BLASTX nr result

ID: Cinnamomum25_contig00005259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00005259
         (413 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010922880.1| PREDICTED: zinc finger protein VAR3, chlorop...    69   9e-10
ref|XP_009410474.1| PREDICTED: zinc finger protein VAR3, chlorop...    57   4e-06

>ref|XP_010922880.1| PREDICTED: zinc finger protein VAR3, chloroplastic [Elaeis
            guineensis]
          Length = 903

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 51/136 (37%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
 Frame = -3

Query: 411  NSSNXXXXXXXXPDYFAKKDKQPENGVPTEKGSSETLFPEK---VPDMPKNSET--SNIG 247
            N+SN        PDYFAKKDKQPE+    E  S     PEK   VP+  + +ET  SN G
Sbjct: 654  NNSNFVPFVPFPPDYFAKKDKQPEDSQTVESTSEGAAPPEKGQIVPEKLEEAETRVSNFG 713

Query: 246  SVNFDNQ----QTNTDQRSVGFPANNLNENKVDAAYRGPAVNSAQKSNNLRTNPGVSSSS 79
            S    +Q    Q N +  S        NE+KVDA Y G    SAQ  NN   N     +S
Sbjct: 714  SAGNTSQWPDSQPNNESHSTDLSGKTYNESKVDAGYGGATATSAQLPNNTWNNSKEGGNS 773

Query: 78   GLYGKEHTVGSSTQQS 31
                K    G+S+  S
Sbjct: 774  EYTQKSAFDGASSTAS 789


>ref|XP_009410474.1| PREDICTED: zinc finger protein VAR3, chloroplastic [Musa acuminata
            subsp. malaccensis]
          Length = 901

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 50/145 (34%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
 Frame = -3

Query: 411  NSSNXXXXXXXXPDYFAKKDKQPENGVPT------EKGSSETLFPEKVPDMPKNSETSNI 250
            NS N        PDYFAKKDKQPE   PT      EK  SET   E+      NSE+   
Sbjct: 654  NSGNFVPFVPFPPDYFAKKDKQPETS-PTEGSTLHEKARSETEKSEESMTGVANSESGGN 712

Query: 249  GSVNFDNQQTNTDQR---SVGFPANNLNENKVDAAYRGPAVNSAQKSNNLRTNPGVSSSS 79
             +   +N   N       S   P+ +L   K+DA   G + NSAQ  N    N     S+
Sbjct: 713  ATRQLENWSANQSDHGTTSTNPPSMDLTYRKMDAYNVGGSANSAQPLNTSWRNQSEIPSN 772

Query: 78   GLYGKE----HTVGSSTQQSENTQN 16
                K      +V +STQQ+EN+++
Sbjct: 773  DFSQKNTYSGPSVSASTQQTENSKS 797


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