BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00024813
         (725 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008775862.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-41
ref|XP_010254272.1| PREDICTED: pentatricopeptide repeat-containi...   172   2e-40
ref|XP_010916776.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-37
ref|XP_009386141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   142   3e-31
ref|XP_008785475.1| PREDICTED: putative pentatricopeptide repeat...   113   1e-22
ref|XP_010259248.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-22
ref|XP_010925270.1| PREDICTED: putative pentatricopeptide repeat...   110   1e-21
ref|XP_009349981.1| PREDICTED: putative pentatricopeptide repeat...   108   3e-21
ref|XP_008220652.1| PREDICTED: pentatricopeptide repeat-containi...   108   3e-21
ref|XP_006300029.1| hypothetical protein CARUB_v10016253mg [Caps...   108   3e-21
ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prun...   108   4e-21
ref|XP_002884496.1| pentatricopeptide repeat-containing protein ...   108   4e-21
ref|XP_012079670.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-21
ref|XP_010263631.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-21
ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis th...   108   5e-21
ref|XP_007046897.1| Tetratricopeptide repeat (TPR)-like superfam...   108   5e-21
gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thal...   108   5e-21
ref|XP_009374255.1| PREDICTED: pentatricopeptide repeat-containi...   107   6e-21
ref|XP_008344823.1| PREDICTED: pentatricopeptide repeat-containi...   107   6e-21
ref|XP_008356438.1| PREDICTED: pentatricopeptide repeat-containi...   107   6e-21

>ref|XP_008775862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Phoenix dactylifera]
          Length = 456

 Score =  176 bits (446), Expect = 1e-41
 Identities = 89/149 (59%), Positives = 104/149 (69%)
 Frame = -3

Query: 447 MSYLYFHPKPLSRITTTWVQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLAS 268
           M YLYF  K        WV T HHQ II LL++CSKREEL QIH+QMIR+ LI DT   S
Sbjct: 1   MRYLYFQSKSSLPTNKRWV-TPHHQNIISLLQSCSKREELIQIHAQMIRSRLIEDTFYVS 59

Query: 267 RIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRG 88
           RII+F    S    +AY RRVFDQI QPN F+WN M++GY    +P DA+SLYK ML RG
Sbjct: 60  RIIAFLAAPSPRSSMAYARRVFDQIHQPNLFSWNSMIRGYANCDAPRDALSLYKLMLRRG 119

Query: 87  FSPDNYTYPVVTKACSHLRALELGEAIHG 1
           FSPD+YT+ VVTKAC+HL ALE GE + G
Sbjct: 120 FSPDSYTFAVVTKACAHLNALEAGETVRG 148



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 31/125 (24%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
 Frame = -3

Query: 369 IIFLLKNCSKREELDQ---IHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFD 199
           I+ L+  C +   LD+   +H ++I  G+  D  +A+ I++ +    +  + A    VF+
Sbjct: 228 IMSLISACGQLRALDKGRRLHLRIIENGMERDADVANSIMNMYAKCGSMRNAA---EVFE 284

Query: 198 QIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALEL 19
           ++P  N+ +WN ++ G+ +N    +A++++++M      PD  T      AC+ L  L+ 
Sbjct: 285 RMPVKNSISWNTLVGGFARNGLYKEALTMFQEMACSEVKPDEITIIGALSACAQLGDLQQ 344

Query: 18  GEAIH 4
           G+ +H
Sbjct: 345 GKLLH 349



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 29/108 (26%), Positives = 55/108 (50%)
 Frame = -3

Query: 327 DQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGY 148
           + +   +++ GL  D  + +  I+ + G     +V   R VFD++ + +  +W  M+ GY
Sbjct: 144 ETVRGSVLKCGLESDMFVMTGFINLYAGCG---EVNIAREVFDEMRRRDVVSWTSMLSGY 200

Query: 147 VQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGEAIH 4
            + +  ++A  L+ +M V G  P+  T   +  AC  LRAL+ G  +H
Sbjct: 201 ARVNRWDEAFLLFDEMRVTGIEPNKVTIMSLISACGQLRALDKGRRLH 248


>ref|XP_010254272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Nelumbo nucifera]
          Length = 675

 Score =  172 bits (437), Expect = 2e-40
 Identities = 87/149 (58%), Positives = 107/149 (71%)
 Frame = -3

