BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00025056
         (596 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011626235.1| PREDICTED: pentatricopeptide repeat-containi...   148   2e-33
ref|XP_012455782.1| PREDICTED: pentatricopeptide repeat-containi...   141   3e-31
gb|KJB07716.1| hypothetical protein B456_001G040600 [Gossypium r...   141   3e-31
gb|KNA12201.1| hypothetical protein SOVF_127900 [Spinacia oleracea]   139   1e-30
ref|XP_010112543.1| hypothetical protein L484_007553 [Morus nota...   138   2e-30
ref|XP_008788449.1| PREDICTED: pentatricopeptide repeat-containi...   137   6e-30
ref|XP_008337322.1| PREDICTED: pentatricopeptide repeat-containi...   137   6e-30
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...   136   7e-30
ref|XP_010100941.1| hypothetical protein L484_005950 [Morus nota...   136   9e-30
ref|XP_009368815.1| PREDICTED: pentatricopeptide repeat-containi...   136   9e-30
ref|XP_008242732.1| PREDICTED: pentatricopeptide repeat-containi...   136   9e-30
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...   135   1e-29
ref|XP_004236840.1| PREDICTED: pentatricopeptide repeat-containi...   135   2e-29
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu...   135   2e-29
gb|AEP33772.1| organelle transcript processing 82, partial [Drab...   135   2e-29
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc...   135   2e-29
gb|AEP33760.1| organelle transcript processing 82, partial [Caps...   135   2e-29
ref|XP_011629250.1| PREDICTED: pentatricopeptide repeat-containi...   134   3e-29
gb|AEP33771.1| organelle transcript processing 82, partial [Thla...   134   3e-29
gb|AEP33764.1| organelle transcript processing 82, partial [Iber...   134   3e-29

>ref|XP_011626235.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Amborella trichopoda]
          Length = 542

 Score =  148 bits (374), Expect = 2e-33
 Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 36/217 (16%)
 Frame = -1

Query: 560 PTILSCSSLNHLNQIRAHLLKT-----------------------------------PPN 486
           P +  C+ + HL QI AH + T                                    P 
Sbjct: 20  PLLERCTYMKHLKQIHAHTIITGFARFSFVISRIMAFCAVSDMGDVGFARLIFDQIEKPT 79

Query: 485 LFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVH 309
           +F WN++IR Y  S+ P+  +H +++ML + VL PNKHTF FV+RAC    +L +G+ +H
Sbjct: 80  IFNWNTMIRGYSKSNNPKMGVHFYLQMLSEGVL-PNKHTFPFVIRACTGLGSLFLGKSIH 138

Query: 308 GVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIG 129
             ++K G +SD Y+ + LI LY+ C  +E ARQVFDRM  R LV  +++V GY   G + 
Sbjct: 139 IHIVKHGFESDLYVNSALIKLYSSCGDIEYARQVFDRMSFRNLVIYSSLVSGYCACGHVD 198

Query: 128 DARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLF 18
           +AR VF+ + E++EV+W+A+ISGYA++   +EA+ LF
Sbjct: 199 EAREVFNEMSERNEVVWSAMISGYAQNGCFQEAIDLF 235


>ref|XP_012455782.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Gossypium raimondii]
          Length = 736

 Score =  141 bits (355), Expect = 3e-31
 Identities = 71/163 (43%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIRYQS-SHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PN  +WN++IR  S S  P+ A+  +VKM+   +L PN +TF FVL++C +  + ++GEQ
Sbjct: 93  PNQVIWNTMIRGLSLSSTPELAMEFYVKMIWSGIL-PNSYTFPFVLKSCTKMDSTQVGEQ 151

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           VHG VLK GLDSD ++   LI +YA  S++  AR VFD+ P+R  VS TA++ GY+  G 
Sbjct: 152 VHGQVLKLGLDSDAFVHTSLINMYAQTSQLGKARLVFDKSPLRDAVSYTALITGYISIGY 211

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           +  AR +FD +  +D V W A+I+GY ++ Q E+AL  F+ ++
Sbjct: 212 MESARELFDEIPVRDVVSWNAMIAGYVQAGQYEDALAFFKEMI 254



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN +I  Y      + AL LF +ML+  +  P   TF  +L ACA   AL +G+ +H  +
Sbjct: 331 WNVMIGGYTHMSCHKEALGLFQRMLQSNI-EPTDVTFLSILPACASLGALDLGKWIHAYI 389

Query: 299 LKSGLDSD-CYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDA 123
            K+   SD   I   LI +YA C  +E A+QVF+ M  R L S  AM+ G    G    A
Sbjct: 390 DKNIQYSDNISIWTSLIDMYAKCGSIEAAQQVFNSMKHRSLASWNAMISGLAMHGLAEKA 449

Query: 122 RGVFDGVKEK----DEVLWTAIIS 63
             +F  +  +    D + +  ++S
Sbjct: 450 LELFSRMTNEGYKPDNITFVGVLS 473



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL  F +M+E  V+ PN+ T   VL  CA++ +L +G+ V   +
Sbjct: 230 WNAMIAGYVQAGQYEDALAFFKEMIEANVV-PNESTLVTVLSGCAQSGSLEMGKWVRSWI 288

