BLASTX nr result
ID: Cinnamomum24_contig00026166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00026166
(249 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010257842.1| PREDICTED: small subunit processome componen... 108 2e-21
ref|XP_008795691.1| PREDICTED: LOW QUALITY PROTEIN: U3 small nuc... 105 2e-20
ref|XP_010938573.1| PREDICTED: small subunit processome componen... 104 2e-20
ref|XP_009358138.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 103 7e-20
ref|XP_009358103.1| PREDICTED: U3 small nucleolar RNA-associated... 103 7e-20
ref|XP_009358102.1| PREDICTED: U3 small nucleolar RNA-associated... 103 7e-20
ref|XP_008377595.1| PREDICTED: small subunit processome componen... 102 1e-19
ref|XP_008377594.1| PREDICTED: small subunit processome componen... 102 1e-19
ref|XP_008377593.1| PREDICTED: small subunit processome componen... 102 1e-19
ref|XP_011466726.1| PREDICTED: small subunit processome componen... 102 1e-19
ref|XP_011466725.1| PREDICTED: small subunit processome componen... 102 1e-19
ref|XP_009399347.1| PREDICTED: small subunit processome componen... 101 2e-19
ref|XP_008228625.1| PREDICTED: small subunit processome componen... 100 3e-19
ref|XP_008228596.1| PREDICTED: small subunit processome componen... 100 3e-19
ref|XP_007034248.1| ARM repeat superfamily protein, putative [Th... 99 9e-19
ref|XP_012455020.1| PREDICTED: small subunit processome componen... 99 1e-18
gb|KJB68808.1| hypothetical protein B456_011G152900 [Gossypium r... 99 1e-18
gb|KJB68807.1| hypothetical protein B456_011G152900 [Gossypium r... 99 1e-18
gb|KJB68806.1| hypothetical protein B456_011G152900 [Gossypium r... 99 1e-18
gb|KJB68805.1| hypothetical protein B456_011G152900 [Gossypium r... 99 1e-18
>ref|XP_010257842.1| PREDICTED: small subunit processome component 20 homolog [Nelumbo
nucifera]
Length = 2710
Score = 108 bits (269), Expect = 2e-21
Identities = 52/79 (65%), Positives = 65/79 (82%)
Frame = -2
Query: 239 SQKC*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNG 60
SQ C + +C NVV+LL S+ESTPLSISTSRK+++LISRIQM LSAG+ SEAY L+ NG
Sbjct: 698 SQLCCAELQCHNVVQLL-SIESTPLSISTSRKIVVLISRIQMDLSAGRISEAYAPLLLNG 756
Query: 59 IIGILNKRFGYLWEPAIEC 3
+IGI + RFG+LWEP +EC
Sbjct: 757 VIGIFHNRFGHLWEPTLEC 775
>ref|XP_008795691.1| PREDICTED: LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated
protein 20-like [Phoenix dactylifera]
Length = 2722
Score = 105 bits (261), Expect = 2e-20
Identities = 49/74 (66%), Positives = 61/74 (82%)
Frame = -2
Query: 224 EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGIL 45
EDT+C NV+ELLL E+TP+S+STSRK+ ILISRIQMGLS+ ++ YI L+ GIIGIL
Sbjct: 700 EDTQCPNVIELLLLAETTPISVSTSRKITILISRIQMGLSSATINDGYIPLLLYGIIGIL 759
Query: 44 NKRFGYLWEPAIEC 3
+ RFG LWEPA+EC
Sbjct: 760 HNRFGLLWEPALEC 773
>ref|XP_010938573.1| PREDICTED: small subunit processome component 20 homolog [Elaeis
guineensis]
Length = 2721
Score = 104 bits (260), Expect = 2e-20
Identities = 49/74 (66%), Positives = 61/74 (82%)