Query: 447 MSYLYFHPKPLSRITTTWVQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLAS 268
           M YL F+ KP  R    WV+  + Q II L++NCSK E L QIH+Q IRTGLI DT + S
Sbjct: 1   MRYL-FNSKPSIR----WVE--YRQNIISLIQNCSKIEILHQIHAQTIRTGLIEDTFVVS 53

Query: 267 RIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRG 88
           RII+FF   ST F+V Y RR+FDQ+  PN F WN M++ Y Q  +P DA+ LYK+ML+RG
Sbjct: 54  RIIAFFTVPSTQFNVHYARRIFDQVHHPNLFIWNSMIRSYTQTCAPKDALLLYKEMLIRG 113

Query: 87  FSPDNYTYPVVTKACSHLRALELGEAIHG 1
           FSPDN+TYP+VTKACSHL ALE G  +HG
Sbjct: 114 FSPDNFTYPIVTKACSHLHALECGSLLHG 142



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
 Frame = -3

Query: 354 KNCSKREELD---QIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQP 184
           K CS    L+    +H Q++++G   D  + S +I F +  +    +   R++FD++P+ 
Sbjct: 126 KACSHLHALECGSLLHGQIVKSGFDSDMIIMSGLIHFNLCCAR---IGVARKLFDEMPER 182

Query: 183 NAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGEAIH 4
           +   W  M+ GY Q + P ++  L+ +M   G  P+N T   +  AC HL+AL  G+ +H
Sbjct: 183 DVVAWTTMISGYAQLNYPEESFLLFDEMRRAGVKPNNVTILSLISACGHLQALGRGKWLH 242



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 34/111 (30%), Positives = 59/111 (53%)
 Frame = -3

Query: 336 EELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMM 157
           +E  QIH+ +      +D  + + +I+ +     H D A    VF Q+P  + F+W  M+
Sbjct: 337 KEGKQIHTYLREKKFAYDVFIGNALINMYAKCG-HLDEAVD--VFRQMPDRDIFSWTTMI 393

Query: 156 QGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGEAIH 4
            GYVQ+    +A+ L+++M + G  P+  T   +  AC+ L AL+ G+ IH
Sbjct: 394 TGYVQDCQFKEALVLFQEMKLSGVEPNEVTLVSLLSACAQLGALDQGKHIH 444



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
 Frame = -3

Query: 369 IIFLLKNCSKREELDQ---IHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFD 199
           I+ L+  C   + L +   +HS ++   +  +  +A+ ++S +        ++Y   VFD
Sbjct: 222 ILSLISACGHLQALGRGKWLHSYIVENNMESNCIVANALVSMYAKCKI---MSYALEVFD 278

Query: 198 QIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALEL 19
            I   +  TWN ++ G+VQN  P +A+ L+K+M      P+  T      AC+ L  ++ 
Sbjct: 279 NILTRDVVTWNSLIGGFVQNGLPAEALRLFKEMQCSDVQPNEITVVSALSACAQLVNIKE 338

Query: 18  GEAIH 4
           G+ IH
Sbjct: 339 GKQIH 343


>ref|XP_010916776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16610-like [Elaeis guineensis]
          Length = 715

 Score =  162 bits (409), Expect = 3e-37
 Identities = 84/148 (56%), Positives = 98/148 (66%)
 Frame = -3

Query: 447 MSYLYFHPKPLSRITTTWVQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLAS 268
           M YLYF  K        WV   H+Q II LL++CSK EEL QIH+QMIRT LI DT  AS
Sbjct: 1   MRYLYFQSKSNLSTNKRWV-APHYQNIISLLRSCSKFEELIQIHAQMIRTRLIADTFFAS 59

Query: 267 RIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRG 88
           RII+F    S    + Y RRVFDQI QPN F WN M++GY  + SP  A+SLYK ML RG
Sbjct: 60  RIIAFLTAPSPQSSMVYARRVFDQIHQPNLFLWNSMIRGYTNHDSPRHALSLYKLMLRRG 119

Query: 87  FSPDNYTYPVVTKACSHLRALELGEAIH 4
            SPD YT+ VVT+AC+HL +LE GE  H
Sbjct: 120 SSPDCYTFAVVTRACAHLNSLETGETAH 147



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 29/105 (27%), Positives = 57/105 (54%)
 Frame = -3