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              G   + +I   LI +Y+ C  ++ A  +F+ +  R ++S   M+ GY       +A 
Sbjct: 289 DDHGFGFNIHIVNALIDMYSKCGDLDTALDLFEGLEQRDVISWNVMIGGYTHMSCHKEAL 348

Query: 119 GVF 111
           G+F
Sbjct: 349 GLF 351


>gb|KJB07716.1| hypothetical protein B456_001G040600 [Gossypium raimondii]
          Length = 709

 Score =  141 bits (355), Expect = 3e-31
 Identities = 71/163 (43%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIRYQS-SHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PN  +WN++IR  S S  P+ A+  +VKM+   +L PN +TF FVL++C +  + ++GEQ
Sbjct: 93  PNQVIWNTMIRGLSLSSTPELAMEFYVKMIWSGIL-PNSYTFPFVLKSCTKMDSTQVGEQ 151

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           VHG VLK GLDSD ++   LI +YA  S++  AR VFD+ P+R  VS TA++ GY+  G 
Sbjct: 152 VHGQVLKLGLDSDAFVHTSLINMYAQTSQLGKARLVFDKSPLRDAVSYTALITGYISIGY 211

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           +  AR +FD +  +D V W A+I+GY ++ Q E+AL  F+ ++
Sbjct: 212 MESARELFDEIPVRDVVSWNAMIAGYVQAGQYEDALAFFKEMI 254



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN +I  Y      + AL LF +ML+  +  P   TF  +L ACA   AL +G+ +H  +
Sbjct: 331 WNVMIGGYTHMSCHKEALGLFQRMLQSNI-EPTDVTFLSILPACASLGALDLGKWIHAYI 389

Query: 299 LKSGLDSD-CYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDA 123
            K+   SD   I   LI +YA C  +E A+QVF+ M  R L S  AM+ G    G    A
Sbjct: 390 DKNIQYSDNISIWTSLIDMYAKCGSIEAAQQVFNSMKHRSLASWNAMISGLAMHGLAEKA 449

Query: 122 RGVFDGVKEK----DEVLWTAIIS 63
             +F  +  +    D + +  ++S
Sbjct: 450 LELFSRMTNEGYKPDNITFVGVLS 473



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL  F +M+E  V+ PN+ T   VL  CA++ +L +G+ V   +
Sbjct: 230 WNAMIAGYVQAGQYEDALAFFKEMIEANVV-PNESTLVTVLSGCAQSGSLEMGKWVRSWI 288

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              G   + +I   LI +Y+ C  ++ A  +F+ +  R ++S   M+ GY       +A 
Sbjct: 289 DDHGFGFNIHIVNALIDMYSKCGDLDTALDLFEGLEQRDVISWNVMIGGYTHMSCHKEAL 348

Query: 119 GVF 111
           G+F
Sbjct: 349 GLF 351


>gb|KNA12201.1| hypothetical protein SOVF_127900 [Spinacia oleracea]
          Length = 737

 Score =  139 bits (349), Expect = 1e-30
 Identities = 71/163 (43%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIRYQS-SHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PN  +WN++IR QS S  P  AL L+++ML   V  PN +TF F+ + CA+    R G+Q
Sbjct: 94  PNTLVWNTVIRGQSLSSSPMGALDLYIRMLFSDV-EPNSYTFPFIFKCCAKLGKTREGKQ 152

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK GLDSD ++   LI +YA    ++ AR+VFD+  +R  VS TA++ GY   G 
Sbjct: 153 IHGHVLKFGLDSDAFVHTSLINMYAQNGELDCARKVFDKSHLRDPVSFTALISGYASKGY 212

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           + DAR +FD +  KD V W A+I+GY +SDQ ++++  F+ +L
Sbjct: 213 LDDARKLFDEIPVKDVVSWNAMIAGYVQSDQFDKSIAFFQEML 255



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
 Frame = -1

Query: 488 NLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQV 312
           +L  WN +I  Y      + AL LF +ML   V+ PN  TF  VL ACA   AL  G+ +
Sbjct: 328 DLISWNVMIGGYTHGSYYKEALSLFREMLGLQVV-PNDVTFLSVLPACAHLGALDYGKWI 386

Query: 311 HGVVLKSGLD-SDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           H  + ++    ++  +   LI +YA C  +E A+QVFDRM  + L S  A++ G    G 
Sbjct: 387 HAYIDRNFNHLTNIALSTSLINMYAKCGDIEAAKQVFDRMKTKSLASWNALISGLAMHGD 446

Query: 134 IGDARGVF----DGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
              A  +F    D     D++ +  ++S   ++   +   + F  ++
Sbjct: 447 ATHALDLFLRMVDEGFRPDDITFVGVLSACTQAGLVDHGRKYFNSMI 493


>ref|XP_010112543.1| hypothetical protein L484_007553 [Morus notabilis]
           gi|587947715|gb|EXC33996.1| hypothetical protein
           L484_007553 [Morus notabilis]
          Length = 465

