BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00031911
         (499 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [N...   253   4e-65
ref|XP_004502480.1| PREDICTED: replication factor C subunit 3 [C...   251   1e-64
ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [V...   250   3e-64
ref|XP_010521268.1| PREDICTED: replication factor C subunit 5 [T...   248   1e-63
ref|XP_007223184.1| hypothetical protein PRUPE_ppa009195mg [Prun...   248   1e-63
ref|XP_008219611.1| PREDICTED: replication factor C subunit 3 [P...   248   2e-63
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li...   247   3e-63
gb|KDO80573.1| hypothetical protein CISIN_1g0178841mg, partial [...   245   8e-63
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr...   245   8e-63
ref|XP_006434236.1| hypothetical protein CICLE_v10001597mg [Citr...   245   8e-63
ref|XP_006434235.1| hypothetical protein CICLE_v10001597mg [Citr...   245   8e-63
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   244   1e-62
ref|XP_008378444.1| PREDICTED: replication factor C subunit 3-li...   244   2e-62
ref|XP_012078293.1| PREDICTED: replication factor C subunit 5 [J...   244   2e-62
gb|KHN21714.1| Replication factor C subunit 5 [Glycine soja]          244   2e-62
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li...   244   2e-62
ref|XP_011027494.1| PREDICTED: replication factor C subunit 3 [P...   243   3e-62
ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [E...   243   3e-62
ref|NP_177871.1| replication factor C subunit 3 [Arabidopsis tha...   243   3e-62
ref|XP_002302226.1| replication factor C 36 kDA family protein [...   243   4e-62

>ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [Nelumbo nucifera]
          Length = 358

 Score =  253 bits (646), Expect = 4e-65
 Identities = 134/160 (83%), Positives = 140/160 (87%)
 Frame = -2

Query: 480 SSSPMEIDDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTI 301
           ++SPMEID   +  K+  KGK +I         KATPWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 4   TASPMEIDGADNRAKSN-KGKNVIAVPTDG---KATPWVEKYRPQSLADVAAHRDIVDTI 59

Query: 300 DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQI 121
           DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYG  +HNMILELNASDDRGIDVVRQQI
Sbjct: 60  DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGTQFHNMILELNASDDRGIDVVRQQI 119

Query: 120 QDFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           QDFASTQSFSFGAKS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 120 QDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVI 159


>ref|XP_004502480.1| PREDICTED: replication factor C subunit 3 [Cicer arietinum]
          Length = 363

 Score =  251 bits (642), Expect = 1e-64
 Identities = 130/164 (79%), Positives = 139/164 (84%)
 Frame = -2

Query: 492 VAEMSSSPMEIDDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDI 313
           +AE  + PM+ID  +S      KGKT+I    PS+  K+T WVEKYRPQSL DVAAHRDI
Sbjct: 1   MAEEGTYPMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDI 60

Query: 312 VDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVV 133
           VDTIDRLT EN+LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVV
Sbjct: 61  VDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120

Query: 132 RQQIQDFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           RQQIQDFASTQS SFG K  VKL+LLDEADAMTKDAQFALRRVI
Sbjct: 121 RQQIQDFASTQSLSFGVKPSVKLILLDEADAMTKDAQFALRRVI 164


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [Vitis vinifera]
           gi|302141794|emb|CBI18997.3| unnamed protein product
           [Vitis vinifera]
          Length = 360

 Score =  250 bits (638), Expect = 3e-64
 Identities = 129/156 (82%), Positives = 139/156 (89%)
 Frame = -2

Query: 468 MEIDDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDRLT 289
           M+ID+  +      KGK++++  PP    KATPWVEKYRPQSLADVAAHRDIVDTIDRLT
Sbjct: 8   MDIDEEDNHLLKANKGKSVVVGGPPDR--KATPWVEKYRPQSLADVAAHRDIVDTIDRLT 65

Query: 288 NENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQDFA 109
           +EN+LPHLLLYGPPGTGKTSTILAVARKLYG  +HNMILELNASDDRGIDVVRQQIQDFA
Sbjct: 66  SENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQIQDFA 125

Query: 108 STQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           STQSFSFGAKS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 126 STQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVI 161


