BLASTX nr result

ID: Cinnamomum24_contig00031855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00031855
         (334 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008779704.1| PREDICTED: putative ribonuclease H protein A...    59   1e-06
ref|XP_008775267.1| PREDICTED: putative ribonuclease H protein A...    58   3e-06
ref|XP_008795217.1| PREDICTED: putative ribonuclease H protein A...    57   4e-06
ref|XP_008794071.1| PREDICTED: putative ribonuclease H protein A...    57   4e-06
ref|XP_008780473.1| PREDICTED: putative ribonuclease H protein A...    56   9e-06
ref|XP_008780255.1| PREDICTED: putative ribonuclease H protein A...    56   9e-06
ref|XP_008784879.1| PREDICTED: putative ribonuclease H protein A...    56   9e-06

>ref|XP_008779704.1| PREDICTED: putative ribonuclease H protein At1g65750, partial
           [Phoenix dactylifera]
          Length = 567

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
 Frame = +1

Query: 1   VNCAIPVFWLGHSTIPGKVIKEINRTNAAFLWSGENSHQGLHPIAWDTITQPIHEGGPA- 177
           V C++P++ + H+ +P  V++ I R   +FLW       G+H IAW+ + QP+ EGG   
Sbjct: 166 VLCSMPIYLMAHTAVPKSVLERIERLMRSFLWGSYGGGHGIHLIAWERVCQPLREGGLGV 225

Query: 178 -----------ARDTAGFSQEPESFW 222
                      AR    F  EP   W
Sbjct: 226 QSLSVRREALLARRAVQFILEPHGHW 251


>ref|XP_008775267.1| PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix
           dactylifera]
          Length = 322

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
 Frame = +1

Query: 1   VNCAIPVFWLGHSTIPGKVIKEINRTNAAFLWSGENSHQGLHPIAWDTITQPIHEGGPA- 177
           V C++P++ + H+ +P  V++ I R   +FLW       G+H +AW+ + QP+ EGG   
Sbjct: 88  VLCSMPIYLMAHTVVPKSVLERIERLMRSFLWGSYGGGHGIHLLAWERVCQPLSEGGLGV 147

Query: 178 -----------ARDTAGFSQEPESFW 222
                      AR    F  EP   W
Sbjct: 148 QSLSVRREALLARRAVQFVLEPHGHW 173


>ref|XP_008795217.1| PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix
           dactylifera]
          Length = 804

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 22/57 (38%), Positives = 36/57 (63%)
 Frame = +1

Query: 1   VNCAIPVFWLGHSTIPGKVIKEINRTNAAFLWSGENSHQGLHPIAWDTITQPIHEGG 171
           V C++PV+ + H+T+P  V+  I R+  +FLW      QG+H +AW+ +  P+ EGG
Sbjct: 316 VLCSMPVYIMAHTTVPKTVLAGIERSMRSFLWGSSGRGQGVHLVAWERVCLPLREGG 372


>ref|XP_008794071.1| PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix
           dactylifera]
          Length = 440

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
 Frame = +1

Query: 10  AIPVFWLGHSTIPGKVIKEINRTNAAFLWSGENSHQGLHPIAWDTITQPIHEGG------ 171
           ++P++ + H+ IP  V++ + +    F+W   +   G+H +AW+ + QPI  GG      
Sbjct: 178 SVPIYLMSHAVIPVAVLRSLEQLFREFIWGRSSGRGGIHLLAWEVVCQPISAGGLRVQSL 237

Query: 172 ------PAARDTAGFSQEPESFWGA 228
                  AAR  A F  EPES W +
Sbjct: 238 VARREALAARHAARFVLEPESMWSS 262


>ref|XP_008780473.1| PREDICTED: putative ribonuclease H protein At1g65750, partial
           [Phoenix dactylifera]
          Length = 249

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 22/57 (38%), Positives = 35/57 (61%)
 Frame = +1

Query: 1   VNCAIPVFWLGHSTIPGKVIKEINRTNAAFLWSGENSHQGLHPIAWDTITQPIHEGG 171
           V C+IPV+ + H+ +P  V+  I R+  +FLW      QG+H +AW+ +  P+ EGG
Sbjct: 10  VLCSIPVYIMAHTIVPKTVLAGIERSMRSFLWGSSGRGQGVHLVAWERVCLPLREGG 66


>ref|XP_008780255.1| PREDICTED: putative ribonuclease H protein At1g65750, partial
           [Phoenix dactylifera]
          Length = 311

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 22/57 (38%), Positives = 35/57 (61%)
 Frame = +1

Query: 1   VNCAIPVFWLGHSTIPGKVIKEINRTNAAFLWSGENSHQGLHPIAWDTITQPIHEGG 171
           V C++PV+ + H+T+P  V+  I R+  +FLW      QG+H +AW  +  P+ EGG
Sbjct: 56  VLCSMPVYIMAHTTVPKTVLAGIERSMRSFLWGSSGRGQGVHLVAWGRVCLPLREGG 112


>ref|XP_008784879.1| PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix
           dactylifera]
          Length = 552

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
 Frame = +1

Query: 1   VNCAIPVFWLGHSTIPGKVIKEINRTNAAFLWSGENSHQGLHPIAWDTITQPIHEGGPA- 177
           V C++PV+ + H+ +P  V+  I R   +FLW       G+H +AW+ +  P+ EGG   
Sbjct: 183 VLCSMPVYIMAHTIVPKMVLAGIERNMRSFLWGSSRRGHGVHLVAWERVCLPLSEGGLGV 242

Query: 178 -----------ARDTAGFSQEPESFW 222
                      AR    F  EP  FW
Sbjct: 243 QSLLARRETLLARRAVQFVLEPHGFW 268


Top