BLASTX nr result
ID: Cinnamomum25_contig00005350
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00005350
(452 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010272363.1| PREDICTED: 30S ribosomal protein S20, chloro... 82 2e-13
ref|XP_004291502.1| PREDICTED: 30S ribosomal protein S20, chloro... 76 8e-12
ref|XP_008226494.1| PREDICTED: 30S ribosomal protein S20, chloro... 73 6e-11
ref|XP_007212118.1| hypothetical protein PRUPE_ppa012008mg [Prun... 73 8e-11
ref|XP_008801495.1| PREDICTED: 30S ribosomal protein S20, chloro... 72 1e-10
ref|XP_010917969.1| PREDICTED: 30S ribosomal protein S20, chloro... 72 2e-10
ref|XP_010917978.1| PREDICTED: 30S ribosomal protein S20, chloro... 67 6e-09
ref|XP_007021563.1| 30S ribosomal protein S20 isoform 1 [Theobro... 67 6e-09
ref|NP_188137.1| 30S ribosomal protein S20 [Arabidopsis thaliana... 67 6e-09
gb|KDO49243.1| hypothetical protein CISIN_1g029900mg [Citrus sin... 66 8e-09
ref|XP_006859051.2| PREDICTED: 30S ribosomal protein S20, chloro... 65 2e-08
ref|XP_008386206.1| PREDICTED: 30S ribosomal protein S20, chloro... 65 2e-08
ref|XP_012850696.1| PREDICTED: 30S ribosomal protein S20, chloro... 65 2e-08
ref|XP_006298594.1| hypothetical protein CARUB_v10014678mg [Caps... 65 2e-08
ref|XP_012441358.1| PREDICTED: 30S ribosomal protein S20, chloro... 65 2e-08
ref|XP_010487339.1| PREDICTED: 30S ribosomal protein S20, chloro... 65 2e-08
ref|XP_010465470.1| PREDICTED: 30S ribosomal protein S20, chloro... 65 2e-08
ref|XP_010502610.1| PREDICTED: 30S ribosomal protein S20, chloro... 65 2e-08
ref|XP_009387860.1| PREDICTED: 30S ribosomal protein S20, chloro... 65 2e-08
ref|XP_006451780.1| hypothetical protein CICLE_v10009636mg [Citr... 65 2e-08
>ref|XP_010272363.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Nelumbo
nucifera]
Length = 182
Score = 81.6 bits (200), Expect = 2e-13
Identities = 58/143 (40%), Positives = 70/143 (48%)
Frame = -3
Query: 429 LLHCPSSCFALPSKPKXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXTNLIQN 250
+LHC SSC LP KP+ +F NL +N
Sbjct: 3 VLHCISSCVVLPCKPRKFSITTSSLIQANPAPFRSLSFST---------------NLSKN 47
Query: 249 AFPKGGGFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKT 70
AF KG F++ IE+ RR VVCEA+ K K DS RIYNK++KSE+KT
Sbjct: 48 AFCKGS-FTVKPIERQTRRSVVCEASP---KKKADSAAKRARQAEKRRIYNKARKSEVKT 103
Query: 69 RMKKVFEALDVLVKKNGAEASEI 1
RMKKV EALDVL KK A+ EI
Sbjct: 104 RMKKVLEALDVLRKKADAQTEEI 126
>ref|XP_004291502.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Fragaria vesca
subsp. vesca]
Length = 186
Score = 76.3 bits (186), Expect = 8e-12
Identities = 63/148 (42%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = -3
Query: 438 MALLLHC-PSSCFALPSKPKXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXTN 262
MA LHC SSC ALPSK +F N
