BLASTX nr result
ID: Cinnamomum25_contig00000394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00000394
(240 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010248759.1| PREDICTED: photosystem II core complex prote... 72 2e-10
ref|XP_002285325.1| PREDICTED: photosystem II core complex prote... 66 1e-08
ref|XP_002315645.1| Photosystem II core complex proteins psbY [P... 63 9e-08
ref|XP_011042352.1| PREDICTED: photosystem II core complex prote... 62 1e-07
gb|ABD35812.1| putative chloroplast PsbY protein [Populus x cana... 59 1e-06
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides] 59 1e-06
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides] 59 1e-06
ref|XP_012467461.1| PREDICTED: photosystem II core complex prote... 59 2e-06
ref|XP_010933748.1| PREDICTED: photosystem II core complex prote... 58 3e-06
ref|XP_010919400.1| PREDICTED: photosystem II core complex prote... 58 3e-06
ref|XP_007044927.1| Photosystem II core complex proteins psbY [T... 57 4e-06
>ref|XP_010248759.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Nelumbo nucifera]
Length = 201
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLDNVNTSS 10
LN KCLS SPN++ PSKP++KP+SLLSLQNLPKGLT KS D++N SS
Sbjct: 11 LNAKCLSLKSPNNLNPSKPSVKPLSLLSLQNLPKGLTTFKSSDSLNLSS 59
>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
[Vitis vinifera]
Length = 201
Score = 65.9 bits (159), Expect = 1e-08
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLDNVNTSS 10
LN KCLS NSP ++ SKPT KPISLLS+QNLPKGLT KS +N N S+
Sbjct: 11 LNAKCLSINSPKNLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLST 59
>ref|XP_002315645.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
x Populus deltoides] gi|222864685|gb|EEF01816.1|
Photosystem II core complex proteins psbY [Populus
trichocarpa]
Length = 196
Score = 62.8 bits (151), Expect = 9e-08
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLDN 25
LN KCLS NS ++ P+KP+ KP+SLLS+QNLPKGLT SK DN
Sbjct: 11 LNAKCLSINSNKNISPTKPSTKPVSLLSMQNLPKGLTISKPADN 54
>ref|XP_011042352.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Populus euphratica]
Length = 196
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLDN 25
LN KCLS NS ++ P+KP+ KP+SLLS+QNLPKGLT SK DN
Sbjct: 11 LNAKCLSINSNKNINPTKPSTKPVSLLSMQNLPKGLTISKPADN 54
>gb|ABD35812.1| putative chloroplast PsbY protein [Populus x canadensis]
Length = 59
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLDN 25
LN KCLS NS ++ P KP+ KP+SLLS+ NLPKGLT SK DN
Sbjct: 11 LNAKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADN 54
>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 196
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLDN 25
LN KCLS NS ++ P KP+ KP+SLLS+ NLPKGLT SK DN
Sbjct: 11 LNAKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADN 54
>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 196
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLDN 25
LN KCLS NS ++ P KP+ KP+SLLS+ NLPKGLT SK DN
Sbjct: 11 LNAKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADN 54
>ref|XP_012467461.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
[Gossypium raimondii] gi|763748231|gb|KJB15670.1|
hypothetical protein B456_002G190000 [Gossypium
raimondii]
Length = 201
Score = 58.5 bits (140), Expect = 2e-06
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLDNVN-TSSLFG 1
LN KCLS +S P+KPT KP SLLS+QNLPKGLT SK +N N SSL G
Sbjct: 11 LNAKCLSISSTKMSSPTKPTPKPFSLLSMQNLPKGLTISKPANNSNLPSSLAG 63
>ref|XP_010933748.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Elaeis guineensis]
Length = 203
Score = 57.8 bits (138), Expect = 3e-06
Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Frame = -1
Query: 156 LNLKCLSTNSP-NHVIPSKPTI-KPISLLSLQNLPKGLTPSKSLDNVNTSS 10
L+ KCLS NSP NH+ P+KPT+ KPISLLSLQ LPKGLT K + SS
Sbjct: 10 LHAKCLSINSPSNHLNPAKPTVRKPISLLSLQTLPKGLTTCKPITTPGPSS 60
>ref|XP_010919400.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like, partial [Elaeis guineensis]
Length = 229
Score = 57.8 bits (138), Expect = 3e-06
Identities = 31/42 (73%), Positives = 35/42 (83%), Gaps = 2/42 (4%)
Frame = -1
Query: 156 LNLKCLSTNSP-NHVIPSKPTI-KPISLLSLQNLPKGLTPSK 37
L+ KCLS NSP NH PSKPT+ KPISL+SLQNLPKGL+ SK
Sbjct: 10 LHAKCLSINSPPNHFNPSKPTLTKPISLISLQNLPKGLSSSK 51
>ref|XP_007044927.1| Photosystem II core complex proteins psbY [Theobroma cacao]
gi|508708862|gb|EOY00759.1| Photosystem II core complex
proteins psbY [Theobroma cacao]
Length = 201
Score = 57.4 bits (137), Expect = 4e-06
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -1
Query: 156 LNLKCLSTNSPNHVIPSKPTIKPISLLSLQNLPKGLTPSKSLD-NVNTSSLFG 1
LN KCLS +S + P+KP+ KPISLLS+QNLPKGLT SK + ++ SSL G
Sbjct: 11 LNAKCLSISSNKTINPTKPSAKPISLLSMQNLPKGLTISKPAEKSILPSSLAG 63