BLASTX nr result

ID: Cinnamomum24_contig00027709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00027709
         (362 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255765.1| PREDICTED: replication protein A 70 kDa DNA-...   102   9e-20
ref|XP_010920581.1| PREDICTED: LOW QUALITY PROTEIN: replication ...    92   1e-16
ref|XP_008784586.1| PREDICTED: replication protein A 70 kDa DNA-...    89   1e-15
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...    80   6e-13
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]    80   6e-13
ref|XP_009387520.1| PREDICTED: replication protein A 70 kDa DNA-...    74   3e-11
ref|XP_009416233.1| PREDICTED: replication protein A 70 kDa DNA-...    72   1e-10
emb|CDP14940.1| unnamed protein product [Coffea canephora]             63   8e-08

>ref|XP_010255765.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A
           [Nelumbo nucifera]
          Length = 892

 Score =  102 bits (255), Expect = 9e-20
 Identities = 61/121 (50%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
 Frame = -2

Query: 361 IIINLEVIVEKCDLIGEPKQYVDGATGSSTAPQGRASLPTQTTSIGQPVMVVGNAQPY-G 185
           III LEVI+EKCD IGEPKQYV G   S  +   R S+P Q +S+ Q     GN Q Y G
Sbjct: 97  IIIELEVILEKCDPIGEPKQYVQGGAASGASQGVRPSMPIQ-SSVNQTGTATGNPQSYVG 155

Query: 184 GSLTSGHVSGQNPTSASPL-HSKVDSAGNPQSRGSTFAGGPVSGG-SVTKGTALYSKAEP 11
            SL  G   GQN +   PL HSK D   NPQS  S+FAG P SG  +V  G  +Y K EP
Sbjct: 156 TSLPGGQTGGQNVSGGPPLHHSKTDPVANPQSYNSSFAGNPDSGRYTVNNGPPVYPKTEP 215

Query: 10  N 8
           +
Sbjct: 216 S 216


>ref|XP_010920581.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
           DNA-binding subunit A-like [Elaeis guineensis]
          Length = 884

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 51/120 (42%), Positives = 69/120 (57%)
 Frame = -2

Query: 361 IIINLEVIVEKCDLIGEPKQYVDGATGSSTAPQGRASLPTQTTSIGQPVMVVGNAQPYGG 182
           I+INLEV+V K D+IG P  +  G + S    Q RA +  Q+TSI QP M  GN QPYGG
Sbjct: 95  IVINLEVLVPKSDIIGAPTPFDSGVSAS----QNRAPMSAQSTSINQPSMAAGNPQPYGG 150

Query: 181 SLTSGHVSGQNPTSASPLHSKVDSAGNPQSRGSTFAGGPVSGGSVTKGTALYSKAEPNVG 2
           S + G  +GQN   A+ +  K D   N  S GS++  G  SG +++  ++L  KAE   G
Sbjct: 151 SRSGGLPAGQNMMGAASMSPKPDPVANTSSYGSSYGTGLTSGRNMSNLSSLQPKAEQGSG 210


>ref|XP_008784586.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Phoenix dactylifera]
          Length = 884

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 50/120 (41%), Positives = 68/120 (56%)
 Frame = -2

Query: 361 IIINLEVIVEKCDLIGEPKQYVDGATGSSTAPQGRASLPTQTTSIGQPVMVVGNAQPYGG 182
           I+INLEV+V K D+IG P  +  GA+ S    Q RA +  Q+TSI QP M  G  QPYGG
Sbjct: 95  IVINLEVLVPKSDIIGVPTPFDSGASAS----QNRAPMSAQSTSINQPGMAAGIPQPYGG 150

Query: 181 SLTSGHVSGQNPTSASPLHSKVDSAGNPQSRGSTFAGGPVSGGSVTKGTALYSKAEPNVG 2
           S + G  +GQN    + +  K D   N  S  S++  GP+SG +++   +L  KAE   G
Sbjct: 151 SRSGGLPAGQNMMGGASVSPKPDPVTNTSSYSSSYGTGPISGRNMSNLNSLQPKAEQGSG 210


>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A
           [Vitis vinifera]
          Length = 882

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 54/122 (44%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = -2

Query: 361 IIINLEVIVEKCDLIGEPKQYVDGATGSSTAPQGRASLPTQTTSIGQPVMVVGNAQPYG- 185
           III+L+VI+EKCD IGEPKQYV G T    AP  R S P   +S+  P  V+GN Q +G 
Sbjct: 98  IIIDLDVILEKCDPIGEPKQYVQGGTAGGVAPIARTSAP-MPSSVDHPGTVLGNPQSFGN 156