Sbjct: 1 MAAALHCLSSSCLALPSKFGNLSLNGPSTSSASSTHFPSLSFSA---------------N 45
Query: 261 LIQNAFPKGGGFSMMG-IEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKK 85
L + F KG F +G +++S+RR VVCEA P KKP DS RIYNKS+K
Sbjct: 46 LSHDFFSKG--FLNLGPVQRSVRRSVVCEAA-PTKKP--DSAEKRARQAEKRRIYNKSRK 100
Query: 84 SEIKTRMKKVFEALDVLVKKNGAEASEI 1
SEIKTRMKKV EALDVL KK A+A E+
Sbjct: 101 SEIKTRMKKVLEALDVLKKKPDAQAEEV 128
>ref|XP_008226494.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Prunus mume]
Length = 187
Score = 73.2 bits (178), Expect = 6e-11
Identities = 57/146 (39%), Positives = 66/146 (45%)
Frame = -3
Query: 438 MALLLHCPSSCFALPSKPKXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXTNL 259
MA +HC SSC ALPSK T +L
Sbjct: 1 MAAAVHCLSSCLALPSKLSNLSLNGPSTSSATHSTSTHFT------------SLSFSASL 48
Query: 258 IQNAFPKGGGFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSE 79
N F KG FS+ +++ RR VVCE T KPDS RIY+KS+KSE
Sbjct: 49 SHNFFSKGC-FSLSPVQRPTRRSVVCEVATT---KKPDSAEKRARQAEKRRIYHKSRKSE 104
Query: 78 IKTRMKKVFEALDVLVKKNGAEASEI 1
IKTRMKKV EALDVL KK A E+
Sbjct: 105 IKTRMKKVLEALDVLKKKPDATPEEV 130
>ref|XP_007212118.1| hypothetical protein PRUPE_ppa012008mg [Prunus persica]
gi|462407983|gb|EMJ13317.1| hypothetical protein
PRUPE_ppa012008mg [Prunus persica]
Length = 187
Score = 72.8 bits (177), Expect = 8e-11
Identities = 57/146 (39%), Positives = 66/146 (45%)
Frame = -3
Query: 438 MALLLHCPSSCFALPSKPKXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXTNL 259
MA +HC SSC ALPSK T +L
Sbjct: 1 MAAAVHCLSSCLALPSKLSNLSLNGPSTSSATHSTSTHFT------------SLSFSASL 48
Query: 258 IQNAFPKGGGFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSE 79
N F KG FS+ +++ RR VVCE T KPDS RIY+KS+KSE
Sbjct: 49 SHNFFSKGY-FSLSPVQRPTRRSVVCEVATT---KKPDSAEKRARQAEKRRIYHKSRKSE 104
Query: 78 IKTRMKKVFEALDVLVKKNGAEASEI 1
IKTRMKKV EALDVL KK A E+
Sbjct: 105 IKTRMKKVLEALDVLRKKPDATPEEV 130
>ref|XP_008801495.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Phoenix
dactylifera]
Length = 185
Score = 72.0 bits (175), Expect = 1e-10
Identities = 47/90 (52%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = -3
Query: 264 NLIQNAFPKGGGFSMMGIEK--SLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKS 91
NL AFP G ++ +E+ S RR +VCEA K K DS RIYNK+
Sbjct: 45 NLSLVAFPSGAN-TLTAVERPRSSRRSIVCEAAP---KKKADSAAKRARQAEKRRIYNKA 100
Query: 90 KKSEIKTRMKKVFEALDVLVKKNGAEASEI 1
+KSEIKTRMKKVFEALDVL KK A+A EI
Sbjct: 101 RKSEIKTRMKKVFEALDVLKKKTDAQAEEI 130
>ref|XP_010917969.1| PREDICTED: 30S ribosomal protein S20, chloroplastic isoform X1
[Elaeis guineensis]
Length = 185
Score = 71.6 bits (174), Expect = 2e-10
Identities = 47/90 (52%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = -3
Query: 264 NLIQNAFPKGGGFSMMGIEK--SLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKS 91
NL AFP+G ++ +E+ S RR VVCEA K K DS RIYNK+