Frame = -2
Query: 224 EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGIL 45
EDT+C NV+ELLL E+TP+S+STSRK+ ILISRIQMGLS+ ++ YI L+ GIIGIL
Sbjct: 700 EDTQCPNVIELLLLAETTPISVSTSRKITILISRIQMGLSSATVNDGYIPLLLYGIIGIL 759
Query: 44 NKRFGYLWEPAIEC 3
+ RFG LWEPA+EC
Sbjct: 760 HNRFGLLWEPALEC 773
>ref|XP_009358138.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component
20 homolog, partial [Pyrus x bretschneideri]
Length = 2392
Score = 103 bits (256), Expect = 7e-20
Identities = 52/79 (65%), Positives = 60/79 (75%)
Frame = -2
Query: 239 SQKC*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNG 60
S C D NV+ LLLS+ESTPLSISTSRKV +LISRIQM LSAG+ +EAY+ LV NG
Sbjct: 358 SPTCHVDKHSLNVLALLLSIESTPLSISTSRKVTLLISRIQMALSAGRIAEAYLPLVLNG 417
Query: 59 IIGILNKRFGYLWEPAIEC 3
+IGI + RF YLW PA EC
Sbjct: 418 MIGIFHNRFSYLWNPASEC 436
>ref|XP_009358103.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like
isoform X2 [Pyrus x bretschneideri]
Length = 2721
Score = 103 bits (256), Expect = 7e-20
Identities = 52/79 (65%), Positives = 60/79 (75%)
Frame = -2
Query: 239 SQKC*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNG 60
S C D NV+ LLLS+ESTPLSISTSRKV +LISRIQM LSAG+ +EAY+ LV NG
Sbjct: 693 SPTCHVDKHSLNVLALLLSIESTPLSISTSRKVTLLISRIQMALSAGRIAEAYLPLVLNG 752
Query: 59 IIGILNKRFGYLWEPAIEC 3
+IGI + RF YLW PA EC
Sbjct: 753 MIGIFHNRFSYLWNPASEC 771
>ref|XP_009358102.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like
isoform X1 [Pyrus x bretschneideri]
Length = 2723
Score = 103 bits (256), Expect = 7e-20
Identities = 52/79 (65%), Positives = 60/79 (75%)
Frame = -2
Query: 239 SQKC*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNG 60
S C D NV+ LLLS+ESTPLSISTSRKV +LISRIQM LSAG+ +EAY+ LV NG
Sbjct: 693 SPTCHVDKHSLNVLALLLSIESTPLSISTSRKVTLLISRIQMALSAGRIAEAYLPLVLNG 752
Query: 59 IIGILNKRFGYLWEPAIEC 3
+IGI + RF YLW PA EC
Sbjct: 753 MIGIFHNRFSYLWNPASEC 771
>ref|XP_008377595.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Malus domestica]
Length = 2722
Score = 102 bits (254), Expect = 1e-19
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = -2
Query: 230 C*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIG 51
C D + NV+ LLLS+ESTPLSISTSRKV +LISRIQM LSAG+ +EAY+ LV NG+IG
Sbjct: 695 CHVDKQGLNVLALLLSIESTPLSISTSRKVTLLISRIQMALSAGRIAEAYLPLVLNGMIG 754
Query: 50 ILNKRFGYLWEPAIEC 3
I + RF YLW PA EC
Sbjct: 755 IFHNRFSYLWNPASEC 770
>ref|XP_008377594.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Malus domestica]
Length = 2723
Score = 102 bits (254), Expect = 1e-19
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = -2
Query: 230 C*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIG 51
C D + NV+ LLLS+ESTPLSISTSRKV +LISRIQM LSAG+ +EAY+ LV NG+IG
Sbjct: 696 CHVDKQGLNVLALLLSIESTPLSISTSRKVTLLISRIQMALSAGRIAEAYLPLVLNGMIG 755
Query: 50 ILNKRFGYLWEPAIEC 3
I + RF YLW PA EC
Sbjct: 756 IFHNRFSYLWNPASEC 771
>ref|XP_008377593.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Malus domestica]
