BLASTX nr result

ID: Cinnamomum24_contig00037387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00037387
         (359 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protei...    62   2e-07

>gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protein [Picrorhiza
           kurrooa]
          Length = 102

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -1

Query: 227 RSSLHQTTPTTGCSRRVFMVKASKD-EKVVMGTKEEDNSTRRDLMFXXXXXXXXXXXXXX 51
           RS+  +  PTTG    V MV+ASK+ EK+ +  KEE N+TRRDLMF              
Sbjct: 13  RSAAAKQLPTTGRGG-VAMVRASKESEKLTVNVKEESNNTRRDLMFAMAAVVASSIANFA 71

Query: 50  XADEPKRGSAEAKKKY 3
            ADEPKRG+ EAKKKY
Sbjct: 72  MADEPKRGTVEAKKKY 87


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