>ref|XP_010521268.1| PREDICTED: replication factor C subunit 5 [Tarenaya hassleriana]
          Length = 362

 Score =  248 bits (633), Expect = 1e-63
 Identities = 127/160 (79%), Positives = 138/160 (86%)
 Frame = -2

Query: 480 SSSPMEIDDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTI 301
           S+  +++++   P K   KGK + +    S + KATPWVEKYRPQSL DVAAHRDI+DTI
Sbjct: 6   SAMEIDVEENQQPRKLINKGKAVAMGS--SRESKATPWVEKYRPQSLEDVAAHRDIIDTI 63

Query: 300 DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQI 121
           DRLTNEN+LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQI
Sbjct: 64  DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQI 123

Query: 120 QDFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           QDFASTQSFSF  KS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 124 QDFASTQSFSFSGKSSVKLVLLDEADAMTKDAQFALRRVI 163


>ref|XP_007223184.1| hypothetical protein PRUPE_ppa009195mg [Prunus persica]
           gi|462420120|gb|EMJ24383.1| hypothetical protein
           PRUPE_ppa009195mg [Prunus persica]
          Length = 302

 Score =  248 bits (633), Expect = 1e-63
 Identities = 133/163 (81%), Positives = 141/163 (86%), Gaps = 7/163 (4%)
 Frame = -2

Query: 468 MEIDDPSSPE----KTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTI 301
           M+IDD ++P          GK +++   PS Q KATPWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 8   MDIDDDNNPSPKPNNNNNMGKNVVVAAAPS-QGKATPWVEKYRPQSLADVAAHRDIVDTI 66

Query: 300 DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQI 121
           DRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQI
Sbjct: 67  DRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQI 126

Query: 120 QDFASTQSFSFG---AKSLVKLVLLDEADAMTKDAQFALRRVI 1
           QDFASTQSFSFG   AKS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 127 QDFASTQSFSFGGDSAKSSVKLVLLDEADAMTKDAQFALRRVI 169


>ref|XP_008219611.1| PREDICTED: replication factor C subunit 3 [Prunus mume]
          Length = 368

 Score =  248 bits (632), Expect = 2e-63
 Identities = 133/162 (82%), Positives = 141/162 (87%), Gaps = 6/162 (3%)
 Frame = -2

Query: 468 MEIDDPSSPE---KTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTID 298
           M+IDD ++P        KG  +++   PS Q KATPWVEKYRPQSLADVAAHRDIVDTID
Sbjct: 8   MDIDDDNNPSPKPNNNNKGINVVVAAAPS-QGKATPWVEKYRPQSLADVAAHRDIVDTID 66

Query: 297 RLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQ 118
           RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQIQ
Sbjct: 67  RLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 126

Query: 117 DFASTQSFSFG---AKSLVKLVLLDEADAMTKDAQFALRRVI 1
           DFASTQSFSFG   AKS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 127 DFASTQSFSFGGDSAKSSVKLVLLDEADAMTKDAQFALRRVI 168


>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
          Length = 364

 Score =  247 bits (630), Expect = 3e-63
 Identities = 129/159 (81%), Positives = 139/159 (87%), Gaps = 1/159 (0%)
 Frame = -2

Query: 474 SPMEIDDPSSPE-KTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTID 298
           S M+ID+  +   K    GK +I+   P   +KA+PWVEKYRPQSLADVAAHRDIVDTID
Sbjct: 8   SLMDIDEDENKNLKPKDNGKNVIVSGTPP-DIKASPWVEKYRPQSLADVAAHRDIVDTID 66

Query: 297 RLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQ 118
           RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQIQ
Sbjct: 67  RLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQ 126

Query: 117 DFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           DFASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 127 DFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVI 165


>gb|KDO80573.1| hypothetical protein CISIN_1g0178841mg, partial [Citrus sinensis]
           gi|641861887|gb|KDO80574.1| hypothetical protein
           CISIN_1g0178841mg, partial [Citrus sinensis]
           gi|641861888|gb|KDO80575.1| hypothetical protein
           CISIN_1g0178841mg, partial [Citrus sinensis]
           gi|641861889|gb|KDO80576.1| hypothetical protein
           CISIN_1g0178841mg, partial [Citrus sinensis]
          Length = 217

