BLASTX nr result
ID: Cinnamomum24_contig00034681
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00034681
(247 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polyme... 119 7e-25
ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polyme... 119 1e-24
ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polyme... 117 3e-24
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 117 3e-24
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 116 6e-24
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de... 116 7e-24
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 116 7e-24
ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polyme... 114 2e-23
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 114 2e-23
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo... 114 3e-23
ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polyme... 114 3e-23
sp|Q0DXS3.2|RDR1_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 114 3e-23
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 114 3e-23
gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indi... 114 3e-23
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola... 114 3e-23
gb|KQK02024.1| hypothetical protein BRADI_3g59910 [Brachypodium ... 114 4e-23
ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 114 4e-23
ref|XP_010043971.1| PREDICTED: probable RNA-dependent RNA polyme... 113 5e-23
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 113 5e-23
gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops... 113 5e-23
>ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis] gi|697138603|ref|XP_009623378.1|
PREDICTED: probable RNA-dependent RNA polymerase 1
[Nicotiana tomentosiformis]
gi|697138605|ref|XP_009623379.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis] gi|697138607|ref|XP_009623380.1|
PREDICTED: probable RNA-dependent RNA polymerase 1
[Nicotiana tomentosiformis]
Length = 1116
Score = 119 bits (299), Expect = 7e-25
Identities = 54/82 (65%), Positives = 69/82 (84%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPTT LDHDV IEEV EYF ++V +S+G+I+NAH+V++D+EP MA SDPCK
Sbjct: 823 VQPMDYTPAPTTQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCK 882
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
+LA+ FSIAVD+ KTGVPAE P
Sbjct: 883 QLAQLFSIAVDFPKTGVPAEIP 904
>ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris] gi|698458664|ref|XP_009781108.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris] gi|698458668|ref|XP_009781109.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris]
Length = 1116
Score = 119 bits (297), Expect = 1e-24
Identities = 53/82 (64%), Positives = 69/82 (84%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAP+T LDHDV IEEV EYF ++V +S+G+I+NAH+V++D+EP MA SDPCK
Sbjct: 823 VQPMDYTPAPSTQLDHDVTIEEVQEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCK 882
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
+LA+ FSIAVD+ KTGVPAE P
Sbjct: 883 QLAQLFSIAVDFPKTGVPAEIP 904
>ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Erythranthe
guttatus] gi|848895047|ref|XP_012847563.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Erythranthe
guttatus] gi|604316686|gb|EYU28878.1| hypothetical
protein MIMGU_mgv1a000505mg [Erythranthe guttata]
Length = 1110
Score = 117 bits (294), Expect = 3e-24
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPTT LDHDV IEEV +YF ++V +S+G+I+NAH V++DKEPLMA S+PC
Sbjct: 820 VEPMDYNPAPTTRLDHDVTIEEVEDYFTNYIVNDSLGIIANAHTVFADKEPLMALSEPCL 879
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
ELA+ FSIAVD+ KTG+PAE P
Sbjct: 880 ELARLFSIAVDFNKTGIPAEIP 901
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 117 bits (293), Expect = 3e-24
Identities = 53/80 (66%), Positives = 68/80 (85%)
Frame = -1
Query: 241 PMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCKEL 62
PM+Y PAP+T LDHDV IEEV EYF ++V +S+G+I+NAH+V++D+EP MA SDPCK+L
Sbjct: 826 PMDYTPAPSTQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQL 885
Query: 61 AKQFSIAVDYAKTGVPAEFP 2
A+ FSIAVD+ KTGVPAE P
Sbjct: 886 AQLFSIAVDFPKTGVPAEIP 905
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 116 bits (291), Expect = 6e-24
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Frame = -1
Query: 247 IPP-----MEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAE 83
IPP M+Y PAPTT LDHDV IEEV EYF +++ +S+G+I+NAH+V++D+EP MA
Sbjct: 818 IPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFTNYIINDSLGIIANAHVVFADREPDMAM 877
Query: 82 SDPCKELAKQFSIAVDYAKTGVPAEFP 2
SDPCK+LA+ FSIAVD+ KTGVPAE P
Sbjct: 878 SDPCKQLAQLFSIAVDFPKTGVPAEIP 904
>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1139
Score = 116 bits (290), Expect = 7e-24
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PMEY PAP+ LDHDV IEEV EYF ++V +S+G+I+NAH+V++D+EP MA SDPCK
Sbjct: 846 VQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCK 905
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
+LA+ FSIAVD+ KTGVPAE P
Sbjct: 906 KLAELFSIAVDFPKTGVPAEIP 927
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 116 bits (290), Expect = 7e-24
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PMEY PAP+ LDHDV IEEV EYF ++V +S+G+I+NAH+V++D+EP MA SDPCK
Sbjct: 821 VQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCK 880
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
+LA+ FSIAVD+ KTGVPAE P
Sbjct: 881 KLAELFSIAVDFPKTGVPAEIP 902
>ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica]
gi|657979585|ref|XP_008381761.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Malus domestica]
Length = 1114
Score = 114 bits (286), Expect = 2e-23