 Score =  138 bits (348), Expect = 2e-30
 Identities = 77/187 (41%), Positives = 114/187 (60%), Gaps = 5/187 (2%)
 Frame = -1

Query: 563 SPTILSCSSLNHLNQI----RAHLLKTPPNLFLWNSIIR-YQSSHLPQTALHLFVKMLED 399
           S  ILS S+L+HL  +    R     + P  F WN++IR Y  +  P  ++ +FV+M +D
Sbjct: 24  SSKILSFSALSHLGNVDYSFRFLSQLSSPTTFDWNTVIRGYSKTRNPNRSISVFVRMSKD 83

Query: 398 PVLNPNKHTFTFVLRACARNLALRIGEQVHGVVLKSGLDSDCYIQAGLIGLYAGCSRVEL 219
               P++ T  F+ +A A  L  ++GE VH V+ K G +SD +IQ+ LI +YA C  ++ 
Sbjct: 84  G-FTPDQFTCLFLTKASASLLHRKLGETVHAVIAKHGYESDIFIQSSLIHMYASCGDIQY 142

Query: 218 ARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDARGVFDGVKEKDEVLWTAIISGYARSDQP 39
           AR+VFD+M  R LVS TAM+DGY K G +  AR VF+ + E+D V W+++I GY ++   
Sbjct: 143 ARKVFDKMTQRNLVSWTAMLDGYAKCGDVKSAREVFELMPERDVVSWSSLIDGYVKAGDY 202

Query: 38  EEALRLF 18
            EAL LF
Sbjct: 203 SEALALF 209


>ref|XP_008788449.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Phoenix dactylifera]
          Length = 523

 Score =  137 bits (344), Expect = 6e-30
 Identities = 70/165 (42%), Positives = 109/165 (66%), Gaps = 4/165 (2%)
 Frame = -1

Query: 500 KTP-PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALR 327
           +TP P+ F +N++IR +  SHLP+ ALHLF KML D    P+K TF  +L+ACA+  AL 
Sbjct: 57  QTPLPSSFHYNTLIRAHTQSHLPEAALHLFQKMLSDCRTPPDKFTFPLILKACAQLSALD 116

Query: 326 IGEQVHGVVLKSGL--DSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDG 153
            GEQ+H ++LKS      D Y+   L+ +YA C R++ A+++FD MP R +V+   M+DG
Sbjct: 117 EGEQIHCMILKSQSVPADDVYVATSLVRMYAQCRRMDKAQRLFDGMPNRNVVAWNTMIDG 176

Query: 152 YLKAGRIGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLF 18
           ++K   +  AR +FD + E++ V W +++ GY R++ P EAL++F
Sbjct: 177 FVKYSDMNSARRIFDEMPERNVVSWNSLMGGYVRNELPHEALKIF 221


>ref|XP_008337322.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Malus domestica]
          Length = 736

 Score =  137 bits (344), Expect = 6e-30
 Identities = 82/219 (37%), Positives = 118/219 (53%), Gaps = 37/219 (16%)
 Frame = -1

Query: 563 SPTILS-CSSLNHLNQIRAHLLKTP----------------------------------- 492
           S T+LS C S+ +L Q+  H++KT                                    
Sbjct: 33  SLTLLSKCKSIQNLKQVHTHIVKTGLHNXHFALSKLIEFCAVSPFGDLSYALSVFESIEN 92

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PN  +WN+IIR Y  S  P  A+  +V+M+   V  PN +TF F+L++C +  A   G+Q
Sbjct: 93  PNQIVWNTIIRGYSLSSRPLEAVEFYVRMILSGV-EPNSYTFPFLLKSCTKTAATHEGKQ 151

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           VHG V+K GL+SD ++   LI +YA    +  AR VFD+  +R  VS TA++ GY+  G 
Sbjct: 152 VHGHVVKLGLESDAFVHTSLINMYAQNGELVSARXVFDKSHLRDAVSFTALISGYVSRGC 211

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLF 18
           + DAR +FD +  +D V W A+ISGYA+ D+ EEAL LF
Sbjct: 212 MDDARVLFDEIPVRDVVSWNAMISGYAQRDRFEEALALF 250



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y      + AL LF +M +  V +PN+ T   VL ACA++ +L +G+ V   +
Sbjct: 230 WNAMISGYAQRDRFEEALALFGEMRKANV-SPNESTMVTVLSACAQSGSLELGKWVASWI 288

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGY 150
              GL S+  + + LI +Y+ C  +++AR +FD +  R ++S   M+ GY
Sbjct: 289 EDHGLGSNLRLVSALIDMYSKCGALDIARGLFDGLQQRDVISWNVMIGGY 338


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
           gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08070, chloroplastic; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING 82; Flags: Precursor
           gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
           [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
           chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score =  136 bits (343), Expect = 7e-30
 Identities = 72/163 (44%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PNL +WN++ R +  S  P +AL L+V M+   +L PN +TF FVL++CA++ A + G+Q
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEGQQ 155