 Score =  245 bits (626), Expect = 8e-63
 Identities = 126/153 (82%), Positives = 135/153 (88%)
 Frame = -2

Query: 459 DDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 280
           +D +   K    GK +I+   P   +KA+PWVEKYRPQSLADVAAHRDIVDTIDRLT+EN
Sbjct: 14  EDENQNLKPKDNGKNVIVSGTPP-DIKASPWVEKYRPQSLADVAAHRDIVDTIDRLTSEN 72

Query: 279 KLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQDFASTQ 100
           +LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQIQDFASTQ
Sbjct: 73  RLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQ 132

Query: 99  SFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           SFSFG K+ VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 133 SFSFGVKASVKLVLLDEADAMTKDAQFALRRVI 165


>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
           gi|557536359|gb|ESR47477.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
          Length = 364

 Score =  245 bits (626), Expect = 8e-63
 Identities = 126/153 (82%), Positives = 135/153 (88%)
 Frame = -2

Query: 459 DDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 280
           +D +   K    GK +I+   P   +KA+PWVEKYRPQSLADVAAHRDIVDTIDRLT+EN
Sbjct: 14  EDENQNLKPKDNGKNVIVSGTPP-DIKASPWVEKYRPQSLADVAAHRDIVDTIDRLTSEN 72

Query: 279 KLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQDFASTQ 100
           +LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQIQDFASTQ
Sbjct: 73  RLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQ 132

Query: 99  SFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           SFSFG K+ VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 133 SFSFGVKASVKLVLLDEADAMTKDAQFALRRVI 165


>ref|XP_006434236.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
           gi|557536358|gb|ESR47476.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
          Length = 309

 Score =  245 bits (626), Expect = 8e-63
 Identities = 126/153 (82%), Positives = 135/153 (88%)
 Frame = -2

Query: 459 DDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 280
           +D +   K    GK +I+   P   +KA+PWVEKYRPQSLADVAAHRDIVDTIDRLT+EN
Sbjct: 14  EDENQNLKPKDNGKNVIVSGTPP-DIKASPWVEKYRPQSLADVAAHRDIVDTIDRLTSEN 72

Query: 279 KLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQDFASTQ 100
           +LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQIQDFASTQ
Sbjct: 73  RLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQ 132

Query: 99  SFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           SFSFG K+ VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 133 SFSFGVKASVKLVLLDEADAMTKDAQFALRRVI 165


>ref|XP_006434235.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
           gi|567883359|ref|XP_006434238.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
           gi|557536357|gb|ESR47475.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
           gi|557536360|gb|ESR47478.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
          Length = 305

 Score =  245 bits (626), Expect = 8e-63
 Identities = 126/153 (82%), Positives = 135/153 (88%)
 Frame = -2

Query: 459 DDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 280
           +D +   K    GK +I+   P   +KA+PWVEKYRPQSLADVAAHRDIVDTIDRLT+EN
Sbjct: 14  EDENQNLKPKDNGKNVIVSGTPP-DIKASPWVEKYRPQSLADVAAHRDIVDTIDRLTSEN 72

Query: 279 KLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQDFASTQ 100
           +LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQIQDFASTQ
Sbjct: 73  RLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQ 132

Query: 99  SFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           SFSFG K+ VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 133 SFSFGVKASVKLVLLDEADAMTKDAQFALRRVI 165


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540562|gb|EEF42129.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 360

 Score =  244 bits (624), Expect = 1e-62
 Identities = 129/160 (80%), Positives = 136/160 (85%), Gaps = 4/160 (2%)
 Frame = -2

Query: 468 MEIDDPSSPEKTTI----KGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTI 301
           M+ID+    ++  +    KGK +       V  KATPWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 8   MDIDEDVKEKQNQLSKPNKGKNVF------VDTKATPWVEKYRPQSLADVAAHRDIVDTI 61

Query: 300 DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQI 121
           DRLTNEN+LPHLLLYGPPGTGKTSTILAVARKLYG  YHNMILELNASDDRGIDVVRQQI
Sbjct: 62  DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVVRQQI 121

Query: 120 QDFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           QDFASTQSFSF AKS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 122 QDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVI 161


