BLASTX nr result

ID: Cinnamomum24_contig00031071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00031071
         (416 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.2| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14
ref|XP_010030710.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07

>ref|XP_003632122.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 678

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = -3

Query: 255 MNSTHRNLPSIAERILFHLQKSLINLRQLQQVQAQILTNSSLQTNSLITHFLSSCARYRK 76
           M S  +NL S+A+ + F  Q + +NL +LQQ+  QILTN    +NSL+T+FLSSC R +K
Sbjct: 1   MTSIPKNLSSLADYLAFRSQNAFLNLSELQQIHCQILTNDYFHSNSLVTNFLSSCFRSQK 60

Query: 75  LDYASHFLRNLRNPTSSSWNSMIKL 1
             YA  FL+NL +P  S WNSMI++
Sbjct: 61  PRYALVFLQNLTSPDPSLWNSMIRV 85


>ref|XP_010030710.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           [Eucalyptus grandis]
          Length = 1024

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 34/83 (40%), Positives = 49/83 (59%)
 Frame = -3

Query: 249 STHRNLPSIAERILFHLQKSLINLRQLQQVQAQILTNSSLQTNSLITHFLSSCARYRKLD 70
           S  +NL S+A+ +   LQK   + +QL+Q  AQ L    L++  L+T FLSSC R ++  
Sbjct: 349 SAPKNLWSLADHLAVVLQKHSFSRKQLEQFHAQFLAGGLLRSAPLLTTFLSSCYRSQEPR 408

Query: 69  YASHFLRNLRNPTSSSWNSMIKL 1
           YA  F+RNL     S WNS ++L
Sbjct: 409 YALLFMRNLPICIPSLWNSAVRL 431


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