BLASTX nr result

ID: Cinnamomum24_contig00031924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00031924
         (277 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011000463.1| PREDICTED: UPF0481 protein At3g47200-like [P...    58   3e-06
ref|XP_002322634.2| hypothetical protein POPTR_0016s03940g [Popu...    57   4e-06
ref|XP_010263428.1| PREDICTED: putative UPF0481 protein At3g0264...    57   5e-06

>ref|XP_011000463.1| PREDICTED: UPF0481 protein At3g47200-like [Populus euphratica]
          Length = 466

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = -2

Query: 171 SEEPTNEEWLIKIMNG-------NDPQSRPKPRIQRVDITLREIKSNDTCFDPLVVSFGP 13
           S    N EWLI+I N        +D   R  P  QRV  T R I+ N  C+DP VVS GP
Sbjct: 11  SASSKNCEWLIQIKNAGTQETTTHDDNQRKGPDFQRVPQTFRSIQQNSYCYDPSVVSIGP 70

Query: 12  YHHG 1
           YHHG
Sbjct: 71  YHHG 74


>ref|XP_002322634.2| hypothetical protein POPTR_0016s03940g [Populus trichocarpa]
           gi|550320774|gb|EEF04395.2| hypothetical protein
           POPTR_0016s03940g [Populus trichocarpa]
          Length = 461

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
 Frame = -2

Query: 171 SEEPTNEEWLIKIMNG------NDPQSRPKPRIQRVDITLREIKSNDTCFDPLVVSFGPY 10
           S EP    WLI+IMN       +D   R  P   +V  TLR+I+ N  C+DP VVS GPY
Sbjct: 13  SSEP---HWLIEIMNAAEEDTSHDDNQRKGPDFPKVPPTLRDIQQNSDCYDPSVVSIGPY 69

Query: 9   HHG 1
           HHG
Sbjct: 70  HHG 72


>ref|XP_010263428.1| PREDICTED: putative UPF0481 protein At3g02645 [Nelumbo nucifera]
          Length = 581

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
 Frame = -2

Query: 156 NEEWLIKIMNGNDPQSRP--KPRIQRVDITLREIKSNDTCFDPLVVSFGPYHHG 1
           N +WL  IMN     +R   KPR+Q+V   +R++K ++  +DP+VVS GPYHHG
Sbjct: 33  NSDWLASIMNCEQKTTRSQNKPRMQKVPKIMRDVKDSNRIYDPMVVSVGPYHHG 86


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