+ CTP+GIISP CVY++KWLDF
Sbjct: 195 GNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806633|ref|XP_010927733.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806635|ref|XP_010927734.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806637|ref|XP_010927735.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
Length = 237
Score = 168 bits (426), Expect = 1e-39
Identities = 83/160 (51%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++H+K K YMA+EFE SKEI+GGSWY +G LD EF ++ T+E
Sbjct: 74 VVNIHNKARKIYMAMEFEPSKEISGGSWYSDGSLDIEFIRILREQCLKHIERLQIATMEA 133
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLT-R 229
++ ++ S F E + QI+EI+ A+VLD EIEE+KSTG G FS +P GK+CY L R
Sbjct: 134 IYKSIQESRVFKVECTMQQIVEIVNAMVLDKEIEELKSTGIGDFSKVPSGKICYKSLKGR 193
Query: 228 RNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWL 109
P LSSIPCGVCPRI ECTP+GIISP CVY+ KWL
Sbjct: 194 EGPKIGALSSIPCGVCPRIGECTPDGIISPKTCVYYNKWL 233
>ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Jatropha
curcas] gi|317106726|dbj|BAJ53222.1| JHL06P13.1
[Jatropha curcas] gi|643729216|gb|KDP37096.1|
hypothetical protein JCGZ_06152 [Jatropha curcas]
Length = 235
Score = 168 bits (426), Expect = 1e-39
Identities = 82/164 (50%), Positives = 108/164 (65%), Gaps = 3/164 (1%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ +K K+YMA EFE SKEITGG+WYVEG LD F +V T+E
Sbjct: 72 VVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVATVEA 131
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRL--- 235
+ D++ R+G ++ QI EIL+ALVLDN++ EVKS G G F+S+P+GKVCY +
Sbjct: 132 VTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKSIGKG 191
Query: 234 TRRNPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
+ +P ++SIPCGVCPRI CTPNGIISP CVY+ KWL+F
Sbjct: 192 SSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLEF 235
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 168 bits (425), Expect = 2e-39
Identities = 83/165 (50%), Positives = 106/165 (64%), Gaps = 4/165 (2%)
Frame = -1
Query: 585 VNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVVTIEG 406
V ++ +K KH+MA EFE SKEI+GG+WY+EG LD EF V T+E
Sbjct: 127 VVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQIEKKGVATLEE 186
Query: 405 LFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHRLTRR 226
+ D + FN +V+ QI EIL+ L+LDN I EVKS G G F+S+P GKVCY +++
Sbjct: 187 VTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEFASIPFGKVCYRYISKG 246
Query: 225 ----NPTTSILSSIPCGVCPRISECTPNGIISPINCVYFKKWLDF 103
P L+SIPCGVCPRIS CTP+GIISP CVY++KWLDF
Sbjct: 247 ALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQKWLDF 291