BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00024711
         (315 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi...   188   2e-45
ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [E...   187   3e-45
ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [N...   186   6e-45
gb|ACG35868.1| replication factor C subunit 3 [Zea mays]              186   6e-45
ref|XP_004954087.1| PREDICTED: replication factor C subunit 3 [S...   185   1e-44
ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 is...   184   3e-44
ref|XP_003570529.1| PREDICTED: replication factor C subunit 3 [B...   183   4e-44
ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [V...   183   5e-44
dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgar...   182   7e-44
gb|KMZ62297.1| Replication factor C subunit 3 [Zostera marina]        182   1e-43
ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [M...   182   1e-43
ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [S...   181   2e-43
ref|XP_012446954.1| PREDICTED: replication factor C subunit 5 [G...   180   3e-43
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   180   3e-43
gb|KDO80568.1| hypothetical protein CISIN_1g0178842mg, partial [...   179   6e-43
ref|XP_006647989.1| PREDICTED: replication factor C subunit 3-li...   179   6e-43
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li...   179   6e-43
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr...   179   6e-43
gb|EMT26703.1| Replication factor C subunit 5 [Aegilops tauschii]     179   6e-43
ref|XP_008466735.1| PREDICTED: replication factor C subunit 5 [C...   179   9e-43

>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays]
           gi|194696262|gb|ACF82215.1| unknown [Zea mays]
           gi|413939151|gb|AFW73702.1| replication factor C subunit
           3 [Zea mays]
          Length = 362

 Score =  188 bits (477), Expect = 2e-45
 Identities = 90/104 (86%), Positives = 99/104 (95%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMASQ ITEEAVYLCTGNPMPKDIEQI FWLLNEPF+ SF+YIS+
Sbjct: 230 SNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISD 289

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KM+KGLALVDI+REVTMF+F I+MPSD RV+LINDLADIEYRL
Sbjct: 290 MKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLINDLADIEYRL 333


>ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [Elaeis guineensis]
          Length = 356

 Score =  187 bits (474), Expect = 3e-45
 Identities = 91/104 (87%), Positives = 98/104 (94%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMASQ +TEEAVYLCTGNPMPKDIEQI +WLLNE + ASFRYIS+
Sbjct: 224 SNGDMRKALNILQSTHMASQHVTEEAVYLCTGNPMPKDIEQIAYWLLNESYTASFRYISD 283

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           IKMKKGLALVDIVREVTMF+F I+MPSD RV+LINDLADIEYRL
Sbjct: 284 IKMKKGLALVDIVREVTMFVFKIQMPSDVRVKLINDLADIEYRL 327


>ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [Nelumbo nucifera]
          Length = 358

 Score =  186 bits (472), Expect = 6e-45
 Identities = 94/104 (90%), Positives = 97/104 (93%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           S+GDMRKALNILQSTHMASQ ITEEAVYLCTGNPMPKDIEQI FWLLNE FA S+R ISE
Sbjct: 226 SSGDMRKALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNESFATSYRCISE 285

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KMKKGLALVDIVREVTMFIF IKMPSD RVQLINDLADIEYRL
Sbjct: 286 MKMKKGLALVDIVREVTMFIFKIKMPSDVRVQLINDLADIEYRL 329


>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  186 bits (472), Expect = 6e-45
 Identities = 89/104 (85%), Positives = 99/104 (95%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMASQ ITEEAVYLCTGNPMPKDIEQI FWLLNEPF+ SF+YIS+
Sbjct: 230 SNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISD 289

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KM+KGLALVDI+REVTMF+F I+MPSD RV+LIN+LADIEYRL
Sbjct: 290 MKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLINNLADIEYRL 333


>ref|XP_004954087.1| PREDICTED: replication factor C subunit 3 [Setaria italica]
           gi|944267497|gb|KQL31737.1| hypothetical protein
           SETIT_017595mg [Setaria italica]
          Length = 361

 Score =  185 bits (469), Expect = 1e-44
 Identities = 88/104 (84%), Positives = 99/104 (95%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMASQ ITEEAVYLCTGNPMPKDIE+I FWLLNEPF+ SF++IS+
Sbjct: 230 SNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEEIAFWLLNEPFSTSFKHISD 289

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KM+KGLALVDI+REVTMF+F I+MPSD RV+LINDLADIEYRL
Sbjct: 290 MKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLINDLADIEYRL 333


>ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 isoform X2 [Phoenix
           dactylifera]
          Length = 355

 Score =  184 bits (466), Expect = 3e-44
 Identities = 89/104 (85%), Positives = 98/104 (94%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMASQ +TEE+VYLCTGNPMPKDIEQI +WLLNE F ASFRYIS+
Sbjct: 223 SNGDMRKALNILQSTHMASQHVTEESVYLCTGNPMPKDIEQIAYWLLNESFTASFRYISD 282

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           IKM+KGLALVDIVREVTMF+F I+MPSD RV+LIN+LADIEYRL
Sbjct: 283 IKMRKGLALVDIVREVTMFVFKIQMPSDVRVKLINNLADIEYRL 326