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK G D D Y+   LI +Y    R+E A +VFD+ P R +VS TA++ GY   G 
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           I +A+ +FD +  KD V W A+ISGYA +   +EAL LF+ ++
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y   +L + AL LF +ML      PN  T   +L ACA   A+ IG  +H  +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 299 LK--SGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGD 126
            K   G+ +   ++  LI +YA C  +E A QVF+ +  + L S  AM+ G+   GR   
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 125 ARGVFDGVK----EKDEVLWTAIISGYARSDQPEEALRLFR 15
           +  +F  ++    + D++ +  ++S  + S   +    +FR
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL LF  M++  V  P++ T   V+ ACA++ ++ +G QVH  +
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNV-RPDESTMVTVVSACAQSGSIELGRQVHLWI 292

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGY 150
              G  S+  I   LI LY+ C  +E A  +F+R+P + ++S   ++ GY
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342


>ref|XP_010100941.1| hypothetical protein L484_005950 [Morus notabilis]
           gi|587897770|gb|EXB86239.1| hypothetical protein
           L484_005950 [Morus notabilis]
          Length = 737

 Score =  136 bits (342), Expect = 9e-30
 Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 36/213 (16%)
 Frame = -1

Query: 545 CSSLNHLNQIRAHLLKT-----------------------------------PPNLFLWN 471
           C SL  L QI  H++KT                                    PN F+WN
Sbjct: 41  CKSLQTLKQIHTHIIKTGLHKTQFALSKLVEFCSLSPFGDLSYALAILDTIEEPNRFIWN 100

Query: 470 SIIRYQSSHL-PQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVVLK 294
           +++R  S    P  A+  +V+M+   V  PN HTF  +L+ C +  A   G+Q+H  +L+
Sbjct: 101 TVLRGHSLRSDPAKAIDFYVRMVVSGV-EPNSHTFPVILKCCTKFGAAHEGKQLHAQILR 159

Query: 293 SGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDARGV 114
            GLD+D +I   LI +YA    ++ AR VFD+ PVR  VS TA++ GY   GR+ +ARG+
Sbjct: 160 LGLDADVFISTSLINMYAQNGMLDNARLVFDKSPVRNAVSFTALITGYALRGRMEEARGI 219

Query: 113 FDGVKEKDEVLWTAIISGYARSDQPEEALRLFR 15
           FD +  +D V W AIISGY +S Q +EAL  F+
Sbjct: 220 FDEMPTRDVVAWNAIISGYTQSAQFDEALAFFK 252



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN+II  Y  S     AL  F +M++  V  PN+ +F  +L ACA++  L  G  V   +
Sbjct: 231 WNAIISGYTQSAQFDEALAFFKEMVKANV-KPNESSFVVILSACAQSGNLESGNWVRSWI 289

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              GL S   I   L+ +Y+ C  ++ AR +FD +  R +VS   M+ GY       +A 
Sbjct: 290 GDRGLGSSLRIVNALVDMYSKCGNLDTARDLFDGLRERNVVSWNIMIGGYTHMSDYKEAL 349

Query: 119 GVF 111
            +F
Sbjct: 350 ALF 352



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
 Frame = -1

Query: 488 NLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQV 312
           N+  WN +I  Y      + AL LF  ML   V  PN  T   VL ACA   AL +G+ +
Sbjct: 328 NVVSWNIMIGGYTHMSDYKEALALFRLMLRSDV-EPNDVTLLAVLPACAHLGALDLGKWI 386

Query: 311 HGVVLKS-GLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           H  + K     ++  +   LI +YA    ++ A+QVFD M +R L S  AM+ G    G 
Sbjct: 387 HAYIDKKFHTFTNNSLWTSLIDMYAKSGNIDAAKQVFDGMEIRSLASWNAMISGLAVHGH 446

Query: 134 IGDARGVFDGVKEK----DEVLWTAIIS 63
              A  +F  + ++    D++ + A++S
Sbjct: 447 ASLAFELFSKMTDEGFKPDDISFVAVLS 474


>ref|XP_009368815.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Pyrus x bretschneideri]
          Length = 736

 Score =  136 bits (342), Expect = 9e-30
 Identities = 82/219 (37%), Positives = 120/219 (54%), Gaps = 37/219 (16%)
 Frame = -1

Query: 563 SPTILS-CSSLNHLNQIRAHLLKTP----------------------------------- 492
           S T+LS C S+ +L Q+  H++KT                                    
Sbjct: 33  SLTLLSKCKSIQNLKQVHTHIIKTGLHNTHFALSKLVEFCAVSPFGDLSYALSVFESIEN 92

Query: 491 PNLFLWNSIIRYQS-SHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PN  +WN+IIR  S S  P  A+  +V+M+   V  PN +TF F+L++CA+  A   G+Q
Sbjct: 93  PNQIVWNTIIRGHSLSSRPIEAVEFYVRMILSGV-EPNSYTFPFLLKSCAKTAATHEGKQ 151