Query: 318 HSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQN 139
           H+ +++ GL  D  + +  I+ + G     +++  R +FD++P+ +  +W  M+ GY Q 
Sbjct: 147 HASVVKRGLESDMFVMTGFINLYAGCG---EISIAREIFDEMPRRDVVSWTSMLSGYAQV 203

Query: 138 HSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGEAIH 4
           +  ++A  L+ +M + G  P+  T   +  AC  LRAL+ G  +H
Sbjct: 204 NRLDEAFLLFNEMRLTGVEPNMVTSMSLFSACGQLRALDQGRWLH 248



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
 Frame = -3

Query: 360 LLKNCSKREELDQ---IHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIP 190
           L   C +   LDQ   +H ++   G+  D  +A+ II+ +    +  D     RVF ++ 
Sbjct: 231 LFSACGQLRALDQGRWLHLRIAEAGMERDVDVANSIINMYAKCGSMLDAG---RVFKRMS 287

Query: 189 QPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGEA 10
             N+ +WN ++ G  QN    +A++++++M      PD  T      AC+ L  L+ G+ 
Sbjct: 288 VKNSVSWNTLVGGLAQNGLYKEALTVFQEMACSEVKPDEITVVSALSACAQLGDLQQGKL 347

Query: 9   IH 4
           +H
Sbjct: 348 LH 349


>ref|XP_009386141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g27110-like [Musa acuminata subsp.
           malaccensis]
          Length = 719

 Score =  142 bits (357), Expect = 3e-31
 Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
 Frame = -3

Query: 447 MSYLYFHPKPLSRITTTWVQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLAS 268
           M +L F PK        W+   H   I+ LL++CS +++L QIH++MIRT L+ DT   S
Sbjct: 1   MRHLCFEPKRFPATYEPWISRDHRSIILLLLQSCSSKQQLAQIHARMIRTRLVQDTFAVS 60

Query: 267 RIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLV-R 91
           RII+     S  F   Y RRVFDQIP PN F WN M++GY  + +P DA+S +K +L   
Sbjct: 61  RIIALLTSPSALFSTVYARRVFDQIPHPNLFMWNSMIRGYTHHRAPRDALSTFKLLLACG 120

Query: 90  GFSPDNYTYPVVTKACSHLRALELGEAIHG 1
           G SPD YTY    +AC+ L  L  G A+HG
Sbjct: 121 GSSPDTYTYAATARACAQLNNLPTGSAVHG 150



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 34/106 (32%), Positives = 56/106 (52%)
 Frame = -3

Query: 321 IHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQ 142
           +H  +++ G   D  + S IISF+ G     DVA  R++FD++P  +  +W  M+ GY+Q
Sbjct: 148 VHGLVMKCGFDSDMFVTSGIISFYNGCGK-VDVA--RQMFDEMPHKDVVSWTSMISGYLQ 204

Query: 141 NHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGEAIH 4
            +  ++   L+ +M   G  P+  T   +  AC   RALE G  +H
Sbjct: 205 LNQLDEGFRLFDEMRKVGVEPNKVTVMSLLSACGQSRALERGRRLH 250



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
 Frame = -3

Query: 369 IIFLLKNCSKREELDQ---IHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFD 199
           ++ LL  C +   L++   +HS+++  G   D  + + ++S +       D       F+
Sbjct: 230 VMSLLSACGQSRALERGRRLHSRILEHGWESDLAVGNSVVSMYAKCG---DTINAMDAFE 286

Query: 198 QIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALEL 19
           ++P  N  TWN +M G+V++    +A+S++++M      PD  T      AC+ L  L+ 
Sbjct: 287 KMPARNTATWNALMGGFVRSGHCREALSVFQEMTCSYTRPDEITMATALSACAQLGDLQQ 346

Query: 18  GEAIH 4
           G+ +H
Sbjct: 347 GKLVH 351


>ref|XP_008785475.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Phoenix dactylifera]
          Length = 763

 Score =  113 bits (283), Expect = 1e-22
 Identities = 57/142 (40%), Positives = 89/142 (62%), Gaps = 1/142 (0%)
 Frame = -3

Query: 426 PKPLSRITTTWVQTS-HHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFF 250
           P   + + +T +Q+S  + ++I +L+ C   +EL QIHSQMIRTGLI       R++SF 
Sbjct: 41  PPSSNSLASTHLQSSPQNHQLISILEQCRTMKELKQIHSQMIRTGLIRSPVERRRLLSFC 100

