BLASTX nr result

ID: Cinnamomum24_contig00026763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00026763
         (355 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010268919.1| PREDICTED: 5' exonuclease Apollo [Nelumbo nu...    61   3e-07
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...    59   1e-06
ref|XP_012083904.1| PREDICTED: 5' exonuclease Apollo isoform X2 ...    58   3e-06
ref|XP_012083903.1| PREDICTED: 5' exonuclease Apollo isoform X1 ...    58   3e-06
gb|KDP28043.1| hypothetical protein JCGZ_19741 [Jatropha curcas]       58   3e-06
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...    57   4e-06
ref|XP_011079043.1| PREDICTED: LOW QUALITY PROTEIN: 5' exonuclea...    57   7e-06

>ref|XP_010268919.1| PREDICTED: 5' exonuclease Apollo [Nelumbo nucifera]
          Length = 439

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
 Frame = +1

Query: 1   EFIKFIKPAKMRGIVSSSVCYVNPSYYFRDLCEDSRDHQQ----VNQSSESVGVIQSESV 168
           EFIK ++P+K+RGIVSSS  Y NP Y+F  LC  S+  +Q    V +  E+   +Q++S 
Sbjct: 332 EFIKLVQPSKIRGIVSSSFSYTNPLYHFSHLCGVSQLPEQLGKKVQKEEENARTVQTKSA 391

Query: 169 SGCNKSNVARGRKSSD-KVSGLGXXXXXXXXXXXXXXGARIAEMDS 303
            GC++    + ++    K   L               GA+I EMD+
Sbjct: 392 IGCSEYRETKPKRDRTLKAGNLRVYRSRISVLRRVRCGAKIVEMDN 437


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = +1

Query: 1   EFIKFIKPAKMRGIVSSSVCYVNPSYYFRDLCEDSRDHQQVNQSSESVGVIQSESVSGCN 180
           EFI+ ++P  M+GIVSSS CY+NP YYF  LC ++   Q++    E   V+  ++ S C 
Sbjct: 330 EFIELVQPTSMKGIVSSSSCYINPVYYFGRLCRENWSAQRMRDKYEKKEVVDVQTKSYCG 389

Query: 181 K 183
           K
Sbjct: 390 K 390


>ref|XP_012083904.1| PREDICTED: 5' exonuclease Apollo isoform X2 [Jatropha curcas]
          Length = 414

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
 Frame = +1

Query: 1   EFIKFIKPAKMRGIVSSSVCYVNPSYYFRDLCEDSRDHQQV------NQSSESVGVIQSE 162
           EFI+ ++P  ++GIVSSS CY +P YYF  LC D+R  +++       +  + +  +Q++
Sbjct: 313 EFIELVQPTSIKGIVSSSSCYADPLYYFGRLCGDNRQSERLCYKQGKKEDGKRMIAVQTK 372

Query: 163 SVSGCNKSNVARGRKSSDKVSGLGXXXXXXXXXXXXXXGARIAEMDST 306
           S SG  KS  A  ++  ++VS +               GA++ E DS+
Sbjct: 373 SYSGNVKSTGAIRKRRKERVSRV-------RVLRRLHCGAKVEENDSS 413


>ref|XP_012083903.1| PREDICTED: 5' exonuclease Apollo isoform X1 [Jatropha curcas]
          Length = 431

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
 Frame = +1

Query: 1   EFIKFIKPAKMRGIVSSSVCYVNPSYYFRDLCEDSRDHQQV------NQSSESVGVIQSE 162
           EFI+ ++P  ++GIVSSS CY +P YYF  LC D+R  +++       +  + +  +Q++
Sbjct: 330 EFIELVQPTSIKGIVSSSSCYADPLYYFGRLCGDNRQSERLCYKQGKKEDGKRMIAVQTK 389

Query: 163 SVSGCNKSNVARGRKSSDKVSGLGXXXXXXXXXXXXXXGARIAEMDST 306
           S SG  KS  A  ++  ++VS +               GA++ E DS+
Sbjct: 390 SYSGNVKSTGAIRKRRKERVSRV-------RVLRRLHCGAKVEENDSS 430


>gb|KDP28043.1| hypothetical protein JCGZ_19741 [Jatropha curcas]
          Length = 326

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
 Frame = +1

Query: 1   EFIKFIKPAKMRGIVSSSVCYVNPSYYFRDLCEDSRDHQQV------NQSSESVGVIQSE 162
           EFI+ ++P  ++GIVSSS CY +P YYF  LC D+R  +++       +  + +  +Q++
Sbjct: 225 EFIELVQPTSIKGIVSSSSCYADPLYYFGRLCGDNRQSERLCYKQGKKEDGKRMIAVQTK 284

Query: 163 SVSGCNKSNVARGRKSSDKVSGLGXXXXXXXXXXXXXXGARIAEMDST 306
           S SG  KS  A  ++  ++VS +               GA++ E DS+
Sbjct: 285 SYSGNVKSTGAIRKRRKERVSRV-------RVLRRLHCGAKVEENDSS 325


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|731409947|ref|XP_010657378.1| PREDICTED: 5'
           exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
 Frame = +1

Query: 1   EFIKFIKPAKMRGIVSSSVCYVNPSYYFRDLCEDSRDHQQVNQSS---ESVGVIQSESVS 171
           +FIK ++P  ++GIVSSS CY+ P YYF  LC  +   Q++ + S   E    I++++ S
Sbjct: 331 DFIKLVQPINIKGIVSSSFCYIEPLYYFGGLCGVNPSSQRLPRKSERREKYENIEAKTKS 390

Query: 172 GCNKSNVARGRKSSDKVSGLGXXXXXXXXXXXXXXGARIAEMDS 303
               SN         K+  LG              G +I E DS
Sbjct: 391 NSGSSNFTDAENRKRKIDFLGSHLRRVSILRRAQRGVKIVENDS 434


>ref|XP_011079043.1| PREDICTED: LOW QUALITY PROTEIN: 5' exonuclease Apollo [Sesamum
           indicum]
          Length = 420

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
 Frame = +1

Query: 1   EFIKFIKPAKMRGIVSSSVCYVNPSYYFRDLCEDSRDHQQVNQSSES----VGVIQSESV 168
           EFI+ ++P K++GIV+SS CY++P YYF  LC   +   ++N+  E+     GV  +E  
Sbjct: 313 EFIELLRPVKIKGIVASSSCYIDPCYYFDHLCGTKQAFWRINRKLENDEEICGVEAAEIK 372

Query: 169 SGCNKSNVARGRKSS-DKVSGLGXXXXXXXXXXXXXXGARIAEMD 300
                ++ A GRK   D+V   G              G +IA+ +
Sbjct: 373 PAAEVTSTATGRKRRIDQVDVFGIRVSRVSLLRRLGCGVKIADSE 417


Top