BLASTX nr result
ID: Cinnamomum24_contig00027366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00027366
(352 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010256705.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-15
ref|XP_010256704.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-15
emb|CAN71830.1| hypothetical protein VITISV_033606 [Vitis vinifera] 87 4e-15
ref|XP_010658483.1| PREDICTED: pentatricopeptide repeat-containi... 86 8e-15
ref|XP_010253997.1| PREDICTED: pentatricopeptide repeat-containi... 67 5e-09
ref|XP_008218306.1| PREDICTED: pentatricopeptide repeat-containi... 64 4e-08
ref|XP_010110716.1| hypothetical protein L484_009204 [Morus nota... 64 6e-08
ref|XP_010102252.1| hypothetical protein L484_024533 [Morus nota... 64 6e-08
ref|XP_009384043.1| PREDICTED: pentatricopeptide repeat-containi... 63 7e-08
ref|XP_013456860.1| pentatricopeptide (PPR) repeat protein [Medi... 63 7e-08
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi... 63 7e-08
ref|XP_006833001.2| PREDICTED: pentatricopeptide repeat-containi... 63 1e-07
gb|ERM98279.1| hypothetical protein AMTR_s04823p00002340, partia... 63 1e-07
ref|XP_007206274.1| hypothetical protein PRUPE_ppa016070mg [Prun... 63 1e-07
ref|XP_011625842.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_009345233.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_010648490.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_002318172.1| pentatricopeptide repeat-containing family p... 62 1e-07
ref|XP_006360814.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
gb|KHN37122.1| Pentatricopeptide repeat-containing protein [Glyc... 62 2e-07
>ref|XP_010256705.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like isoform X2 [Nelumbo nucifera]
Length = 845
Score = 88.6 bits (218), Expect = 2e-15
Identities = 40/60 (66%), Positives = 48/60 (80%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
+Y NCGGLGYGRLIF+RVK++DIVCWNTM+K YA L +EA+ELL MH G +PN TT
Sbjct: 186 VYANCGGLGYGRLIFNRVKDKDIVCWNTMVKGYAQINLFEEAVELLRCMHIDGKSPNITT 245
>ref|XP_010256704.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like isoform X1 [Nelumbo nucifera]
Length = 958
Score = 88.6 bits (218), Expect = 2e-15
Identities = 40/60 (66%), Positives = 48/60 (80%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
+Y NCGGLGYGRLIF+RVK++DIVCWNTM+K YA L +EA+ELL MH G +PN TT
Sbjct: 299 VYANCGGLGYGRLIFNRVKDKDIVCWNTMVKGYAQINLFEEAVELLRCMHIDGKSPNITT 358
>emb|CAN71830.1| hypothetical protein VITISV_033606 [Vitis vinifera]
Length = 799
Score = 87.4 bits (215), Expect = 4e-15
Identities = 43/76 (56%), Positives = 53/76 (69%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
+Y NCGGL +GRL+FDRVKE+D+ CWNTMIKSY L DEAI LL MH G++P K+T
Sbjct: 300 VYANCGGLYFGRLVFDRVKEKDVSCWNTMIKSYVQANLSDEAISLLKFMHLDGIHPVKST 359
Query: 130 XXQIGTCGSESKFFIY 83
S+SKF I+
Sbjct: 360 WYCFFPHYSKSKFSIH 375
>ref|XP_010658483.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Vitis vinifera]
Length = 958
Score = 86.3 bits (212), Expect = 8e-15
Identities = 43/76 (56%), Positives = 53/76 (69%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
+Y NCGGL +GRL+FDRVKE+D+ CWNTMIKSY L DEAI LL MH G++P K+T
Sbjct: 300 VYGNCGGLYFGRLVFDRVKEKDVSCWNTMIKSYVQANLSDEAISLLKFMHLDGIHPVKST 359
Query: 130 XXQIGTCGSESKFFIY 83
S+SKF I+
Sbjct: 360 WYCFFPHYSKSKFSIH 375
>ref|XP_010253997.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Nelumbo nucifera]
Length = 740