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           VHG V+K GL+SD ++   LI +YA    ++ AR VFD+  +R  VS TA++ GY+  G 
Sbjct: 152 VHGHVVKLGLESDAFVHTSLINMYAQNGELDSARLVFDKSLLRDAVSFTALISGYVSRGC 211

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLF 18
           + DAR +FD +  +D V W A+ISGYA+ ++ EEAL LF
Sbjct: 212 MDDARVLFDEIPVRDVVSWNAMISGYAQRERFEEALALF 250



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y      + AL LF +M +  V +PN+ T   VL ACA++ +L +G+ V   +
Sbjct: 230 WNAMISGYAQRERFEEALALFGEMRKANV-SPNESTMVTVLSACAQSGSLELGKWVASWI 288

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              GL S+  + + LI +Y+ C  +++AR +FD +  R ++S   M+ GY       +A 
Sbjct: 289 EDHGLGSNLRLISALIDMYSKCGALDIARGLFDGLQERDVISWNVMIGGYTHKSHYKEAL 348

Query: 119 GVF 111
            +F
Sbjct: 349 MLF 351



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN +I  Y      + AL LF  ML      PN  TF  +L ACA   AL +G+ +H  +
Sbjct: 331 WNVMIGGYTHKSHYKEALMLFRLMLRSNT-EPNDVTFLGILPACAHLGALDLGKWIHAYI 389

Query: 299 LKSGLD-SDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDA 123
            K+    ++  +   LI +YA C  +E A+QVF+ M  + L S  AM+ G    G    A
Sbjct: 390 DKNFQKFTNTCLWTSLIDMYAKCGNIEAAKQVFNGMETKSLASWNAMISGLAMHGDALAA 449

Query: 122 RGVFDGVKEK----DEVLWTAIIS 63
             +F  ++++    D + +  ++S
Sbjct: 450 LELFSKMEDEGFNPDAITFVGVLS 473


>ref|XP_008242732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Prunus mume]
          Length = 739

 Score =  136 bits (342), Expect = 9e-30
 Identities = 83/219 (37%), Positives = 120/219 (54%), Gaps = 37/219 (16%)
 Frame = -1

Query: 563 SPTILS-CSSLNHLNQIRAHLLKTP----------------------------------- 492
           S T+LS C ++ +L Q+ AH++KT                                    
Sbjct: 36  SLTLLSKCKNMQNLKQVHAHIIKTGLHNTHFALSKLVEFCAVSPFGDLSYALLVFQSIEN 95

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PN  +WN+IIR +  S  P  A+  +V ML   V  PN +TF F+L++CA+  A    +Q
Sbjct: 96  PNQIIWNTIIRGFSLSSKPIQAVEFYVMMLLSGV-EPNSYTFPFLLKSCAKFEASHEAKQ 154

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK GLDSD ++   LI +YA    ++ AR VFD+   R +VS TA++ GY+ +G 
Sbjct: 155 IHGHVLKLGLDSDAFVHTSLINMYAQNGELDNARLVFDKSSFRDVVSFTALITGYVSSGC 214

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLF 18
           + DAR +FD +  +D V W A+ISGYA+S + EEAL LF
Sbjct: 215 MDDARHLFDEIPVRDVVSWNAMISGYAQSGRFEEALALF 253



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  S   + AL LF +M +  V +PN+ T   VL ACA++ +L +G+ V   +
Sbjct: 233 WNAMISGYAQSGRFEEALALFSEMRKANV-SPNESTMVVVLSACAQSGSLELGKWVGSWI 291

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              GL S+  +   LI +YA C  ++ AR +FD +  R ++S   M+ GY       +A 
Sbjct: 292 ENRGLGSNLRLVNALIDMYAKCGALDTARSLFDGLQQRDVISWNVMIGGYTHKSHYKEAL 351

Query: 119 GVF 111
            +F
Sbjct: 352 ALF 354



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN +I  Y      + AL LF  ML     +PN  TF  +L AC+   AL +G+ +H  +
Sbjct: 334 WNVMIGGYTHKSHYKEALALFRLMLRSNT-DPNDVTFLGILPACSHLGALDLGKWIHAYI 392

Query: 299 LKSGLD-SDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDA 123
            K+    ++  +   LI +YA C  +E A+QVF+ M  + L S  AM+ G    G    A
Sbjct: 393 DKNFQSLTNTSLWTSLIDMYAKCGNIEAAKQVFNGMEAKSLASWNAMISGLAMHGHAHTA 452

Query: 122 RGVFDGVKEK----DEVLWTAIIS 63
             +F  +  +    DE+ +  ++S
Sbjct: 453 LELFSKMANEGFKPDEITFVGVLS 476


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  135 bits (341), Expect = 1e-29
 Identities = 72/163 (44%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PNL +WN++ R +  S  P +AL L+V M+   +L PN +TF F+L++CA++ A + G+Q
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFLLKSCAKSKAFKEGQQ 155

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK G D D ++   LI +Y    R+E AR+VFDR P R +VS TA++ GY   G 
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           I  A+ +FD +  KD V W A+ISGYA +   +EAL LF+ ++
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMM 258