Sbjct: 45 NLSLIAFPRGTN-ALTAVERPTSSRRSVVCEAAP---KKKADSAAKRARQAEKRRIYNKA 100
Query: 90 KKSEIKTRMKKVFEALDVLVKKNGAEASEI 1
+KSEIKTRMKKVFEALDV+ KK+ A+A EI
Sbjct: 101 RKSEIKTRMKKVFEALDVVKKKSDAQAEEI 130
>ref|XP_010917978.1| PREDICTED: 30S ribosomal protein S20, chloroplastic isoform X2
[Elaeis guineensis]
Length = 174
Score = 66.6 bits (161), Expect = 6e-09
Identities = 40/68 (58%), Positives = 45/68 (66%)
Frame = -3
Query: 204 SLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKVFEALDVLVKK 25
S RR VVCEA K K DS RIYNK++KSEIKTRMKKVFEALDV+ KK
Sbjct: 55 SSRRSVVCEAAP---KKKADSAAKRARQAEKRRIYNKARKSEIKTRMKKVFEALDVVKKK 111
Query: 24 NGAEASEI 1
+ A+A EI
Sbjct: 112 SDAQAEEI 119
>ref|XP_007021563.1| 30S ribosomal protein S20 isoform 1 [Theobroma cacao]
gi|508721191|gb|EOY13088.1| 30S ribosomal protein S20
isoform 1 [Theobroma cacao]
Length = 193
Score = 66.6 bits (161), Expect = 6e-09
Identities = 42/88 (47%), Positives = 50/88 (56%)
Frame = -3
Query: 264 NLIQNAFPKGGGFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKK 85
+L N F KG + +RR VVCEA K K DS RIYNK++K
Sbjct: 51 SLSHNFFSKGSLSISTMTQNPIRRTVVCEAAP---KKKADSAAKRARQAEKRRIYNKARK 107
Query: 84 SEIKTRMKKVFEALDVLVKKNGAEASEI 1
SE++TRMKKV EALDVL KK A+A EI
Sbjct: 108 SEVRTRMKKVLEALDVLRKKPDAQAEEI 135
>ref|NP_188137.1| 30S ribosomal protein S20 [Arabidopsis thaliana]
gi|75308015|sp|Q9ASV6.1|RR20_ARATH RecName: Full=30S
ribosomal protein S20, chloroplastic; Flags: Precursor
gi|188036221|pdb|3BBN|T Chain T, Homology Model For The
Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome.
gi|13605653|gb|AAK32820.1|AF361807_1 AT3g15190/F4B12_10
[Arabidopsis thaliana]
gi|13899121|gb|AAK48982.1|AF370555_1 Unknown protein
[Arabidopsis thaliana] gi|15777889|gb|AAL05905.1|
AT3g15190/F4B12_10 [Arabidopsis thaliana]
gi|18377542|gb|AAL66937.1| unknown protein [Arabidopsis
thaliana] gi|21592469|gb|AAM64420.1| 30S ribosomal
protein S20 [Arabidopsis thaliana]
gi|332642109|gb|AEE75630.1| 30S ribosomal protein S20
[Arabidopsis thaliana]
Length = 202
Score = 66.6 bits (161), Expect = 6e-09
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = -3
Query: 213 IEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKVFEALDVL 34
++K +R+L+VCEA P KK DS R+YNKSKKSE +TRMKKV EAL+ L
Sbjct: 68 VQKPMRQLIVCEAAAPTKKA--DSAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALEGL 125
Query: 33 VKKNGAEASEI 1
KK A+A EI
Sbjct: 126 KKKTDAQADEI 136
>gb|KDO49243.1| hypothetical protein CISIN_1g029900mg [Citrus sinensis]
Length = 185
Score = 66.2 bits (160), Expect = 8e-09
Identities = 39/78 (50%), Positives = 47/78 (60%)
Frame = -3
Query: 234 GGFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKV 55
G +M I++ +R VVCEA T K K DS RIYNKS+KSE+KTRMKKV
Sbjct: 53 GSLTMSPIQRPMRHSVVCEAAT---KKKADSAAKRARQAEKRRIYNKSRKSEVKTRMKKV 109
Query: 54 FEALDVLVKKNGAEASEI 1
