BLASTX nr result

ID: Cinnamomum24_contig00033794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00033794
         (362 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...    57   4e-06
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...    57   4e-06
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]                57   4e-06
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]    57   4e-06
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]    57   5e-06
emb|CAN64476.1| hypothetical protein VITISV_017482 [Vitis vinifera]    57   5e-06
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]    57   7e-06

>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = -1

Query: 362  LEDRKSTSGYVFKIGSGAVAWSSKKQPVVTLS 267
            ++DRKSTSGYVF +G GA+AW+SKKQP+VTLS
Sbjct: 1190 VDDRKSTSGYVFMLGGGAIAWASKKQPIVTLS 1221


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = -1

Query: 362  LEDRKSTSGYVFKIGSGAVAWSSKKQPVVTLS 267
            ++DRKSTSGYVF +G GA+AW+SKKQP+VTLS
Sbjct: 1190 VDDRKSTSGYVFMLGGGAIAWASKKQPIVTLS 1221


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = -1

Query: 362  LEDRKSTSGYVFKIGSGAVAWSSKKQPVVTLS 267
            ++DRKSTSGYVF +G GA+AW+SKKQP+VTLS
Sbjct: 1063 VDDRKSTSGYVFMLGGGAIAWASKKQPIVTLS 1094


>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
          Length = 1041

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = -1

Query: 362  LEDRKSTSGYVFKIGSGAVAWSSKKQPVVTLS 267
            L+DRKSTSGYVF +G+G V+WSSKKQP+VTLS
Sbjct: 946  LDDRKSTSGYVFMMGTGVVSWSSKKQPIVTLS 977


>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -1

Query: 362  LEDRKSTSGYVFKIGSGAVAWSSKKQPVVTLS 267
            L+DRKSTSGYVF + SGAV+WSSKKQPVV+LS
Sbjct: 1192 LDDRKSTSGYVFMLSSGAVSWSSKKQPVVSLS 1223


>emb|CAN64476.1| hypothetical protein VITISV_017482 [Vitis vinifera]
          Length = 497

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/31 (77%), Positives = 30/31 (96%)
 Frame = -1

Query: 362 LEDRKSTSGYVFKIGSGAVAWSSKKQPVVTL 270
           L+DRKSTSGYVF +G+GA++WSSKKQP+VTL
Sbjct: 432 LDDRKSTSGYVFMMGAGAISWSSKKQPIVTL 462


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -1

Query: 362  LEDRKSTSGYVFKIGSGAVAWSSKKQPVVTLS 267
            ++DRKSTSGYVF +  GAVAWSSKKQPVVTLS
Sbjct: 938  VDDRKSTSGYVFLLSEGAVAWSSKKQPVVTLS 969


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