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y   +L + AL LF +ML      PN  T   +L ACA   A+ IG  +H  +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGE-RPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 299 ---LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIG 129
              LKS  ++   ++  LI +YA C  +E A QVF+ +  + L S  AM+ G+   GR  
Sbjct: 394 DKRLKSATNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452

Query: 128 DARGVFDGVK----EKDEVLWTAIISGYARSDQPEEALRLFR 15
            A  +F  ++    E D++ +  ++S  +RS   +    +FR
Sbjct: 453 AAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFR 494



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL LF +M++  +  P++ T   V+ ACA++ ++ +G QVH  +
Sbjct: 234 WNAMISGYAETGNYKEALELFKEMMKTNI-RPDESTMVTVVSACAQSGSIELGRQVHSWI 292

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              G  S+  I   L+ LY+ C  +E A  +F                            
Sbjct: 293 DDHGFGSNLKIVNSLMDLYSKCGELETACGLF---------------------------- 324

Query: 119 GVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
              +G+  KD + W  +I GY   +  +EAL LF+ +L
Sbjct: 325 ---EGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359


>ref|XP_004236840.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
           [Solanum lycopersicum] gi|723689806|ref|XP_010319323.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305 [Solanum lycopersicum]
          Length = 559

 Score =  135 bits (340), Expect = 2e-29
 Identities = 80/192 (41%), Positives = 113/192 (58%), Gaps = 5/192 (2%)
 Frame = -1

Query: 578 RRINLSPTILSCSSLNHLNQI----RAHLLKTPPNLFLWNSIIR-YQSSHLPQTALHLFV 414
           +    S  IL  ++L+  + I    R  L    P +F +N++IR Y SS  P  +L LFV
Sbjct: 44  KETQFSSRILCFTALSDSSSIDYAHRVFLQIKTPTIFDYNALIRGYSSSKNPCKSLSLFV 103

Query: 413 KMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVVLKSGLDSDCYIQAGLIGLYAGC 234
           +ML++ V  PN  T+ FV++  A+   +RIG  VHG VLK+G D D Y+   LI +Y  C
Sbjct: 104 EMLQNEVF-PNYFTYPFVVKCLAKLSEVRIGRSVHGGVLKNGFDVDLYVSNSLIHMYGSC 162

Query: 233 SRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDARGVFDGVKEKDEVLWTAIISGYA 54
             V  AR+VFD MPVR LVS  +M+DGY K G +   R VFD + E+D V W+++I GY 
Sbjct: 163 GDVLCARKVFDEMPVRNLVSWNSMMDGYGKCGDVVLMREVFDSMIERDVVSWSSLIDGYV 222

Query: 53  RSDQPEEALRLF 18
           +  +  EAL +F
Sbjct: 223 KDGEYAEALAMF 234


>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  135 bits (339), Expect = 2e-29
 Identities = 72/163 (44%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PNL +WN++ R +  S  P +AL+L+V M+   +L PN +TF F+L++CA++ A R G+Q
Sbjct: 51  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLL-PNCYTFPFLLKSCAKSKAFREGQQ 109

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK G D D Y+   LI +Y    R+E AR+VFD+   R +VS TA++ GY   G 
Sbjct: 110 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 169

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           I  A+ +FD +  KD V W A+ISGYA +   +EAL LF+ ++
Sbjct: 170 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 212



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y   +L + AL LF +ML     +PN  T   +L ACA   A+ IG  +H  +
Sbjct: 289 WNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSILPACAHLGAIEIGRWIHVYI 347

Query: 299 LK--SGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGD 126
            K   G+ +    +  LI +YA C  +E A+QVFD +  R L S  AM+ G+   GR   
Sbjct: 348 NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA 407

Query: 125 ARGVFDGVK----EKDEVLWTAIISGYARSDQPEEALRLFRGV 9
           A  +F  ++    E D++ +  ++S  + S   +    +FR +
Sbjct: 408 AFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 450



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL LF +M++  V  P++ T   V+ ACA++ ++ +G QVH  +
Sbjct: 188 WNAMISGYAETGNNKEALELFKEMMKTNV-RPDESTMVSVVSACAQSASIELGRQVHSWI 246

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              G  S+  I   LI LY  C  VE A  +F+                           
Sbjct: 247 DDHGFGSNLKIVNALIDLYIKCGEVETACGLFE--------------------------- 279

Query: 119 GVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
               G+  KD + W  +I GY   +  +EAL LF+ +L
Sbjct: 280 ----GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML 313


>gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
          Length = 526

 Score =  135 bits (339), Expect = 2e-29
 Identities = 72/163 (44%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PNL +WN++ R +  S  P +AL+L+V M+   +L PN +TF F+L++CA++ A R G+Q
Sbjct: 51  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLL-PNCYTFPFLLKSCAKSKAFREGQQ 109

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK G D D Y+   LI +Y    R+E AR+VFD+   R +VS TA++ GY   G 
Sbjct: 110 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGY 169