Query: 249 VGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNY 70
               +  ++ Y R +FD++P P+ F WN M++GY   H P  A+ +Y +ML RGF PD+Y
Sbjct: 101 CTQQSG-EMDYARLLFDEMPNPDLFDWNSMIRGYSNRHFPEAAVLVYVEMLARGFVPDDY 159

Query: 69  TYPVVTKACSHLRALELGEAIH 4
           T+P + KA +   A+ELG+ +H
Sbjct: 160 TFPFLLKAFTRDAAVELGDELH 181



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
 Frame = -3

Query: 363 FLLKNCSKREEL---DQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQI 193
           FLLK  ++   +   D++H+  ++ GL  + H+ + +I  +   ST  ++   R +F++ 
Sbjct: 163 FLLKAFTRDAAVELGDELHAHALKFGLSSNAHVRNALIRMY---STSGEIDTARELFERS 219

Query: 192 PQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGE 13
            + +A  WN M+ GY ++    +++ L++ M+     P   TY  V  AC+  + LE G 
Sbjct: 220 SKRDAVMWNAMISGYNRSKQFVESLKLFEGMMKASVPPTPVTYISVLSACARSKHLEYGA 279

Query: 12  AIHG 1
            IHG
Sbjct: 280 RIHG 283


>ref|XP_010259248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Nelumbo nucifera]
          Length = 678

 Score =  112 bits (281), Expect = 2e-22
 Identities = 54/131 (41%), Positives = 81/131 (61%)
 Frame = -3

Query: 393 VQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYG 214
           V TS+H   + LL++C+      QIH+QMIR  L  D+  AS++I F   S +  ++ Y 
Sbjct: 7   VLTSNHPTCLALLQSCTSMTHFLQIHAQMIRNLLFEDSFAASKLIEFCAVSDSG-NIHYA 65

Query: 213 RRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHL 34
           R++F QI  PN FTWN +++GY  +  P  ++ L+ QML  G  P+++T+P V KAC+HL
Sbjct: 66  RKIFSQISHPNTFTWNTILRGYANSPFPRPSLHLFNQMLKSGAKPNSFTFPSVIKACAHL 125

Query: 33  RALELGEAIHG 1
            A E G  +HG
Sbjct: 126 AAFEQGMQLHG 136


>ref|XP_010925270.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Elaeis guineensis]
          Length = 763

 Score =  110 bits (274), Expect = 1e-21
 Identities = 57/142 (40%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
 Frame = -3

Query: 426 PKPLSRITTTWVQTS-HHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFF 250
           P   + + +T +Q+S  + ++  +L  C   +EL QIHSQMIRTGLI       R++SF 
Sbjct: 41  PPSSNSLASTHLQSSPQNHQLTSILDQCKTMKELKQIHSQMIRTGLIRSPLERRRLLSFC 100

Query: 249 VGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNY 70
               +  D+ Y R +FD+IP P+ F WN M++G+   HSP+ A+ +Y +ML RGF PD+Y
Sbjct: 101 CTHQSG-DMDYARLLFDEIPNPDLFDWNSMIRGHSNRHSPDAAVLVYVEMLARGFVPDDY 159

Query: 69  TYPVVTKACSHLRALELGEAIH 4
           T P + KA +   A+ LG+ +H
Sbjct: 160 TLPFLLKAFTRDAAVGLGDELH 181



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 35/124 (28%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
 Frame = -3

Query: 363 FLLKNCSKREEL---DQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQI 193
           FLLK  ++   +   D++H+  ++ GL  + H+ + +I  +   ST  ++   R +F++ 
Sbjct: 163 FLLKAFTRDAAVGLGDELHAHALKFGLSSNAHVRNALIRMY---STSGEIDTARELFERS 219

Query: 192 PQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGE 13
            + +A  WN M+ GY ++    +++ L++ M+    +P   TY +V  AC+ L+ LE G 
Sbjct: 220 SKRDAVMWNAMISGYNRSKQFVESLKLFEGMVQATVTPTPVTYILVLSACARLKDLEYGA 279

Query: 12  AIHG 1
            IHG
Sbjct: 280 RIHG 283


>ref|XP_009349981.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Pyrus x bretschneideri]
          Length = 548

 Score =  108 bits (271), Expect = 3e-21
 Identities = 47/126 (37%), Positives = 79/126 (62%)
 Frame = -3