EALD L KK A+ E+
Sbjct: 110 LEALDGLRKKPDAQPEEV 127
>ref|XP_006859051.2| PREDICTED: 30S ribosomal protein S20, chloroplastic [Amborella
trichopoda]
Length = 176
Score = 65.1 bits (157), Expect = 2e-08
Identities = 43/88 (48%), Positives = 55/88 (62%)
Frame = -3
Query: 264 NLIQNAFPKGGGFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKK 85
N+ +N +G + I+ + R+ +VCEAT+ GKKP DS RI NKS+K
Sbjct: 37 NICENGIIRGD-HTYGAIKMAPRKSIVCEATS-GKKP--DSAEKRARQAEKRRIRNKSRK 92
Query: 84 SEIKTRMKKVFEALDVLVKKNGAEASEI 1
SEIKTRMKKVF+ALD L KK A+A EI
Sbjct: 93 SEIKTRMKKVFDALDELKKKTEAQADEI 120
>ref|XP_008386206.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Malus
domestica]
Length = 184
Score = 65.1 bits (157), Expect = 2e-08
Identities = 50/146 (34%), Positives = 64/146 (43%)
Frame = -3
Query: 438 MALLLHCPSSCFALPSKPKXXXXXXXXXXXXXXXXXXXXTFXXXXXXXXXXXXXXXXTNL 259
M+ +HC S C +LPS+ +F L
Sbjct: 1 MSAAIHCLSPCLSLPSRFSKLSLNGPSTSSATTHSTTSLSFSA---------------TL 45
Query: 258 IQNAFPKGGGFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSE 79
N F KG ++ +++ +R +VCE TT KPDS RIYNKS+KSE
Sbjct: 46 SPNFFSKGY-LAVSPLQRPVRHSIVCEVTTK----KPDSAVKRARQAEKRRIYNKSRKSE 100
Query: 78 IKTRMKKVFEALDVLVKKNGAEASEI 1
IKTRMKKV EALD L KK A E+
Sbjct: 101 IKTRMKKVLEALDGLKKKPDAAPEEV 126
>ref|XP_012850696.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Erythranthe
guttatus] gi|604312869|gb|EYU26363.1| hypothetical
protein MIMGU_mgv1a014578mg [Erythranthe guttata]
Length = 185
Score = 65.1 bits (157), Expect = 2e-08
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = -3
Query: 198 RRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKVFEALDVLVKKNG 19
RR +VCEA T KPDS R+YNK+KKSE++TRMKKV EAL+VLVKK+
Sbjct: 63 RRSIVCEAVTT---KKPDSAAKRARQSEKRRVYNKAKKSEVRTRMKKVLEALEVLVKKSD 119
Query: 18 AEASEI 1
A+ E+
Sbjct: 120 AQPEEV 125
>ref|XP_006298594.1| hypothetical protein CARUB_v10014678mg [Capsella rubella]
gi|482567303|gb|EOA31492.1| hypothetical protein
CARUB_v10014678mg [Capsella rubella]
Length = 200
Score = 65.1 bits (157), Expect = 2e-08
Identities = 38/70 (54%), Positives = 45/70 (64%)
Frame = -3
Query: 210 EKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKVFEALDVLV 31
+K +R+L+VCEAT P KK DS RIYNKSKKSE +TRMKKV EAL+ L
Sbjct: 69 QKPMRQLIVCEATAPTKKA--DSAAKRARQAEKRRIYNKSKKSEARTRMKKVLEALEGLK 126
Query: 30 KKNGAEASEI 1
KK A+ EI
Sbjct: 127 KKADAQPDEI 136
>ref|XP_012441358.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Gossypium
raimondii] gi|763794712|gb|KJB61708.1| hypothetical
protein B456_009G375600 [Gossypium raimondii]
Length = 188
Score = 64.7 bits (156), Expect = 2e-08
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = -3
Query: 264 NLIQNAFPKGG-GFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSK 88
NL N F KG FS + + R +VVCEA K K DS R+Y+K+K
