BLASTX nr result

ID: Cinnamomum24_contig00025268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00025268
         (265 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012449510.1| PREDICTED: protein transport protein Sec24-l...    59   1e-06
emb|CDP10979.1| unnamed protein product [Coffea canephora]             57   4e-06

>ref|XP_012449510.1| PREDICTED: protein transport protein Sec24-like At4g32640 isoform
           X2 [Gossypium raimondii]
          Length = 1106

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/110 (33%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
 Frame = -1

Query: 265 PMMTGPRVPPLNLRGQSMPPASTPLYGPQMWQMHPEQGASST------------------ 140
           P+   P   P +   Q+ PP     YGPQ W M P+QGA +                   
Sbjct: 257 PVQPMPSASPFSAVPQARPPPPGSPYGPQTWPMQPQQGAQAPPIPGSTQAQPPRMFGMPQ 316

Query: 139 ----INSNQIPHPTQSFSLAATETSQNYQAQTFAPVTRDYIIIEIGN*SP 2
               I+ NQIP P  S S    ET Q   A    P T DYI+ + GN SP
Sbjct: 317 PPTKIDPNQIPRPIPSSSPIVYETRQGNSANPPPPATSDYIVRDTGNCSP 366


>emb|CDP10979.1| unnamed protein product [Coffea canephora]
          Length = 1081

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/88 (39%), Positives = 42/88 (47%)
 Frame = -1

Query: 265 PMMTGPRVPPLNLRGQSMPPASTPLYGPQMWQMHPEQGASSTINSNQIPHPTQSFSLAAT 86
           P + G   PP   R   MPP + P+ G  M          S I+ NQIP P  S S+   
Sbjct: 279 PSVPGSVQPP---RMYGMPPPAGPVLGQSMAHTGAAVSGQSKIDPNQIPRPIPSSSVILH 335

Query: 85  ETSQNYQAQTFAPVTRDYIIIEIGN*SP 2
           ET QN QA    P T DYI+ + GN SP
Sbjct: 336 ETRQNNQANPPPPATSDYIVRDTGNCSP 363


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