Query: 381 HHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVF 202
           H + I+ LL+ C +  EL QIH  MI T ++++    SR++ F   S    D+ Y ++VF
Sbjct: 4   HQKTILSLLEKCRRMSELKQIHGLMITTSVVNNVIQLSRLVDFCTNSEAR-DLGYAKKVF 62

Query: 201 DQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALE 22
            QI QP+ + WN M++GY  + +P +++ +Y++ML RG+ PDN+T+P V K+CS +    
Sbjct: 63  QQISQPSVYIWNSMIRGYSNSENPVESLIMYREMLQRGYLPDNFTFPFVLKSCSVIADYR 122

Query: 21  LGEAIH 4
            G+ +H
Sbjct: 123 YGKCVH 128


>ref|XP_008220652.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Prunus mume]
          Length = 738

 Score =  108 bits (271), Expect = 3e-21
 Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
 Frame = -3

Query: 429 HPKPLSRITTTWVQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFF 250
           HP   S   +T ++ S H  +  L+  C+  ++L Q+H+QM+RTG + D + AS++I+  
Sbjct: 14  HPNSSSPSFSTDLRLSSHPALS-LIDQCTSIKQLKQVHAQMLRTGALFDPYSASKLITAS 72

Query: 249 VGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVR-GFSPDN 73
             SS    + Y R+VFDQIPQPN +TWN +++ Y  +  P ++I ++ +ML      PD 
Sbjct: 73  ALSSFS-SLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPAESILIFLEMLDHCSECPDK 131

Query: 72  YTYPVVTKACSHLRALELGEAIHG 1
           YTYP   KA S LRAL++G   HG
Sbjct: 132 YTYPFAIKAASELRALQVGRGFHG 155



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 31/101 (30%), Positives = 53/101 (52%)
 Frame = -3

Query: 318 HSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQN 139
           H   I+  L  D ++ + ++ F+ GS    D+A  RRVF + P+ +  +WN M+  + Q 
Sbjct: 154 HGMAIKASLGSDIYILNSLVHFY-GSCGDLDLA--RRVFVKTPKKDVVSWNSMITVFAQG 210

Query: 138 HSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELG 16
           + P +A+ L+K+M      P++ T   V  AC+    LE G
Sbjct: 211 NCPQEALELFKEMEAENVKPNDVTMVSVLSACAKKVDLEFG 251


>ref|XP_006300029.1| hypothetical protein CARUB_v10016253mg [Capsella rubella]
           gi|482568738|gb|EOA32927.1| hypothetical protein
           CARUB_v10016253mg [Capsella rubella]
          Length = 564

 Score =  108 bits (271), Expect = 3e-21
 Identities = 49/127 (38%), Positives = 81/127 (63%)
 Frame = -3

Query: 381 HHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVF 202
           H++ I+  L+NC    EL+Q+H  MI++ +I +    SR+I F   S    +++Y R VF
Sbjct: 4   HYKPILSQLENCRFMVELNQLHGLMIKSSVIRNVIPLSRVIDFCTTSPETMNLSYARSVF 63

Query: 201 DQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALE 22
           + I  P+ + WN M++GY  + +P+ A+  Y++ML +G+SPD +T+P V KACS LR ++
Sbjct: 64  ESIGCPSVYIWNSMIRGYSNSTNPDKALIFYEEMLRKGYSPDYFTFPYVLKACSGLRDVQ 123

Query: 21  LGEAIHG 1
            G  +HG
Sbjct: 124 FGSCVHG 130


>ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
           gi|462402068|gb|EMJ07625.1| hypothetical protein
           PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score =  108 bits (270), Expect = 4e-21
 Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
 Frame = -3

Query: 429 HPKPLSRITTTWVQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFF 250
           HP   S   +T ++ S H  +  L+  C+  ++L Q+H+QM+RTG++ D + AS++I+  
Sbjct: 14  HPNSSSPTFSTDLRFSSHPALS-LIDQCTSIKQLKQVHAQMLRTGVLFDPYSASKLITAS 72

Query: 249 VGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVR-GFSPDN 73
             SS    + Y R+VFDQIPQPN +TWN +++ Y  +  P ++I ++  ML      PD 
Sbjct: 73  ALSSFS-SLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPAESILVFLDMLDHCSECPDK 131

Query: 72  YTYPVVTKACSHLRALELGEAIHG 1
           YTYP   KA S LRAL++G   HG
Sbjct: 132 YTYPFAIKAASELRALQVGRGFHG 155



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 31/101 (30%), Positives = 53/101 (52%)
 Frame = -3

Query: 318 HSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQN 139
           H   I+  L  D ++ + ++ F+ GS    D+A  RRVF + P+ +  +WN M+  + Q 
Sbjct: 154 HGMAIKASLGSDIYILNSLVHFY-GSCGDLDLA--RRVFMKTPKKDVVSWNSMITVFAQG 210

Query: 138 HSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELG 16
           + P +A+ L+K+M      P++ T   V  AC+    LE G
Sbjct: 211 NCPQEALELFKEMEAENVKPNDVTMVSVLSACAKKVDLEFG 251


>ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330336|gb|EFH60755.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 547

 Score =  108 bits (270), Expect = 4e-21
 Identities = 48/127 (37%), Positives = 80/127 (62%)
 Frame = -3

Query: 381 HHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVF 202
           H++ I+  L+NC    EL+Q+H  MI++ +I +    SR+I F        +++Y R VF
Sbjct: 4   HYKPILSQLENCRSMVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVF 63

Query: 201 DQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALE 22
           + I  P+ + WN M++GY  + +P+ A+  Y++ML +G+SPD +T+P V KACS LR ++
Sbjct: 64  ESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQ 123

Query: 21  LGEAIHG 1
            G  +HG
Sbjct: 124 FGSCVHG 130


>ref|XP_012079670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Jatropha curcas]
          Length = 615

 Score =  108 bits (269), Expect = 5e-21
 Identities = 56/138 (40%), Positives = 85/138 (61%)
 Frame = -3

Query: 417 LSRITTTWVQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSS 238
           ++ + TT+   S   + + LL+ CS  EEL QIH+ M +TGL+ +T   S++++F V SS
Sbjct: 1   MASLPTTYSSMS---QTLSLLERCSNMEELKQIHAHMFKTGLVLETITVSKLVAF-VSSS 56

Query: 237 THFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPV 58
              +++Y R VFD+I +PN F WN M++GY  ++    A+ LY QML      + YT+P 
Sbjct: 57  NSGNISYARTVFDRISRPNTFMWNAMIRGYANSNKSEHALILYYQMLCHSIPHNVYTFPF 116

Query: 57  VTKACSHLRALELGEAIH 4
           + KACS L ALE  + IH
Sbjct: 117 LLKACSRLSALEEIQQIH 134



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 34/154 (22%)
 Frame = -3

Query: 363 FLLKNCSKR---EELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQI 193
           FLLK CS+    EE+ QIH+ +I+ G   D +  + ++  +  S +   +   + +FD+I
Sbjct: 116 FLLKACSRLSALEEIQQIHAYIIKLGFGSDIYSTNSLLHAYAASGS---IKSAQVLFDRI 172

Query: 192 PQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVR-------------------------- 91
            QP+  +WN M+ GY++ +    A  L++ M  R                          
Sbjct: 173 SQPDVVSWNSMIHGYMKCNDTETAYELFQDMPTRNAISYTAMISGYVQAGLHQEALKVFQ 232

Query: 90  -----GFSPDNYTYPVVTKACSHLRALELGEAIH 4
                G  PD      V  AC+HL AL+ G  IH
Sbjct: 233 EMQSAGIKPDRVELASVLSACAHLGALDQGRWIH 266


>ref|XP_010263631.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Nelumbo nucifera]
          Length = 626

 Score =  108 bits (269), Expect = 5e-21
 Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
 Frame = -3

Query: 429 HPKPLSRITTTWV-QTSHHQKI--IFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRII 259
           HP P++R+  T   Q     K+  + +L+ CS  EE+ QIH+Q+ +TGL+ D+   ++++
Sbjct: 4   HPIPMARLMLTPTNQFPLETKVQTLSVLERCSDMEEIKQIHAQLFKTGLVLDSTPVTKLL 63

Query: 258 SFFVGSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSP 79
           +F   +S   ++AY + VFD I QPN F WN M++GY  +  P  A+ LY QML     P
Sbjct: 64  TFSA-TSVSGNLAYAQLVFDSIQQPNIFMWNIMIRGYSNSKEPERALLLYHQMLRDSALP 122