Length = 2724
Score = 102 bits (254), Expect = 1e-19
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = -2
Query: 230 C*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIG 51
C D + NV+ LLLS+ESTPLSISTSRKV +LISRIQM LSAG+ +EAY+ LV NG+IG
Sbjct: 697 CHVDKQGLNVLALLLSIESTPLSISTSRKVTLLISRIQMALSAGRIAEAYLPLVLNGMIG 756
Query: 50 ILNKRFGYLWEPAIEC 3
I + RF YLW PA EC
Sbjct: 757 IFHNRFSYLWNPASEC 772
>ref|XP_011466726.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Fragaria vesca subsp. vesca]
Length = 2667
Score = 102 bits (253), Expect = 1e-19
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = -2
Query: 221 DTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGILN 42
D + NV++LLLS+ESTPLSI TSRKV +LISRIQMGLSAG+ SEAY+ LV NG+IGI +
Sbjct: 691 DNKDLNVLQLLLSIESTPLSICTSRKVTLLISRIQMGLSAGRISEAYLPLVLNGMIGIFH 750
Query: 41 KRFGYLWEPAIEC 3
RF +LW PA EC
Sbjct: 751 NRFSHLWNPASEC 763
>ref|XP_011466725.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Fragaria vesca subsp. vesca]
Length = 2684
Score = 102 bits (253), Expect = 1e-19
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = -2
Query: 221 DTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGILN 42
D + NV++LLLS+ESTPLSI TSRKV +LISRIQMGLSAG+ SEAY+ LV NG+IGI +
Sbjct: 708 DNKDLNVLQLLLSIESTPLSICTSRKVTLLISRIQMGLSAGRISEAYLPLVLNGMIGIFH 767
Query: 41 KRFGYLWEPAIEC 3
RF +LW PA EC
Sbjct: 768 NRFSHLWNPASEC 780
>ref|XP_009399347.1| PREDICTED: small subunit processome component 20 homolog [Musa
acuminata subsp. malaccensis]
Length = 2711
Score = 101 bits (251), Expect = 2e-19
Identities = 46/80 (57%), Positives = 66/80 (82%)
Frame = -2
Query: 242 ESQKC*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFN 63
ES+ ++C +V+ELLLSVE TPLSISTSRK++IL+S++QM LS+G+ ++ YI L+ N
Sbjct: 691 ESEASVVASQCIDVIELLLSVEMTPLSISTSRKIVILLSKLQMSLSSGRINDIYIPLLLN 750
Query: 62 GIIGILNKRFGYLWEPAIEC 3
GIIGIL+ RF ++WEPA++C
Sbjct: 751 GIIGILHNRFSHIWEPALDC 770
>ref|XP_008228625.1| PREDICTED: small subunit processome component 20 homolog [Prunus
mume]
Length = 2725
Score = 100 bits (250), Expect = 3e-19
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = -2
Query: 239 SQKC*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNG 60
S C D + NV+ LLLS+ESTPLSISTSRKV +LISRIQM LS+G+ +EAY+ LV NG
Sbjct: 698 SPTCHVDNQGLNVLPLLLSIESTPLSISTSRKVTLLISRIQMALSSGRIAEAYLPLVLNG 757
Query: 59 IIGILNKRFGYLWEPAIEC 3
+IGI + RF YLW P EC
Sbjct: 758 MIGIFHNRFSYLWNPTSEC 776
>ref|XP_008228596.1| PREDICTED: small subunit processome component 20 homolog [Prunus
mume]
Length = 2723
Score = 100 bits (250), Expect = 3e-19
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = -2
Query: 221 DTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGILN 42
D NV+ LLLS+ESTPLSISTSRKV +LISRIQMG+SAG+ +EAY+ LV NG+IGI +
Sbjct: 701 DNHGFNVLPLLLSIESTPLSISTSRKVTLLISRIQMGISAGRIAEAYLPLVLNGMIGIFH 760
Query: 41 KRFGYLWEPAIEC 3
RF YLW P EC
Sbjct: 761 NRFSYLWNPTSEC 773