>ref|XP_008378444.1| PREDICTED: replication factor C subunit 3-like [Malus domestica]
          Length = 366

 Score =  244 bits (623), Expect = 2e-62
 Identities = 128/160 (80%), Positives = 138/160 (86%), Gaps = 4/160 (2%)
 Frame = -2

Query: 468 MEIDDPSSPE-KTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDRL 292
           M+IDD  +P  +   KGK +++        KATPWVEKYRPQSLADVAAHRDIVDTIDRL
Sbjct: 8   MDIDDDDNPSVQPNNKGKNVVVSAAAPSHGKATPWVEKYRPQSLADVAAHRDIVDTIDRL 67

Query: 291 TNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQDF 112
           T+EN+LPHLLLYGPPGTGKTSTILAVARKLYG  YHNMILELNASDDRGI+VVRQQIQDF
Sbjct: 68  TSENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGINVVRQQIQDF 127

Query: 111 ASTQSFSFG---AKSLVKLVLLDEADAMTKDAQFALRRVI 1
           ASTQSFSFG   AKS VK+VLLDEADAMTKDAQFALRRVI
Sbjct: 128 ASTQSFSFGGDSAKSSVKMVLLDEADAMTKDAQFALRRVI 167


>ref|XP_012078293.1| PREDICTED: replication factor C subunit 5 [Jatropha curcas]
           gi|643723235|gb|KDP32840.1| hypothetical protein
           JCGZ_12132 [Jatropha curcas]
          Length = 367

 Score =  244 bits (623), Expect = 2e-62
 Identities = 126/153 (82%), Positives = 133/153 (86%)
 Frame = -2

Query: 459 DDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDRLTNEN 280
           D   +    T KGK +++   P   +KA PWVEKYRPQSLADVAAHRDIVDTIDRLT+EN
Sbjct: 17  DQKQNDSYETNKGKNVVVAGTPP-DIKAVPWVEKYRPQSLADVAAHRDIVDTIDRLTSEN 75

Query: 279 KLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQDFASTQ 100
           +LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGI VVRQQIQDFASTQ
Sbjct: 76  RLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIGVVRQQIQDFASTQ 135

Query: 99  SFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           SFSF AKS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 136 SFSFSAKSSVKLVLLDEADAMTKDAQFALRRVI 168


>gb|KHN21714.1| Replication factor C subunit 5 [Glycine soja]
          Length = 361

 Score =  244 bits (622), Expect = 2e-62
 Identities = 128/163 (78%), Positives = 138/163 (84%), Gaps = 3/163 (1%)
 Frame = -2

Query: 480 SSSPMEIDD---PSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIV 310
           ++ PM+IDD    +SP+K    GK+++    P    KA PWVEKYRPQSL DVAAHRDIV
Sbjct: 4   TTHPMDIDDHTYTASPDK----GKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIV 59

Query: 309 DTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVR 130
           DTIDRLT EN+LPHLLLYGPPGTGKTSTILAVARKLYG+ Y NMILELNASDDRGIDVVR
Sbjct: 60  DTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVR 119

Query: 129 QQIQDFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           QQIQDFASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 120 QQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVI 162


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
           gi|947104865|gb|KRH53248.1| hypothetical protein
           GLYMA_06G114100 [Glycine max]
          Length = 361

 Score =  244 bits (622), Expect = 2e-62
 Identities = 128/163 (78%), Positives = 138/163 (84%), Gaps = 3/163 (1%)
 Frame = -2

Query: 480 SSSPMEIDD---PSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIV 310
           ++ PM+IDD    +SP+K    GK+++    P    KA PWVEKYRPQSL DVAAHRDIV
Sbjct: 4   TTHPMDIDDHTYTASPDK----GKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIV 59

Query: 309 DTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVR 130
           DTIDRLT EN+LPHLLLYGPPGTGKTSTILAVARKLYG+ Y NMILELNASDDRGIDVVR
Sbjct: 60  DTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVR 119

Query: 129 QQIQDFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           QQIQDFASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 120 QQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVI 162


>ref|XP_011027494.1| PREDICTED: replication factor C subunit 3 [Populus euphratica]
          Length = 363