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           I +A+ +FD +  KD V W A+ISGYA +   +EAL LF+ ++
Sbjct: 170 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 212



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y   +L + AL LF +ML     +PN  T   +L ACA   A+ IG  +H  +
Sbjct: 289 WNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSILPACAHLGAIDIGRWIHVYI 347

Query: 299 LK--SGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGD 126
            K   G+ +   +   LI +YA C  +E A+QVFD M  R L S  AM+ G+   G+   
Sbjct: 348 NKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANA 407

Query: 125 ARGVFDGVK----EKDEVLWTAIISGYARSDQPEEALRLFRGV 9
           A  +F  ++    + D++ +  ++S  + S   +    +FR +
Sbjct: 408 AFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSM 450



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL LF  M++  V  P++ T   V+ ACA++ ++ +G QVH  +
Sbjct: 188 WNAMISGYAETGNYKEALELFKDMMKTNV-RPDESTMVTVVSACAQSGSIELGRQVHLWI 246

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              G  S+  I   LI LY+ C  VE A  +F+                           
Sbjct: 247 DDHGFGSNLKIVNALIDLYSKCGEVETACGLFE--------------------------- 279

Query: 119 GVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
               G+  KD + W  +I GY   +  +EAL LF+ +L
Sbjct: 280 ----GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML 313


>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  135 bits (339), Expect = 2e-29
 Identities = 72/163 (44%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PNL +WN++ R +  S  P +AL+L+V M+   +L PN +TF F+L++CA++ A R G+Q
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLL-PNCYTFPFLLKSCAKSKAFREGQQ 124

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK G D D Y+   LI +Y    R+E AR+VFD+   R +VS TA++ GY   G 
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           I  A+ +FD +  KD V W A+ISGYA +   +EAL LF+ ++
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 227



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y   +L + AL LF +ML     +PN  T   +L ACA   A+ IG  +H  +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSILPACAHLGAIEIGRWIHVYI 362

Query: 299 LK--SGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGD 126
            K   G+ +    +  LI +YA C  +E A+QVFD +  R L S  AM+ G+   GR   
Sbjct: 363 NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA 422

Query: 125 ARGVFDGVK----EKDEVLWTAIISGYARSDQPEEALRLFRGV 9
           A  +F  ++    E D++ +  ++S  + S   +    +FR +
Sbjct: 423 AFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL LF +M++  V  P++ T   V+ ACA++ ++ +G QVH  +
Sbjct: 203 WNAMISGYAETGNNKEALELFKEMMKTNV-RPDESTMVSVVSACAQSASIELGRQVHSWI 261

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              G  S+  I   LI LY  C  VE A  +F+                           
Sbjct: 262 DDHGFGSNLKIVNALIDLYIKCGEVETACGLFE--------------------------- 294

Query: 119 GVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
               G+  KD + W  +I GY   +  +EAL LF+ +L
Sbjct: 295 ----GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML 328


>gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  135 bits (339), Expect = 2e-29
 Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PNL +WN++ R +  S  P +AL+L+V M+   ++ PN +TF F+L+ACA++ A R G+Q
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLV-PNSYTFPFLLKACAKSKAFREGQQ 124

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK G D D Y+   LI +Y    R E AR+VFD+   R +VS TA++ GY   G 
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           I  A+ +FD +  KD V W A+ISGYA +   +EAL LF+ ++
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMM 227



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y   +L + AL LF +ML     +PN+ T   +L ACA   A+ IG  +H  +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNEVTMLSILPACAHLGAIDIGRWIHVYI 362

Query: 299 LK--SGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGD 126
            K   G+ +   ++  LI +YA C  +E A+QVFD M  R L S  AM+ G+   GR   
Sbjct: 363 DKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANP 422

Query: 125 ARGVF-----DGVKEKDEVLWTAIISGYARSDQPEEALRLFRGV 9
           A  +F     DG+ E D++ +  ++S  + S   +    +FR +
Sbjct: 423 AFDIFSRMRKDGI-EPDDITFVGLLSACSHSGMLDLGRHIFRSM 465



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL LF +M++  V  P++ T   VL ACA++ ++ +G QVH  +
Sbjct: 203 WNALISGYAETGNYKEALELFKEMMKTNV-KPDESTMVTVLSACAQSASIELGRQVHSWI 261

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              G  S+  I   LI LY  C  VE A  +F+                           
Sbjct: 262 DDHGFGSNLKIVNALIDLYIKCGEVETASGLFE--------------------------- 294

Query: 119 GVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
               G+  KD + W  +I GY   +  +EAL LF+ +L
Sbjct: 295 ----GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML 328


>ref|XP_011629250.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Amborella trichopoda]
          Length = 491

 Score =  134 bits (338), Expect = 3e-29
 Identities = 73/192 (38%), Positives = 121/192 (63%), Gaps = 2/192 (1%)
 Frame = -1

Query: 572 INLSPTILSCSSLNHLNQ-IRAHLLKTPPNLFLWNSIIR-YQSSHLPQTALHLFVKMLED 399
           +++S  I +CS L +LN       LK  PN++L+N++IR +  SH  + ++ LF + +  
Sbjct: 11  LSVSKFISTCSLLGYLNHGYTLFSLKKDPNIYLYNTMIRAFSQSHSAKESIVLFDR-IRL 69