Sbjct: 45 NLSHNLFSKGNLSFSTVTPKPIHRSVVVCEAAP---KKKADSAAKRARQAEKRRVYHKAK 101
Query: 87 KSEIKTRMKKVFEALDVLVKKNGAEASEI 1
KSE+KTRM+KV EALDVL KK A A EI
Sbjct: 102 KSEVKTRMRKVLEALDVLRKKPDAAAEEI 130
>ref|XP_010487339.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Camelina
sativa]
Length = 202
Score = 64.7 bits (156), Expect = 2e-08
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = -3
Query: 213 IEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKVFEALDVL 34
++K R+L+VCEAT P KK DS R+YNKSKKSE +TRMKKV EAL+ L
Sbjct: 68 VQKPTRQLIVCEATAPTKKA--DSAAKRARQAEKRRLYNKSKKSEARTRMKKVLEALEGL 125
Query: 33 VKKNGAEASEI 1
KK A+ EI
Sbjct: 126 KKKTEAQPDEI 136
>ref|XP_010465470.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Camelina
sativa]
Length = 200
Score = 64.7 bits (156), Expect = 2e-08
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = -3
Query: 213 IEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKVFEALDVL 34
++K R+L+VCEAT P KK DS R+YNKSKKSE +TRMKKV EAL+ L
Sbjct: 66 VQKPTRQLIVCEATAPTKKA--DSAAKRARQAEKRRLYNKSKKSEARTRMKKVLEALEGL 123
Query: 33 VKKNGAEASEI 1
KK A+ EI
Sbjct: 124 KKKTEAQPDEI 134
>ref|XP_010502610.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Camelina
sativa]
Length = 203
Score = 64.7 bits (156), Expect = 2e-08
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = -3
Query: 213 IEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKVFEALDVL 34
++K R+L+VCEAT P KK DS R+YNKSKKSE +TRMKKV EAL+ L
Sbjct: 68 VQKPTRQLIVCEATAPTKKA--DSAAKRARQAEKRRLYNKSKKSEARTRMKKVLEALEGL 125
Query: 33 VKKNGAEASEI 1
KK A+ EI
Sbjct: 126 KKKTEAQPDEI 136
>ref|XP_009387860.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Musa acuminata
subsp. malaccensis]
Length = 193
Score = 64.7 bits (156), Expect = 2e-08
Identities = 48/93 (51%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Frame = -3
Query: 264 NLIQNAFPKGGGFSMMGIEKS----LRR-LVVCEATTPGKKPKPDSXXXXXXXXXXXRIY 100
+L AFP G GF + +EK LRR VVCEA K DS RIY
Sbjct: 50 SLSLTAFPTGVGF-LRPVEKPRAPPLRRPAVVCEAAPK----KYDSASKRTRQAERRRIY 104
Query: 99 NKSKKSEIKTRMKKVFEALDVLVKKNGAEASEI 1
NK++KSEIKTRMKKV EALDVL KK+ A+A EI
Sbjct: 105 NKARKSEIKTRMKKVLEALDVLRKKSDAQAEEI 137
>ref|XP_006451780.1| hypothetical protein CICLE_v10009636mg [Citrus clementina]
gi|568820617|ref|XP_006464806.1| PREDICTED: 30S
ribosomal protein S20, chloroplastic-like [Citrus
sinensis] gi|557555006|gb|ESR65020.1| hypothetical
protein CICLE_v10009636mg [Citrus clementina]
Length = 185
Score = 64.7 bits (156), Expect = 2e-08
Identities = 38/78 (48%), Positives = 47/78 (60%)
Frame = -3
Query: 234 GGFSMMGIEKSLRRLVVCEATTPGKKPKPDSXXXXXXXXXXXRIYNKSKKSEIKTRMKKV 55
G +M I++ +R VVC+A T K K DS RIYNKS+KSE+KTRMKKV
Sbjct: 53 GSLTMSPIQRPMRHSVVCKAAT---KKKADSAAKRARQAEKRRIYNKSRKSEVKTRMKKV 109
Query: 54 FEALDVLVKKNGAEASEI 1
EALD L KK A+ E+
Sbjct: 110 LEALDGLRKKPDAQPEEV 127