Score = 67.0 bits (162), Expect = 5e-09
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
MY CG LG R +FD++K RD+V WNTMI Y+ +EAIEL QM G PN+TT
Sbjct: 193 MYSKCGNLGMARRVFDQMKRRDLVTWNTMITGYSQNYCGEEAIELFYQMQLKGFLPNETT 252
>ref|XP_008218306.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Prunus mume]
Length = 802
Score = 63.9 bits (154), Expect = 4e-08
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNK 137
MY CG + + RL+FD++ ERD+V W+TMI+SY L EA+EL+ +MH V P++
Sbjct: 169 MYSECGNVVFARLLFDQMAERDVVSWSTMIRSYVRNRLFREALELIREMHCMQVKPSE 226
>ref|XP_010110716.1| hypothetical protein L484_009204 [Morus notabilis]
gi|587941305|gb|EXC27881.1| hypothetical protein
L484_009204 [Morus notabilis]
Length = 619
Score = 63.5 bits (153), Expect = 6e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = -1
Query: 313 GMYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKT 134
GMY CG L R +FD + ++D+V WN MI YA L DEAI L M G+NPNK
Sbjct: 217 GMYGKCGDLCSARRVFDSMTKKDLVTWNAMISGYAQNGLSDEAIRLFGDMKEAGINPNKI 276
Query: 133 T 131
T
Sbjct: 277 T 277
>ref|XP_010102252.1| hypothetical protein L484_024533 [Morus notabilis]
gi|587904999|gb|EXB93195.1| hypothetical protein
L484_024533 [Morus notabilis]
Length = 805
Score = 63.5 bits (153), Expect = 6e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNK 137
MY CG RL+FD++ ERD+V W+TMI+SY LL EA++L+ +MHS V P++
Sbjct: 172 MYSECGSAVSARLMFDQMAERDVVSWSTMIRSYVRNRLLGEALDLIREMHSVRVRPSQ 229
>ref|XP_009384043.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Musa acuminata subsp. malaccensis]
Length = 791
Score = 63.2 bits (152), Expect = 7e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNK 137
MY CG LG+ +FD + +RD+V W+TMI+SYA L DEAIEL+ +M G+ P++
Sbjct: 158 MYSECGSLGFATKLFDEMPDRDVVSWSTMIRSYAWCKLFDEAIELVREMLRSGIRPSE 215
>ref|XP_013456860.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
gi|657389139|gb|KEH30891.1| pentatricopeptide (PPR)
repeat protein [Medicago truncatula]
Length = 814
Score = 63.2 bits (152), Expect = 7e-08
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -1
Query: 304 VNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTTXX 125
V CG L R++FD + ERD+VCWN++I Y + LL E I+L ++M S G+ P+ T
Sbjct: 184 VKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMA 243
Query: 124 QI-GTCG 107
I CG
Sbjct: 244 SILKACG 250
>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
protein product [Vitis vinifera]
Length = 618
Score = 63.2 bits (152), Expect = 7e-08
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = -1
Query: 313 GMYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKT 134
GMY CG L R +FDR+ ++D+V WN MI YA + DEAI L M GVNP+K
Sbjct: 270 GMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKI 329
Query: 133 T 131
T
Sbjct: 330 T 330
Score = 58.2 bits (139), Expect = 2e-06
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
MY CG LG R +FD + E+D+V WN+MI Y+ +A+ L +M G P++ T
Sbjct: 170 MYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMT 229
Query: 130 XXQI-GTCG 107
I G CG
Sbjct: 230 LVSILGACG 238
>ref|XP_006833001.2| PREDICTED: pentatricopeptide repeat-containing protein At2g13600,
partial [Amborella trichopoda]
Length = 445
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPN 140
MY CG + R IFDR+ ERDIV W MI+ Y+ K L E++ L LQM G+NPN
Sbjct: 186 MYSKCGSIECARYIFDRIIERDIVSWTAMIQGYSQKGLCHESLRLFLQMVENGMNPN 242
>gb|ERM98279.1| hypothetical protein AMTR_s04823p00002340, partial [Amborella
trichopoda]
Length = 567