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
I PM+Y PAP+ LDHDV +EEV EYF +M+ +S+G+I+NAH V++DK+PL A S+PCK
Sbjct: 816 IQPMDYTPAPSMELDHDVTMEEVEEYFVNYMINDSLGIIANAHTVFADKDPLKAMSEPCK 875
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
ELAK FSIAVD+ KTGVPA P
Sbjct: 876 ELAKLFSIAVDFPKTGVPAVIP 897
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 114 bits (286), Expect = 2e-23
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAP+ LDHDV IEEV EYF +MV + +GVI+NAH+V++D+EP MA SDPC
Sbjct: 514 VQPMDYTPAPSIQLDHDVTIEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCI 573
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
ELA+ FSIAVD+ KTGVPAE P
Sbjct: 574 ELAQLFSIAVDFPKTGVPAEIP 595
>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
Length = 1027
Score = 114 bits (285), Expect = 3e-23
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPT TLDHDV IEEV EYF ++V S+G+I+NAH+V++DKE L AES PC
Sbjct: 736 VTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCI 795
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
ELAK FSIAVD+ KTGVPA P
Sbjct: 796 ELAKLFSIAVDFPKTGVPALIP 817
>ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Oryza
brachyantha]
Length = 1113
Score = 114 bits (285), Expect = 3e-23
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPT TLDHDV IEEV EYF ++V S+G+I+NAH+V++DKE L AES PC
Sbjct: 821 VAPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGIIANAHVVFADKEDLKAESSPCI 880
Query: 67 ELAKQFSIAVDYAKTGVPAE 8
ELAK FSIAVD+ KTGVPA+
Sbjct: 881 ELAKLFSIAVDFPKTGVPAQ 900
>sp|Q0DXS3.2|RDR1_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 1; Short=OsRDR1
gi|937905751|dbj|BAS80805.1| Os02g0736200 [Oryza sativa
Japonica Group]
Length = 740
Score = 114 bits (285), Expect = 3e-23
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPT TLDHDV IEEV EYF ++V S+G+I+NAH+V++DKE L AES PC
Sbjct: 449 VTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCI 508
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
ELAK FSIAVD+ KTGVPA P
Sbjct: 509 ELAKLFSIAVDFPKTGVPALIP 530
>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1065
Score = 114 bits (285), Expect = 3e-23
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PMEY PAP+ LDHDV IEEV EYF ++V +S+G+ISNAH+V++D+EP MA SDPCK
Sbjct: 820 VQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCK 879
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
+LA+ SIAVD+ KTGVPAE P
Sbjct: 880 KLAELCSIAVDFPKTGVPAEIP 901
>gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indica Group]
Length = 1067
Score = 114 bits (285), Expect = 3e-23
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPT TLDHDV IEEV EYF ++V S+G+I+NAH+V++DKE L AES PC
Sbjct: 776 VTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCI 835
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
ELAK FSIAVD+ KTGVPA P
Sbjct: 836 ELAKLFSIAVDFPKTGVPALIP 857
>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 114 bits (285), Expect = 3e-23
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PMEY PAP+ LDHDV IEEV EYF ++V +S+G+ISNAH+V++D+EP MA SDPCK
Sbjct: 669 VQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCK 728
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
+LA+ SIAVD+ KTGVPAE P
Sbjct: 729 KLAELCSIAVDFPKTGVPAEIP 750
>gb|KQK02024.1| hypothetical protein BRADI_3g59910 [Brachypodium distachyon]
Length = 1088
Score = 114 bits (284), Expect = 4e-23
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPT TLDHDV IEEV EYF ++V S+G+I+NAH+V++DKE L AES PC
Sbjct: 789 VTPMDYTPAPTETLDHDVMIEEVHEYFTNYIVNESLGIIANAHVVFADKEHLKAESAPCL 848
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
LA+ FSIAVDY KTGVPA+ P
Sbjct: 849 MLAELFSIAVDYPKTGVPAQIP 870
>ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
1 [Brachypodium distachyon]
Length = 1117
Score = 114 bits (284), Expect = 4e-23
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPT TLDHDV IEEV EYF ++V S+G+I+NAH+V++DKE L AES PC
Sbjct: 818 VTPMDYTPAPTETLDHDVMIEEVHEYFTNYIVNESLGIIANAHVVFADKEHLKAESAPCL 877
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
LA+ FSIAVDY KTGVPA+ P
Sbjct: 878 MLAELFSIAVDYPKTGVPAQIP 899
>ref|XP_010043971.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Eucalyptus
grandis]
Length = 1115
Score = 113 bits (283), Expect = 5e-23
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = -1
Query: 244 PPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCKE 65
PPM+Y PAPT TLDHDV IEEV+EYFA +MV +S+GVI+N+H V++DK+P A S C E
Sbjct: 830 PPMDYTPAPTVTLDHDVTIEEVVEYFADYMVNDSLGVIANSHTVFADKDPSKACSKSCTE 889
Query: 64 LAKQFSIAVDYAKTGVPAEFP 2
LA+ FSIAVD+ KTGVPA+ P
Sbjct: 890 LAELFSIAVDFPKTGVPAKIP 910
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 113 bits (283), Expect = 5e-23
Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 5/87 (5%)
Frame = -1
Query: 247 IPP-----MEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAE 83
IPP MEY PAP+ LDHDV IEEV EYF ++V +S+G+I+NAH+V++D+EP MA
Sbjct: 816 IPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAM 875
Query: 82 SDPCKELAKQFSIAVDYAKTGVPAEFP 2
SDPCK+LA+ FSIAVD+ KTGVPAE P
Sbjct: 876 SDPCKKLAELFSIAVDFPKTGVPAEIP 902
>gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii]
Length = 1144
Score = 113 bits (283), Expect = 5e-23
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = -1
Query: 247 IPPMEYMPAPTTTLDHDVQIEEVMEYFATFMVKNSVGVISNAHLVWSDKEPLMAESDPCK 68
+ PM+Y PAPT TLDHDV IEEV EYF ++V S+G+I+NAH+V++D+E L AES PC
Sbjct: 850 VAPMDYTPAPTETLDHDVMIEEVHEYFTNYIVNESLGIIANAHVVFADREILKAESTPCI 909
Query: 67 ELAKQFSIAVDYAKTGVPAEFP 2
+LA+ FSIAVDY KTGVPA+ P
Sbjct: 910 KLAELFSIAVDYPKTGVPAQIP 931