>ref|XP_003570529.1| PREDICTED: replication factor C subunit 3 [Brachypodium distachyon]
           gi|944066072|gb|KQK01663.1| hypothetical protein
           BRADI_3g57410 [Brachypodium distachyon]
          Length = 358

 Score =  183 bits (465), Expect = 4e-44
 Identities = 87/104 (83%), Positives = 98/104 (94%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           S+GDMRKALNILQSTHMASQ ITEEAVYLCTGNPMPKDIEQI FWLLNEPF+ SF+YIS+
Sbjct: 226 SSGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISD 285

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KM+KGLAL+DI+REVTMF+F IKMP + RV+LINDLADIEYRL
Sbjct: 286 MKMRKGLALIDIIREVTMFVFKIKMPCNVRVKLINDLADIEYRL 329


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [Vitis vinifera]
           gi|302141794|emb|CBI18997.3| unnamed protein product
           [Vitis vinifera]
          Length = 360

 Score =  183 bits (464), Expect = 5e-44
 Identities = 90/104 (86%), Positives = 97/104 (93%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           S+GDMRKALNILQSTHMASQ ITEEAVYLCTGNP+PKDIEQI +WLLNE FAASF  ISE
Sbjct: 228 SSGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISE 287

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KM+KGLALVD+VREVTMF+F IKMPSD RVQLINDLADIEYRL
Sbjct: 288 VKMRKGLALVDVVREVTMFVFKIKMPSDVRVQLINDLADIEYRL 331


>dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326531584|dbj|BAJ97796.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 359

 Score =  182 bits (463), Expect = 7e-44
 Identities = 86/104 (82%), Positives = 98/104 (94%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRK+LNILQSTHMASQ ITEEAVYLCTGNPMPKDIEQI FWLLNEPF+ SF++I++
Sbjct: 227 SNGDMRKSLNILQSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIAD 286

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KM+KGLAL+DI+REVTMF+F IKMPS  RV+LINDLADIEYRL
Sbjct: 287 MKMRKGLALIDIIREVTMFVFKIKMPSSVRVKLINDLADIEYRL 330


>gb|KMZ62297.1| Replication factor C subunit 3 [Zostera marina]
          Length = 360

 Score =  182 bits (461), Expect = 1e-43
 Identities = 88/104 (84%), Positives = 96/104 (92%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMAS  +TE+AVYLCTGNP+PKDIEQI  WLLNE F A F+YISE
Sbjct: 228 SNGDMRKALNILQSTHMASPHVTEDAVYLCTGNPLPKDIEQISHWLLNESFTAGFKYISE 287

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           IKM+KGLALVDIVREVT+FIFNIKMP+D R+QLINDLADIEYRL
Sbjct: 288 IKMRKGLALVDIVREVTLFIFNIKMPADVRIQLINDLADIEYRL 331


>ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [Musa acuminata subsp.
           malaccensis]
          Length = 357

 Score =  182 bits (461), Expect = 1e-43
 Identities = 87/104 (83%), Positives = 97/104 (93%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           S+GDMRKALNILQSTHMAS  +T+EAVYLCTGNPMPKDIEQI +WLLNE F A+FRYIS+
Sbjct: 225 SSGDMRKALNILQSTHMASPHVTDEAVYLCTGNPMPKDIEQIAYWLLNESFTAAFRYISD 284

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KMKKGLAL+DIVREVTMF+F IKMPSD RV+LINDLADIEYRL
Sbjct: 285 VKMKKGLALIDIVREVTMFVFKIKMPSDIRVKLINDLADIEYRL 328


>ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [Sorghum bicolor]
           gi|241934472|gb|EES07617.1| hypothetical protein
           SORBIDRAFT_04g034710 [Sorghum bicolor]
          Length = 362

 Score =  181 bits (458), Expect = 2e-43
 Identities = 86/104 (82%), Positives = 98/104 (94%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMASQ ITEEAVYLCTGNPMP DIE+I FWLLNEPF+ SF++IS+
Sbjct: 230 SNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPNDIERIAFWLLNEPFSTSFKHISD 289

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KM+KGLALVDI+REVTMF+F I+MPSD RV+LIN+LADIEYRL
Sbjct: 290 MKMRKGLALVDIIREVTMFVFKIEMPSDVRVKLINNLADIEYRL 333


>ref|XP_012446954.1| PREDICTED: replication factor C subunit 5 [Gossypium raimondii]
           gi|763792295|gb|KJB59291.1| hypothetical protein
           B456_009G247600 [Gossypium raimondii]
          Length = 363

 Score =  180 bits (457), Expect = 3e-43
 Identities = 88/104 (84%), Positives = 95/104 (91%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMASQ ITEEAVYLCTGNP+PKDIEQI +WLLNE FA SF+ +SE
Sbjct: 231 SNGDMRKALNILQSTHMASQKITEEAVYLCTGNPLPKDIEQISYWLLNESFAESFKRVSE 290