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPN 140
MY CG + R IFDR+ ERDIV W MI+ Y+ K L E++ L LQM G+NPN
Sbjct: 324 MYSKCGSIECARYIFDRIIERDIVSWTAMIQGYSQKGLCHESLRLFLQMVENGMNPN 380
>ref|XP_007206274.1| hypothetical protein PRUPE_ppa016070mg [Prunus persica]
gi|462401916|gb|EMJ07473.1| hypothetical protein
PRUPE_ppa016070mg [Prunus persica]
Length = 608
Score = 62.8 bits (151), Expect = 1e-07
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNK 137
MY CG + + RL+FD++ +RD+V W+TMI+SY L EA+EL+ +MH V P++
Sbjct: 54 MYSECGNVVFARLLFDQMADRDVVSWSTMIRSYVRNRLFREALELIKEMHCMQVKPSE 111
>ref|XP_011625842.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Amborella trichopoda]
Length = 677
Score = 62.4 bits (150), Expect = 1e-07
Identities = 31/61 (50%), Positives = 35/61 (57%)
Frame = -1
Query: 313 GMYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKT 134
GMY CG L R IFDR+ ERD+V WN MI YA L EAI L +M GV +K
Sbjct: 331 GMYSKCGNLISARKIFDRMSERDVVAWNAMITGYAQNGLSKEAIRLFYEMRERGVGVDKI 390
Query: 133 T 131
T
Sbjct: 391 T 391
>ref|XP_009345233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Pyrus x bretschneideri]
Length = 619
Score = 62.4 bits (150), Expect = 1e-07
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
MY CG LG+ R +FD + ERD+V WN+MI Y +A+ L +M + G P++ T
Sbjct: 175 MYARCGELGFARNVFDEISERDLVSWNSMISGYCKMGCAGDAVRLFCEMRTDGFEPDERT 234
Query: 130 XXQI-GTCG 107
+ G CG
Sbjct: 235 LVTVLGACG 243
Score = 59.7 bits (143), Expect = 8e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = -1
Query: 313 GMYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKT 134
GMY CG L R +FD +K++D + WN MI YA + DEA+ L M GVNP+K
Sbjct: 275 GMYGKCGDLSSARRVFDSMKKKDRITWNAMISGYAQNGMSDEAMVLFDGMKEAGVNPDKI 334
Query: 133 T 131
T
Sbjct: 335 T 335
>ref|XP_010648490.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Vitis vinifera]
gi|296081839|emb|CBI20844.3| unnamed protein product
[Vitis vinifera]
Length = 700
Score = 62.4 bits (150), Expect = 1e-07
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
MY CG L L FD+++ +DIV WNTMI YA +EAIEL QM G PN TT
Sbjct: 190 MYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTT 249
>ref|XP_002318172.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222858845|gb|EEE96392.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 617
Score = 62.4 bits (150), Expect = 1e-07
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKTT 131
MY CG +G+ R +FD + +RD+V WN+MI Y+ EAI L ++M G P++ T
Sbjct: 172 MYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMT 231
Query: 130 XXQI-GTCG 107
+ G CG
Sbjct: 232 LVSVLGACG 240
>ref|XP_006360814.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Solanum tuberosum]
Length = 723
Score = 62.4 bits (150), Expect = 1e-07
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -1
Query: 313 GMYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNKT 134
GMY NCG + RL+FD++ ERDIV W+ MI Y L D+ + LL +M S V P+
Sbjct: 164 GMYANCGHIQDARLVFDKMSERDIVAWDIMIDGYCQNGLFDDVLVLLEEMRSSNVEPDSR 223
Query: 133 TXXQI-GTCGSESKFFI 86
I CG I
Sbjct: 224 VFTTILSACGQTGNLAI 240
>gb|KHN37122.1| Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 687
Score = 62.0 bits (149), Expect = 2e-07
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = -1
Query: 310 MYVNCGGLGYGRLIFDRVKERDIVCWNTMIKSYANKVLLDEAIELLLQMHSYGVNPNK 137
MY G L RL+FD+++ +D+V W+TMI+SY LLDEA++LL MH V P++
Sbjct: 54 MYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSE 111