BLASTX nr result

ID: Cinnamomum24_contig00031542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00031542
         (265 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010269942.1| PREDICTED: F-box protein At4g22280-like [Nel...    66   1e-08
emb|CBI23317.3| unnamed protein product [Vitis vinifera]               58   3e-06
ref|XP_010646159.1| PREDICTED: putative F-box protein At1g49610 ...    57   4e-06
emb|CBI23316.3| unnamed protein product [Vitis vinifera]               57   4e-06
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]    57   4e-06

>ref|XP_010269942.1| PREDICTED: F-box protein At4g22280-like [Nelumbo nucifera]
           gi|720044611|ref|XP_010269943.1| PREDICTED: F-box
           protein At4g22280-like [Nelumbo nucifera]
           gi|720044614|ref|XP_010269944.1| PREDICTED: F-box
           protein At4g22280-like [Nelumbo nucifera]
           gi|720044617|ref|XP_010269945.1| PREDICTED: F-box
           protein At4g22280-like [Nelumbo nucifera]
          Length = 505

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 38/85 (44%), Positives = 50/85 (58%)
 Frame = +1

Query: 4   QALSLRALQNLPRLIFKHKHLILETGPTKWELPGIVYLLKNSPDLETLSVKIKESKLCYE 183
           Q LS   +QN   L    K L L+TG TKWELPGI+YLL++SP+LETL + I  S    +
Sbjct: 322 QMLSTWEVQNKDPLRLNVKCLELKTGLTKWELPGILYLLRSSPELETLVINITSSP-NID 380

Query: 184 LSMVLWEEFDLDETEYWESFSSPFS 258
           +   +  ++D  E EYW S    FS
Sbjct: 381 IDDEIENQYDFSEREYWRSQEHCFS 405


>emb|CBI23317.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
 Frame = +1

Query: 4   QALSLRALQNLPRLIFKHKHLILETGPTKWELPGIVYLLKNSPDLETLSVKIKE---SKL 174
           + LS+  ++++P  + KH++LIL T P KW+LPGI  LLK+SPDLE L + +      K+
Sbjct: 343 EVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKSSPDLEKLHIDVNPLNVLKV 402

Query: 175 CY 180
           C+
Sbjct: 403 CF 404


>ref|XP_010646159.1| PREDICTED: putative F-box protein At1g49610 [Vitis vinifera]
          Length = 512

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/52 (48%), Positives = 38/52 (73%)
 Frame = +1

Query: 4   QALSLRALQNLPRLIFKHKHLILETGPTKWELPGIVYLLKNSPDLETLSVKI 159
           + LS+  ++++P  + KH++LIL T P KW+LPGI  LLK+SPDLE L + +
Sbjct: 343 EVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKSSPDLEKLHIDV 394


>emb|CBI23316.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/52 (48%), Positives = 38/52 (73%)
 Frame = +1

Query: 4   QALSLRALQNLPRLIFKHKHLILETGPTKWELPGIVYLLKNSPDLETLSVKI 159
           + LS+  ++++P  + KH++LIL T P KW+LPGI  LLK+SPDLE L + +
Sbjct: 23  EVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKSSPDLEKLHIDV 74


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/52 (48%), Positives = 38/52 (73%)
 Frame = +1

Query: 4   QALSLRALQNLPRLIFKHKHLILETGPTKWELPGIVYLLKNSPDLETLSVKI 159
           + LS+  ++++P  + KH++LIL T P KW+LPGI  LLK+SPDLE L + +
Sbjct: 343 EVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKSSPDLEKLHIDV 394


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