BLASTX nr result

ID: Cinnamomum24_contig00031791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00031791
         (286 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010250424.1| PREDICTED: pentatricopeptide repeat-containi...    78   2e-12
ref|XP_006376939.1| hypothetical protein POPTR_0012s11360g [Popu...    72   2e-10
ref|XP_011003536.1| PREDICTED: pentatricopeptide repeat-containi...    70   6e-10
emb|CBI29768.3| unnamed protein product [Vitis vinifera]               61   3e-07
ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
gb|KDO57681.1| hypothetical protein CISIN_1g037256mg [Citrus sin...    61   4e-07
ref|XP_006485046.1| PREDICTED: pentatricopeptide repeat-containi...    61   4e-07
ref|XP_006437011.1| hypothetical protein CICLE_v10033882mg [Citr...    61   4e-07
ref|XP_002511057.1| pentatricopeptide repeat-containing protein,...    56   9e-06

>ref|XP_010250424.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Nelumbo nucifera]
          Length = 724

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 38/55 (69%), Positives = 42/55 (76%)
 Frame = -3

Query: 167 SHCFYDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           S C Y HLL SC++L + KQIHS LSTTG I  NPHL AQ+IIKYS FGD GSAR
Sbjct: 49  SGCLYSHLLHSCNTLNSLKQIHSSLSTTGLIKQNPHLSAQIIIKYSKFGDPGSAR 103


>ref|XP_006376939.1| hypothetical protein POPTR_0012s11360g [Populus trichocarpa]
           gi|550326873|gb|ERP54736.1| hypothetical protein
           POPTR_0012s11360g [Populus trichocarpa]
          Length = 648

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -3

Query: 158 FYDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           FYDHLLKSC+   + KQIHS L+TTG I  +PHLGAQ+IIKY+ F D   AR
Sbjct: 39  FYDHLLKSCNGSSSLKQIHSALTTTGLITTSPHLGAQIIIKYAKFDDLNRAR 90


>ref|XP_011003536.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Populus euphratica]
          Length = 716

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = -3

Query: 158 FYDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           FYDHLLKSC+   + KQIHS L+TTG I  +PHLG Q+IIKY+ F D   AR
Sbjct: 39  FYDHLLKSCNGSSSLKQIHSALTTTGLITTSPHLGGQIIIKYAKFDDLNRAR 90


>emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = -3

Query: 173 PYSHCFYDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           P  H FYDHLL+ C+SL   K IHS LST GF+   PH  A++II YS  GD  SAR
Sbjct: 22  PSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSAR 78


>ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|731411649|ref|XP_010658065.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|731411651|ref|XP_010658066.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|731411653|ref|XP_010658067.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
          Length = 707

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = -3

Query: 173 PYSHCFYDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           P  H FYDHLL+ C+SL   K IHS LST GF+   PH  A++II YS  GD  SAR
Sbjct: 22  PSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSAR 78


>gb|KDO57681.1| hypothetical protein CISIN_1g037256mg [Citrus sinensis]
          Length = 680

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/57 (50%), Positives = 41/57 (71%)
 Frame = -3

Query: 173 PYSHCFYDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           P +  FYD LLKSC+ L + +QIHS L+T+G I    HLGA++IIKY+ +G+  +AR
Sbjct: 6   PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62


>ref|XP_006485046.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Citrus sinensis]
          Length = 685

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/57 (50%), Positives = 41/57 (71%)
 Frame = -3

Query: 173 PYSHCFYDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           P +  FYD LLKSC+ L + +QIHS L+T+G I    HLGA++IIKY+ +G+  +AR
Sbjct: 6   PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62


>ref|XP_006437011.1| hypothetical protein CICLE_v10033882mg [Citrus clementina]
           gi|557539207|gb|ESR50251.1| hypothetical protein
           CICLE_v10033882mg [Citrus clementina]
          Length = 685

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/57 (50%), Positives = 41/57 (71%)
 Frame = -3

Query: 173 PYSHCFYDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           P +  FYD LLKSC+ L + +QIHS L+T+G I    HLGA++IIKY+ +G+  +AR
Sbjct: 6   PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62


>ref|XP_002511057.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550172|gb|EEF51659.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 543

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = -3

Query: 155 YDHLLKSCSSLEATKQIHSVLSTTGFIGVNPHLGAQVIIKYS*FGDCGSAR 3
           YD+L+K C  L   KQIHS L+T   I  +PHL AQ+IIKY+ FG    AR
Sbjct: 40  YDNLVKFCDGLAVLKQIHSALTTNSLITKSPHLAAQIIIKYAKFGYLNCAR 90


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