Query: 184 GSLTSGHVSGQNPTS-ASPLHSKVDSAGNPQSRGSTFAGGPVSGGSVTKGTALYSKAEPN 8
            SLT G  +  N    ASP H+   S+ NP S    FAG        T    +YSK +P+
Sbjct: 157 SSLTGGSAAKPNMAGVASPYHANSFSS-NPDS--GRFAG--------TNAPPMYSKMQPD 205

Query: 7   VG 2
            G
Sbjct: 206 AG 207


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 54/122 (44%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = -2

Query: 361 IIINLEVIVEKCDLIGEPKQYVDGATGSSTAPQGRASLPTQTTSIGQPVMVVGNAQPYG- 185
           III+L+VI+EKCD IGEPKQYV G T    AP  R S P   +S+  P  V+GN Q +G 
Sbjct: 98  IIIDLDVILEKCDPIGEPKQYVQGGTAGGVAPIARTSAP-MPSSVDHPGTVLGNPQSFGN 156

Query: 184 GSLTSGHVSGQNPTS-ASPLHSKVDSAGNPQSRGSTFAGGPVSGGSVTKGTALYSKAEPN 8
            SLT G  +  N    ASP H+   S+ NP S    FAG        T    +YSK +P+
Sbjct: 157 SSLTGGSAAKPNMAGVASPYHANSFSS-NPDS--GRFAG--------TNAPPMYSKMQPD 205

Query: 7   VG 2
            G
Sbjct: 206 AG 207


>ref|XP_009387520.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Musa acuminata subsp. malaccensis]
           gi|695080153|ref|XP_009387521.1| PREDICTED: replication
           protein A 70 kDa DNA-binding subunit A-like [Musa
           acuminata subsp. malaccensis]
          Length = 875

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 47/120 (39%), Positives = 62/120 (51%)
 Frame = -2

Query: 361 IIINLEVIVEKCDLIGEPKQYVDGATGSSTAPQGRASLPTQTTSIGQPVMVVGNAQPYGG 182
           I+INLEV+V   + IGEPK Y +G      A Q RA +P Q +S  QPV    N Q YGG
Sbjct: 96  IVINLEVLVSSSNGIGEPKLYDNGP-----ASQNRAPIPAQPSSTDQPVKAAVNPQTYGG 150

Query: 181 SLTSGHVSGQNPTSASPLHSKVDSAGNPQSRGSTFAGGPVSGGSVTKGTALYSKAEPNVG 2
             +S   SGQN    S L+ K +   N  S G ++  GP+S  ++        KAE  +G
Sbjct: 151 PNSSKSNSGQNVAGVS-LNPKSEPMTNNSSFGGSYGSGPMSSRNMNSPNIEQPKAEQGIG 209


>ref|XP_009416233.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Musa acuminata subsp. malaccensis]
          Length = 863

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 44/120 (36%), Positives = 62/120 (51%)
 Frame = -2

Query: 361 IIINLEVIVEKCDLIGEPKQYVDGATGSSTAPQGRASLPTQTTSIGQPVMVVGNAQPYGG 182
           IIINLEV+V   ++IGEPK Y +G+     A Q R   P Q+TS  QPV+   N Q YGG
Sbjct: 96  IIINLEVLVSNSNVIGEPKLYDNGS-----ASQNRVPSPVQSTSADQPVIAAANPQNYGG 150

Query: 181 SLTSGHVSGQNPTSASPLHSKVDSAGNPQSRGSTFAGGPVSGGSVTKGTALYSKAEPNVG 2
             +S    GQN T    L+   ++     S G ++  G +S  +     + + K+E  VG
Sbjct: 151 IHSSTPNIGQNVTKGPSLNPATEAVTTNSSFGGSYGNGVMSTRNTNSVPSEHPKSEQGVG 210


>emb|CDP14940.1| unnamed protein product [Coffea canephora]
          Length = 871

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 48/123 (39%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
 Frame = -2

Query: 361 IIINLEVIVEKCDLIGEPKQYVDGATGSSTAPQGRASLPTQTTSIGQPVMVVGNAQ-PYG 185
           III+LEVI E CD IGEPK YV   +   +A +  AS       + QPV V G+ Q    
Sbjct: 102 IIIDLEVIRETCDPIGEPKPYVLRNSNDVSAQKPSASAHV----VNQPVSVTGSPQSASA 157

Query: 184 GSLTSGHVSGQNPTSASPLH-SKVDSAGNPQSRGSTFAGGPVSGG-SVTKGTALYSKAEP 11
           GS   G     N T  + +   ++DS     + GS+F G P SG  + T    +YSKAEP
Sbjct: 158 GSTIGGSAPRPNITGVTRMQPPEMDSGAVSHTYGSSFVGKPDSGRYNPTMAPPVYSKAEP 217

Query: 10  NVG 2
             G
Sbjct: 218 GSG 220


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