Query: 78  DNYTYPVVTKACSHLRALELGEAIHG 1
           ++YT+P + KAC+ L ALE    IHG
Sbjct: 123 NHYTFPFLLKACATLSALEETRQIHG 148



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 34/160 (21%)
 Frame = -3

Query: 381 HHQKIIFLLKNC---SKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGR 211
           +H    FLLK C   S  EE  QIH Q+++TG   D + A+ +I  +  S +   +    
Sbjct: 123 NHYTFPFLLKACATLSALEETRQIHGQVLKTGFAIDIYAANSLIHAYAKSGS---LTSAH 179

Query: 210 RVFDQIPQPNAFTWNFMMQGY-------------------------------VQNHSPND 124
           R+FD++ + +  +WN M+ GY                               V++    +
Sbjct: 180 RLFDRVQERDIVSWNSMIDGYAKCGEREKAHELFTKMPRKNIISWTSMITACVRDGFFKE 239

Query: 123 AISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGEAIH 4
           A+S +  +   G  PD         AC+HL AL+ G  IH
Sbjct: 240 ALSFFYDLQNEGIKPDGVALVSTLSACAHLGALDQGRWIH 279


>ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
           gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g05240 gi|332640689|gb|AEE74210.1|
           mitochondrial editing factor 19 [Arabidopsis thaliana]
          Length = 565

 Score =  108 bits (269), Expect = 5e-21
 Identities = 48/127 (37%), Positives = 80/127 (62%)
 Frame = -3

Query: 381 HHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVF 202
           H++ I+  L+NC    EL+Q+H  MI++ +I +    SR+I F        +++Y R VF
Sbjct: 5   HYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVF 64

Query: 201 DQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALE 22
           + I  P+ + WN M++GY  + +P+ A+  Y++ML +G+SPD +T+P V KACS LR ++
Sbjct: 65  ESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQ 124

Query: 21  LGEAIHG 1
            G  +HG
Sbjct: 125 FGSCVHG 131



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
 Frame = -3

Query: 363 FLLKNCSKREELDQ---IHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQI 193
           ++LK CS   ++     +H  +++TG   + ++++ ++  ++      +V YG RVF+ I
Sbjct: 112 YVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG---EVNYGLRVFEDI 168

Query: 192 PQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELGE 13
           PQ N   W  ++ G+V N+  +DAI  +++M   G   +      +  AC   + +  G+
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228

Query: 12  AIHG 1
             HG
Sbjct: 229 WFHG 232


>ref|XP_007046897.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508699158|gb|EOX91054.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 529

 Score =  108 bits (269), Expect = 5e-21
 Identities = 54/127 (42%), Positives = 82/127 (64%)
 Frame = -3

Query: 384 SHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRV 205
           S+  + + +L+ CS+ EEL QIH+QM +TGL+ DT   SRI++F V S  + ++ Y + V
Sbjct: 16  SNATQTLSVLERCSRMEELKQIHAQMFKTGLVADTITVSRILTFCV-SPKYGNLEYAQMV 74

Query: 204 FDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRAL 25
           FD++ +PN F +N M++GY  N  P  A  LY+QML      ++YT+P + KACS L A+
Sbjct: 75  FDRVSRPNTFMYNTMIRGYSNNKEPEKAFLLYQQMLCHSVPHNSYTFPFLLKACSSLLAI 134

Query: 24  ELGEAIH 4
           E  + IH
Sbjct: 135 EETKQIH 141


>gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
          Length = 548

 Score =  108 bits (269), Expect = 5e-21
 Identities = 48/127 (37%), Positives = 80/127 (62%)
 Frame = -3

Query: 381 HHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVF 202
           H++ I+  L+NC    EL+Q+H  MI++ +I +    SR+I F        +++Y R VF
Sbjct: 5   HYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVF 64

Query: 201 DQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALE 22
           + I  P+ + WN M++GY  + +P+ A+  Y++ML +G+SPD +T+P V KACS LR ++
Sbjct: 65  ESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQ 124

Query: 21  LGEAIHG 1
            G  +HG
Sbjct: 125 FGSCVHG 131


>ref|XP_009374255.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Pyrus x bretschneideri]
          Length = 738

 Score =  107 bits (268), Expect = 6e-21
 Identities = 57/143 (39%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
 Frame = -3

