BLASTX nr result

ID: Cinnamomum24_contig00030793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00030793
         (324 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520763.1| conserved hypothetical protein [Ricinus comm...    62   1e-07
ref|XP_008780839.1| PREDICTED: uncharacterized protein LOC103700...    57   7e-06

>ref|XP_002520763.1| conserved hypothetical protein [Ricinus communis]
           gi|223540148|gb|EEF41725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = -3

Query: 238 TKSMKSALVVVCALAFGWLNTQLVFKPFLDRTRDAIERADPDARESHTSPPSD 80
           TK +K A+VVV ALAFGWL  ++ FKPFLD+ R A++++DP+ R+   SPP D
Sbjct: 3   TKPVKQAMVVVGALAFGWLAIEMAFKPFLDKARAAMDKSDPE-RDPDDSPPKD 54


>ref|XP_008780839.1| PREDICTED: uncharacterized protein LOC103700742 [Phoenix
           dactylifera]
          Length = 81

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
 Frame = -3

Query: 265 GGIRGRESATKSMKSALVVVCALAFGWLNTQLVFKPFLDRTRDAIERADPDARES----- 101
           G  R R +A   M+S LVVV A+AFG+L+ Q+ FKPFLDR ++A+E   P  RE+     
Sbjct: 4   GASRARRNA---MRSGLVVVGAIAFGYLSFQVGFKPFLDRAQEAMEITLPVDREAGQQEE 60

Query: 100 HTSPPSDSYIS 68
             SPPSD+ IS
Sbjct: 61  RRSPPSDTTIS 71


Top