>ref|XP_007034248.1| ARM repeat superfamily protein, putative [Theobroma cacao]
gi|508713277|gb|EOY05174.1| ARM repeat superfamily
protein, putative [Theobroma cacao]
Length = 2725
Score = 99.4 bits (246), Expect = 9e-19
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = -2
Query: 239 SQKC*EDTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNG 60
SQ C T+ SNV+ LLLS+E+T LSI TSRKV +LISRIQMGLS G+ SE Y+ LV NG
Sbjct: 697 SQACIVATDDSNVLRLLLSIEATSLSIFTSRKVTLLISRIQMGLSPGRISETYVPLVLNG 756
Query: 59 IIGILNKRFGYLWEPAIEC 3
IIGI + RF Y+W+ A EC
Sbjct: 757 IIGIFHNRFSYIWDAASEC 775
>ref|XP_012455020.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Gossypium raimondii]
Length = 2724
Score = 99.0 bits (245), Expect = 1e-18
Identities = 47/73 (64%), Positives = 60/73 (82%)
Frame = -2
Query: 221 DTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGILN 42
DT+ SNV++LL+S+E+TPLSISTSRKV +LIS+IQ GLSAG+ + Y+ LV NGIIGI +
Sbjct: 703 DTDESNVLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFH 762
Query: 41 KRFGYLWEPAIEC 3
RF YLW+ A EC
Sbjct: 763 NRFSYLWDAASEC 775
>gb|KJB68808.1| hypothetical protein B456_011G152900 [Gossypium raimondii]
Length = 2712
Score = 99.0 bits (245), Expect = 1e-18
Identities = 47/73 (64%), Positives = 60/73 (82%)
Frame = -2
Query: 221 DTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGILN 42
DT+ SNV++LL+S+E+TPLSISTSRKV +LIS+IQ GLSAG+ + Y+ LV NGIIGI +
Sbjct: 699 DTDESNVLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFH 758
Query: 41 KRFGYLWEPAIEC 3
RF YLW+ A EC
Sbjct: 759 NRFSYLWDAASEC 771
>gb|KJB68807.1| hypothetical protein B456_011G152900 [Gossypium raimondii]
Length = 2655
Score = 99.0 bits (245), Expect = 1e-18
Identities = 47/73 (64%), Positives = 60/73 (82%)
Frame = -2
Query: 221 DTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGILN 42
DT+ SNV++LL+S+E+TPLSISTSRKV +LIS+IQ GLSAG+ + Y+ LV NGIIGI +
Sbjct: 634 DTDESNVLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFH 693
Query: 41 KRFGYLWEPAIEC 3
RF YLW+ A EC
Sbjct: 694 NRFSYLWDAASEC 706
>gb|KJB68806.1| hypothetical protein B456_011G152900 [Gossypium raimondii]
Length = 2668
Score = 99.0 bits (245), Expect = 1e-18
Identities = 47/73 (64%), Positives = 60/73 (82%)
Frame = -2
Query: 221 DTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGILN 42
DT+ SNV++LL+S+E+TPLSISTSRKV +LIS+IQ GLSAG+ + Y+ LV NGIIGI +
Sbjct: 647 DTDESNVLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFH 706
Query: 41 KRFGYLWEPAIEC 3
RF YLW+ A EC
Sbjct: 707 NRFSYLWDAASEC 719
>gb|KJB68805.1| hypothetical protein B456_011G152900 [Gossypium raimondii]
Length = 2080
Score = 99.0 bits (245), Expect = 1e-18
Identities = 47/73 (64%), Positives = 60/73 (82%)
Frame = -2
Query: 221 DTECSNVVELLLSVESTPLSISTSRKVIILISRIQMGLSAGKFSEAYILLVFNGIIGILN 42
DT+ SNV++LL+S+E+TPLSISTSRKV +LIS+IQ GLSAG+ + Y+ LV NGIIGI +
Sbjct: 59 DTDESNVLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFH 118
Query: 41 KRFGYLWEPAIEC 3
RF YLW+ A EC
Sbjct: 119 NRFSYLWDAASEC 131