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
            K +KGLAL+DIVREVTMF+F IKMPSD RVQLINDLADIEYRL
Sbjct: 291 TKTRKGLALIDIVREVTMFVFKIKMPSDVRVQLINDLADIEYRL 334


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540562|gb|EEF42129.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 360

 Score =  180 bits (457), Expect = 3e-43
 Identities = 89/104 (85%), Positives = 96/104 (92%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMASQ ITEEAV+LCTGNP+PKDI+QI +WLLNE FA SF+ ISE
Sbjct: 228 SNGDMRKALNILQSTHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISE 287

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           IK KKGLALVDIVREVTMF+F IKMPSD RVQLIND+ADIEYRL
Sbjct: 288 IKTKKGLALVDIVREVTMFVFKIKMPSDVRVQLINDMADIEYRL 331


>gb|KDO80568.1| hypothetical protein CISIN_1g0178842mg, partial [Citrus sinensis]
           gi|641861882|gb|KDO80569.1| hypothetical protein
           CISIN_1g0178842mg, partial [Citrus sinensis]
          Length = 147

 Score =  179 bits (455), Expect = 6e-43
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = +2

Query: 5   NGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISEI 184
           NGDMRKALNILQSTHMASQ ITEEAVYLCTGNP+PKDIEQI +WLLNE FA SF+ ISE+
Sbjct: 16  NGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEM 75

Query: 185 KMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           KM+KGLALVDIVREVTMF+F IKMPSD RV+L+NDLADIEYRL
Sbjct: 76  KMRKGLALVDIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRL 118


>ref|XP_006647989.1| PREDICTED: replication factor C subunit 3-like [Oryza brachyantha]
          Length = 362

 Score =  179 bits (455), Expect = 6e-43
 Identities = 86/104 (82%), Positives = 97/104 (93%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMAS+ ITEEAVYLCTGNPM KDIEQI FWLLNEPF+ SF+ IS+
Sbjct: 230 SNGDMRKALNILQSTHMASKQITEEAVYLCTGNPMQKDIEQIAFWLLNEPFSTSFKCISD 289

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           +KM+KGLALVDI+REVTMF+F I+MPSD R++LINDLADIEYRL
Sbjct: 290 MKMRKGLALVDIIREVTMFVFKIQMPSDVRIKLINDLADIEYRL 333


>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
          Length = 364

 Score =  179 bits (455), Expect = 6e-43
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = +2

Query: 5   NGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISEI 184
           NGDMRKALNILQSTHMASQ ITEEAVYLCTGNP+PKDIEQI +WLLNE FA SF+ ISE+
Sbjct: 233 NGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEM 292

Query: 185 KMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           KM+KGLALVDIVREVTMF+F IKMPSD RV+L+NDLADIEYRL
Sbjct: 293 KMRKGLALVDIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRL 335


>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
           gi|557536359|gb|ESR47477.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
          Length = 364

 Score =  179 bits (455), Expect = 6e-43
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = +2

Query: 5   NGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISEI 184
           NGDMRKALNILQSTHMASQ ITEEAVYLCTGNP+PKDIEQI +WLLNE FA SF+ ISE+
Sbjct: 233 NGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEM 292

Query: 185 KMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           KM+KGLALVDIVREVTMF+F IKMPSD RV+L+NDLADIEYRL
Sbjct: 293 KMRKGLALVDIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRL 335


>gb|EMT26703.1| Replication factor C subunit 5 [Aegilops tauschii]
          Length = 359

 Score =  179 bits (455), Expect = 6e-43
 Identities = 86/104 (82%), Positives = 95/104 (91%)
 Frame = +2

Query: 2   SNGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISE 181
           SNGDMRKALNILQSTHMAS  ITEEAVYLCTGNPMPKDIEQI  WLLNEPF+ SF+YIS+
Sbjct: 227 SNGDMRKALNILQSTHMASSQITEEAVYLCTGNPMPKDIEQIASWLLNEPFSTSFKYISD 286

Query: 182 IKMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
            KM+KGLAL+DI+REVTMF+F I MPS+ RV+LINDLADIEYRL
Sbjct: 287 TKMRKGLALIDIIREVTMFVFKINMPSNVRVKLINDLADIEYRL 330


>ref|XP_008466735.1| PREDICTED: replication factor C subunit 5 [Cucumis melo]
          Length = 363

 Score =  179 bits (453), Expect = 9e-43
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = +2

Query: 5   NGDMRKALNILQSTHMASQTITEEAVYLCTGNPMPKDIEQICFWLLNEPFAASFRYISEI 184
           +GDMRKALNILQSTHMASQ ITEEAVYLCTGNPMPKDIEQI FWLLNEPF+ SF+ ISEI
Sbjct: 232 SGDMRKALNILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEI 291

Query: 185 KMKKGLALVDIVREVTMFIFNIKMPSDARVQLINDLADIEYRL 313
           K +KGLALVDIVREVT+F+F IKMPS+ RVQLINDLADIEYR+
Sbjct: 292 KTRKGLALVDIVREVTLFVFKIKMPSNIRVQLINDLADIEYRM 334