BLASTX nr result
ID: Cinnamomum24_contig00036976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00036976
(477 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430... 45 5e-07
ref|XP_008358855.1| PREDICTED: uncharacterized protein LOC103422... 45 3e-06
ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438... 45 3e-06
ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein A... 44 4e-06
ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433... 44 6e-06
ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein A... 44 6e-06
ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein A... 44 1e-05
>ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430323 [Malus domestica]
Length = 1380
Score = 45.1 bits (105), Expect(2) = 5e-07
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 430 STIWKKLRALSC*LQRESKWVVGNGKLIGIWFDNWIDKVSIA-SKFPSFQFSESALVANI 254
S+ W L+ L S+W++G+G+ + WFD W+D+ I+ S F V+++
Sbjct: 910 SSXWHGLKRALPILNNNSRWIIGDGRXVSFWFDKWLDEPIISXSLFSVISPKVLPRVSDV 969
Query: 253 TSENAWQIP 227
+W +P
Sbjct: 970 IEAQSWSLP 978
Score = 35.0 bits (79), Expect(2) = 5e-07
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 122 SDAWNLPRSRDSAKSWPVLICYKFINPRIACFSWRLMHRK 3
S ++L R R S +W +I FI PR++ +WRL H K
Sbjct: 1019 SSGYHLIRXRHSDCAWAKVIWQHFIPPRLSILAWRLFHDK 1058
>ref|XP_008358855.1| PREDICTED: uncharacterized protein LOC103422573 [Malus domestica]
Length = 1419
Score = 44.7 bits (104), Expect(2) = 3e-06
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 430 STIWKKLRALSC*LQRESKWVVGNGKLIGIWFDNWIDK--VSIASKFPSFQFSESALVAN 257
S+IW ++++ L + +WV+GNG +W D W+DK V + V+N
Sbjct: 910 SSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATXIAPSXSRTKVSN 969
Query: 256 ITSENAWQIPT 224
I W IP+
Sbjct: 970 IIXMGXWVIPS 980
Score = 33.1 bits (74), Expect(2) = 3e-06
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 122 SDAWNLPRSRDSAKSWPVLICYKFINPRIACFSWRLMHRK 3
SD + + R R KSW +I FI PR + W+++ K
Sbjct: 1020 SDGYEIVRHRFPVKSWASIIWXPFIPPRYSILVWKILFNK 1059
>ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438319 [Malus domestica]
Length = 1384
Score = 44.7 bits (104), Expect(2) = 3e-06
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = -3
Query: 430 STIWKKLRALSC*LQRESKWVVGNGKLIGIWFDNWIDK-----VSIASKFPSFQFSESAL 266
S+IW ++++ L + +WV+GNG +W D W+DK V PS ++
Sbjct: 910 SSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSCTK--- 966
Query: 265 VANITSENAWQIPT 224
V+NI W IP+
Sbjct: 967 VSNIIRMGKWVIPS 980
Score = 32.7 bits (73), Expect(2) = 3e-06
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 122 SDAWNLPRSRDSAKSWPVLICYKFINPRIACFSWRLMHRK 3
SD + + R R KSW +I FI PR + W+++ K
Sbjct: 1020 SDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNK 1059
>ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 805
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 430 STIWKKLRALSC*LQRESKWVVGNGKLIGIWFDNWIDK--VSIASKFPSFQFSESALVAN 257
S+IW ++++ L + +WV+GNG +W D W+DK V + V+N
Sbjct: 331 SSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSRTKVSN 390
Query: 256 ITSENAWQIPT 224
I W IP+
Sbjct: 391 IIXMGQWVIPS 401
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 122 SDAWNLPRSRDSAKSWPVLICYKFINPRIACFSWRLMHRK 3
SD + + R R KSW +I FI PR + W+++ K
Sbjct: 441 SDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNK 480
>ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433498 [Malus domestica]
Length = 1384
Score = 43.9 bits (102), Expect(2) = 6e-06
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 430 STIWKKLRALSC*LQRESKWVVGNGKLIGIWFDNWIDK--VSIASKFPSFQFSESALVAN 257
S+IW ++++ L + +WV+GNG +W D W+DK V + V+N
Sbjct: 910 SSIWPGIKSIJHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAXSLSRTKVSN 969
Query: 256 ITSENAWQIP 227
I W IP
Sbjct: 970 IIRMGXWVIP 979
Score = 32.7 bits (73), Expect(2) = 6e-06
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 122 SDAWNLPRSRDSAKSWPVLICYKFINPRIACFSWRLMHRK 3
SD + + R R KSW +I FI PR + W+++ K
Sbjct: 1020 SDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNK 1059
>ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 577
Score = 43.9 bits (102), Expect(2) = 6e-06
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 430 STIWKKLRALSC*LQRESKWVVGNGKLIGIWFDNWIDK--VSIASKFPSFQFSESALVAN 257
S+IW ++++ L + +WV+GNG +W D W+DK V + V+N
Sbjct: 103 SSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVXGATEIAXSLSRTKVSN 162
Query: 256 ITSENAWQIPT 224
I W IP+
Sbjct: 163 IIRMGXWVIPS 173
Score = 32.7 bits (73), Expect(2) = 6e-06
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 122 SDAWNLPRSRDSAKSWPVLICYKFINPRIACFSWRLMHRK 3
SD + + R R KSW +I FI PR + W+++ K
Sbjct: 213 SDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNK 252
>ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 591
Score = 44.3 bits (103), Expect(2) = 1e-05
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 430 STIWKKLRALSC*LQRESKWVVGNGKLIGIWFDNWIDK--VSIASKFPSFQFSESALVAN 257
S+IW ++++ L + +WV+GNG +W D W+DK V + V+N
Sbjct: 117 SSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSRTKVSN 176
Query: 256 ITSENAWQIPT 224
I W IP+
Sbjct: 177 IIRMGQWVIPS 187
Score = 31.6 bits (70), Expect(2) = 1e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 122 SDAWNLPRSRDSAKSWPVLICYKFINPRIACFSWRLMHRK 3
SD + + R R KSW +I FI PR + W ++ K
Sbjct: 227 SDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWXILFNK 266