Query: 426 PKPLSRITTTWVQTSHHQKIIFLLKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFV 247
           P P S   T  + +S+    +  + +C+  ++L Q+H+QM+RTGL+ D + AS++I+   
Sbjct: 16  PNPPSPTATNELFSSYPP--LSSIDHCTSIKQLKQVHAQMLRTGLLFDPYSASKLITVCA 73

Query: 246 GSSTHFDVAYGRRVFDQIPQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGF-SPDNY 70
            SS    + Y R+VFDQIPQPN ++WN +++ Y  +  P ++I ++ +ML R   SP+ +
Sbjct: 74  LSSFS-SLDYARQVFDQIPQPNLYSWNTLIRAYASSVDPTESILVFLEMLYRCMESPNKF 132

Query: 69  TYPVVTKACSHLRALELGEAIHG 1
           TYP V KA S LR LELG   HG
Sbjct: 133 TYPFVIKAASELRVLELGRGFHG 155



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
 Frame = -3

Query: 363 FLLKNCSKREELDQ---IHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQI 193
           F++K  S+   L+     H  +I+  L  D ++ + ++ F+ GS    D+A  RRVF + 
Sbjct: 136 FVIKAASELRVLELGRGFHGMVIKASLGSDVYILNSLVHFY-GSCGDLDLA--RRVFVKT 192

Query: 192 PQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELG 16
           P+ +  +WN M+  + Q + P +A+ L+K+M      P++ T   V  AC+    LE G
Sbjct: 193 PKKDVVSWNSMITAFTQGNCPEEALELFKEMETENVKPNDVTMVSVLSACAKKVDLEFG 251


>ref|XP_008344823.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Malus domestica]
          Length = 592

 Score =  107 bits (268), Expect = 6e-21
 Identities = 52/120 (43%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
 Frame = -3

Query: 357 LKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQPNA 178
           + +C+  ++L Q+H+QM+RTGL+ D + AS++I+    SS    + Y R+VFDQIPQPN 
Sbjct: 37  IDHCTNIKQLKQVHAQMLRTGLLFDPYSASKLITVCALSSFS-SLDYARQVFDQIPQPNL 95

Query: 177 FTWNFMMQGYVQNHSPNDAISLYKQMLVRGF-SPDNYTYPVVTKACSHLRALELGEAIHG 1
           ++WN +++ Y  +  P ++I ++ +ML R   SP+ +TYP V KA S LR LELG   HG
Sbjct: 96  YSWNTLIRAYASSTDPTESILVFLEMLYRCMESPNKFTYPFVIKAASELRVLELGRGFHG 155



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
 Frame = -3

Query: 363 FLLKNCSKREELDQ---IHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQI 193
           F++K  S+   L+     H  +I+  L  D ++ + ++ F+ GS    D+A  RRVF + 
Sbjct: 136 FVIKAASELRVLELGRGFHGMVIKASLGSDVYILNSLVHFY-GSCGDLDLA--RRVFVKT 192

Query: 192 PQPNAFTWNFMMQGYVQNHSPNDAISLYKQMLVRGFSPDNYTYPVVTKACSHLRALELG 16
           P+ +  +WN M+  +   + P +A+ L+K+M  +   P++ T   V  AC+    LE G
Sbjct: 193 PKKDVVSWNSMITAFAXGNCPEEALELFKEMEAKNVKPNDVTMVSVLSACAKKVDLEFG 251


>ref|XP_008356438.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Malus domestica]
          Length = 481

 Score =  107 bits (268), Expect = 6e-21
 Identities = 52/120 (43%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
 Frame = -3

Query: 357 LKNCSKREELDQIHSQMIRTGLIHDTHLASRIISFFVGSSTHFDVAYGRRVFDQIPQPNA 178
           + +C+  ++L Q+H+QM+RTGL+ D + AS++I+    SS    + Y R+VFDQIPQPN 
Sbjct: 37  IDHCTNIKQLKQVHAQMLRTGLLFDPYSASKLITVCALSSFS-SLDYARQVFDQIPQPNL 95

Query: 177 FTWNFMMQGYVQNHSPNDAISLYKQMLVRGF-SPDNYTYPVVTKACSHLRALELGEAIHG 1
           ++WN +++ Y  +  P ++I ++ +ML R   SP+ +TYP V KA S LR LELG   HG
Sbjct: 96  YSWNTLIRAYASSTDPTESILVFLEMLYRCMESPNKFTYPFVIKAASELRVLELGRGFHG 155