 Score =  243 bits (621), Expect = 3e-62
 Identities = 127/158 (80%), Positives = 139/158 (87%), Gaps = 2/158 (1%)
 Frame = -2

Query: 468 MEIDDPSSPEKTTI--KGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDR 295
           M+ID+  +    +   KGK +++   P    KATPWVEKYRPQSLADVAAHRDI+DTIDR
Sbjct: 8   MDIDEEENQNHLSKPNKGKNVVVPATPPGG-KATPWVEKYRPQSLADVAAHRDIIDTIDR 66

Query: 294 LTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQD 115
           LT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVR+QIQD
Sbjct: 67  LTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRKQIQD 126

Query: 114 FASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           FASTQSFSFGAK+ VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 127 FASTQSFSFGAKTSVKLVLLDEADAMTKDAQFALRRVI 164


>ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [Elaeis guineensis]
          Length = 356

 Score =  243 bits (621), Expect = 3e-62
 Identities = 129/160 (80%), Positives = 137/160 (85%)
 Frame = -2

Query: 480 SSSPMEIDDPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTI 301
           +++PMEID   +P     KGK  +  D      K+ PWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 4   ATAPMEIDG-DAPLARPNKGKAALGSDG-----KSAPWVEKYRPQSLADVAAHRDIVDTI 57

Query: 300 DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQI 121
           DRLTNEN+LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVRQQI
Sbjct: 58  DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQI 117

Query: 120 QDFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           QDFAS +S SFGAKS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 118 QDFASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVI 157


>ref|NP_177871.1| replication factor C subunit 3 [Arabidopsis thaliana]
           gi|75169932|sp|Q9CAQ8.1|RFC5_ARATH RecName:
           Full=Replication factor C subunit 5; Short=AtRFC5;
           AltName: Full=Activator 1 subunit 5; AltName:
           Full=Protein EMBRYO DEFECTIVE 2810
           gi|12323400|gb|AAG51681.1|AC010704_25 putative
           replication factor C; 24844-22715 [Arabidopsis thaliana]
           gi|17529332|gb|AAL38893.1| putative replication factor C
           [Arabidopsis thaliana] gi|21436375|gb|AAM51357.1|
           putative replication factor C [Arabidopsis thaliana]
           gi|332197861|gb|AEE35982.1| replication factor C subunit
           3 [Arabidopsis thaliana]
          Length = 369

 Score =  243 bits (621), Expect = 3e-62
 Identities = 132/160 (82%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
 Frame = -2

Query: 477 SSPMEID-DPSSPEKTTIKGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTI 301
           +S M+ID D   P K   KGK ++   PP  Q KATPWVEKYRPQSL DVAAHRDI+DTI
Sbjct: 5   TSAMDIDVDEIQPRKPINKGKDVVGFGPPP-QSKATPWVEKYRPQSLDDVAAHRDIIDTI 63

Query: 300 DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQI 121
           DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYG  Y NMILELNASDDRGIDVVRQQI
Sbjct: 64  DRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVVRQQI 123

Query: 120 QDFASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           QDFASTQSFS G KS VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 124 QDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVI 162


>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
           gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
           family protein [Populus trichocarpa]
          Length = 363

 Score =  243 bits (620), Expect = 4e-62
 Identities = 127/158 (80%), Positives = 139/158 (87%), Gaps = 2/158 (1%)
 Frame = -2

Query: 468 MEIDDPSSPEKTTI--KGKTLILEDPPSVQVKATPWVEKYRPQSLADVAAHRDIVDTIDR 295
           M+ID+  +    +   KGK +++   P    KATPWVEKYRPQSLADVAAHRDI+DTIDR
Sbjct: 8   MDIDEEENQNHLSKPNKGKKVVVPATPPGG-KATPWVEKYRPQSLADVAAHRDIIDTIDR 66

Query: 294 LTNENKLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVRQQIQD 115
           LT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGA YHNMILELNASDDRGIDVVR+QIQD
Sbjct: 67  LTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRKQIQD 126

Query: 114 FASTQSFSFGAKSLVKLVLLDEADAMTKDAQFALRRVI 1
           FASTQSFSFGAK+ VKLVLLDEADAMTKDAQFALRRVI
Sbjct: 127 FASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVI 164