Query: 398 PVLNPNKHTFTFVLRACARNLALRIGEQVHGVVLKSGLDSDCYIQAGLIGLYAGCSRVEL 219
              +P+ ++F FVL+ACA   A++ G ++H  V++ G  SD ++Q GLI +Y+ CS +  
Sbjct: 70  MGFSPDTYSFPFVLKACAHLSAIKEGREIHAQVIRVGFGSDVHVQTGLIHMYSNCSVLLD 129

Query: 218 ARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDARGVFDGVKEKDEVLWTAIISGYARSDQP 39
           AR++FD M  R L+S  AM+ GY K G I  A  +F+ + E++ + WTA+ISGYA+ ++ 
Sbjct: 130 ARRLFDEMSHRDLISWNAMIAGYAKLGDIDTAHEIFEQMDERNVISWTAVISGYAQMNRS 189

Query: 38  EEALRLFRGVLL 3
            EA+ LFR + L
Sbjct: 190 NEAISLFRRMQL 201


>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  134 bits (338), Expect = 3e-29
 Identities = 71/163 (43%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PN  +WN+++R Y  S  P +AL L+V M+   +L PN +TF F+L++CA++ A   G+Q
Sbjct: 29  PNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLL-PNSYTFPFLLKSCAKSKAFEEGQQ 87

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK G + D Y+   LI +YA   R+E A +VFDR   R +VS TA++ GY  +G 
Sbjct: 88  IHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGN 147

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           I  A+ +FD +  KD V W A+ISGYA +   +EAL LF+ ++
Sbjct: 148 IRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM 190



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y   +L + AL LF +ML     +PN  T   +L ACA   A+ IG  +H  +
Sbjct: 267 WNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTIVSILPACAHLGAIDIGRWIHVYI 325

Query: 299 LKSGLD--SDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGD 126
            K   D  +   ++  LI +YA C  +E A QVF+ M  + L S  AM+ G+   GR   
Sbjct: 326 DKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANA 385

Query: 125 ARGVFDGVK----EKDEVLWTAIISGYARSDQPEEALRLFRGV 9
              +F  ++    E D++ +  ++S  + S + +    +F+ +
Sbjct: 386 GFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSM 428



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL LF +M++  V  P++ T   VL ACA++ ++ +G QVH  +
Sbjct: 166 WNAMISGYAETGSYKEALELFKEMMKTNV-RPDEGTMVTVLSACAQSRSVELGRQVHSWI 224

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGDAR 120
              G  S+  I   LI LY+ C +VE A  +F+                           
Sbjct: 225 DDHGFGSNLKIVNALIDLYSKCGQVETACGLFE--------------------------- 257

Query: 119 GVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
               G+  KD V W  +I GY   +  +EAL LF+ +L
Sbjct: 258 ----GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEML 291


>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  134 bits (338), Expect = 3e-29
 Identities = 71/163 (43%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 PNLFLWNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQ 315
           PNL +WN++ R +  S  P +AL L+V M+   +L PN +TF F+L++CA++ A + G+Q
Sbjct: 54  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFLLKSCAKSKAFKEGQQ 112

Query: 314 VHGVVLKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGR 135
           +HG VLK G D D Y+   LI +Y    R+E A +VFD  P R +VS TA++ GY   G 
Sbjct: 113 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGY 172

Query: 134 IGDARGVFDGVKEKDEVLWTAIISGYARSDQPEEALRLFRGVL 6
           I +A+ +FD +  KD V W A+ISGYA +   +EAL LF+ ++
Sbjct: 173 IENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 215



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y   +L + AL LF +ML      PN  T   +L ACA   A+ IG  +H  +
Sbjct: 292 WNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYI 350

Query: 299 LK--SGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGYLKAGRIGD 126
            K   G+ +   ++  LI +YA C  +E A QVF+ +  + L S  AM+ G+   GR   
Sbjct: 351 DKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 410

Query: 125 ARGVFDGVK----EKDEVLWTAIISGYARSDQPEEALRLFRGV 9
           +  +F  ++    E D++ +  ++S  + S   +    +FR +
Sbjct: 411 SFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 453



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = -1

Query: 476 WNSIIR-YQSSHLPQTALHLFVKMLEDPVLNPNKHTFTFVLRACARNLALRIGEQVHGVV 300
           WN++I  Y  +   + AL LF  M++  V  P++ T   V+ ACA++ ++ +G QVH  +
Sbjct: 191 WNAMISGYAETGNYKEALELFKDMMKTNV-RPDESTMVTVVSACAQSGSIELGRQVHSWI 249

Query: 299 LKSGLDSDCYIQAGLIGLYAGCSRVELARQVFDRMPVRGLVSSTAMVDGY 150
              G  S+  I   LI LY+ C  +E A  +F+ +P + ++S   ++ GY
Sbjct: 250 DDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGY 299