BLASTX nr result

ID: Cinnamomum24_contig00024685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00024685
         (291 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008354807.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    70   8e-10
ref|XP_011461457.1| PREDICTED: transcription initiation factor T...    69   1e-09
ref|XP_008355075.1| PREDICTED: transcription initiation factor T...    69   1e-09
ref|XP_009354253.1| PREDICTED: transcription initiation factor T...    69   1e-09
ref|XP_009354246.1| PREDICTED: transcription initiation factor T...    69   1e-09
ref|XP_008233891.1| PREDICTED: transcription initiation factor T...    68   3e-09
ref|XP_007016971.1| TBP-associated factor 15B isoform 2 [Theobro...    68   3e-09
ref|XP_007016970.1| TBP-associated factor 15B isoform 1 [Theobro...    68   3e-09
ref|XP_008384744.1| PREDICTED: transcription initiation factor T...    67   7e-09
ref|XP_008384743.1| PREDICTED: transcription initiation factor T...    67   7e-09
ref|XP_006575424.1| PREDICTED: transcription initiation factor T...    66   1e-08
ref|XP_003518322.1| PREDICTED: transcription initiation factor T...    66   1e-08
ref|XP_011658817.1| PREDICTED: transcription initiation factor T...    65   2e-08
ref|XP_008457317.1| PREDICTED: transcription initiation factor T...    65   2e-08
ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu...    65   2e-08
gb|KNA09554.1| hypothetical protein SOVF_152460 [Spinacia oleracea]    65   3e-08
gb|KHN40104.1| HIV Tat-specific factor 1 like [Glycine soja]           65   3e-08
ref|XP_010323123.1| PREDICTED: transcription initiation factor T...    65   3e-08
ref|XP_009790083.1| PREDICTED: transcription initiation factor T...    65   3e-08
ref|XP_009631567.1| PREDICTED: transcription initiation factor T...    65   3e-08

>ref|XP_008354807.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
           TFIID subunit 15b-like [Malus domestica]
          Length = 473

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGNLNFARR ECNKCGTPSPSG
Sbjct: 114 WXCPNPGCGNLNFARRVECNKCGTPSPSG 142


>ref|XP_011461457.1| PREDICTED: transcription initiation factor TFIID subunit 15b
           [Fragaria vesca subsp. vesca]
          Length = 455

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGN+NFARRTECNKCGTPSP+G
Sbjct: 103 WPCPNPGCGNMNFARRTECNKCGTPSPAG 131


>ref|XP_008355075.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           [Malus domestica]
          Length = 470

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGNLNFARR ECNKCGTPSPSG
Sbjct: 114 WMCPNPGCGNLNFARRVECNKCGTPSPSG 142


>ref|XP_009354253.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X2 [Pyrus x bretschneideri]
          Length = 468

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGNLNFARR ECNKCGTPSPSG
Sbjct: 106 WLCPNPGCGNLNFARRVECNKCGTPSPSG 134


>ref|XP_009354246.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X1 [Pyrus x bretschneideri]
          Length = 469

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGNLNFARR ECNKCGTPSPSG
Sbjct: 106 WLCPNPGCGNLNFARRVECNKCGTPSPSG 134


>ref|XP_008233891.1| PREDICTED: transcription initiation factor TFIID subunit 15b
           [Prunus mume]
          Length = 474

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGNLNFARR ECNKCGTPSP+G
Sbjct: 118 WLCPNPGCGNLNFARRVECNKCGTPSPAG 146


>ref|XP_007016971.1| TBP-associated factor 15B isoform 2 [Theobroma cacao]
           gi|508787334|gb|EOY34590.1| TBP-associated factor 15B
           isoform 2 [Theobroma cacao]
          Length = 369

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           WHCPNP CGNLNFARR ECNKCG PSP+G
Sbjct: 106 WHCPNPSCGNLNFARRVECNKCGAPSPAG 134


>ref|XP_007016970.1| TBP-associated factor 15B isoform 1 [Theobroma cacao]
           gi|508787333|gb|EOY34589.1| TBP-associated factor 15B
           isoform 1 [Theobroma cacao]
          Length = 468

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           WHCPNP CGNLNFARR ECNKCG PSP+G
Sbjct: 106 WHCPNPSCGNLNFARRVECNKCGAPSPAG 134


>ref|XP_008384744.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X2 [Malus domestica]
          Length = 459

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGN NFARR ECNKCGTPSPSG
Sbjct: 108 WLCPNPGCGNSNFARRVECNKCGTPSPSG 136


>ref|XP_008384743.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X1 [Malus domestica]
          Length = 470

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGN NFARR ECNKCGTPSPSG
Sbjct: 108 WLCPNPGCGNSNFARRVECNKCGTPSPSG 136


>ref|XP_006575424.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X2 [Glycine max]
          Length = 390

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNP CGNLNFARR ECNKCG PSPSG
Sbjct: 53  WRCPNPSCGNLNFARRAECNKCGAPSPSG 81


>ref|XP_003518322.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X1 [Glycine max] gi|734432060|gb|KHN46123.1| HIV
           Tat-specific factor 1 like [Glycine soja]
           gi|947124536|gb|KRH72742.1| hypothetical protein
           GLYMA_02G230600 [Glycine max]
          Length = 404

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNP CGNLNFARR ECNKCG PSPSG
Sbjct: 53  WRCPNPSCGNLNFARRAECNKCGAPSPSG 81


>ref|XP_011658817.1| PREDICTED: transcription initiation factor TFIID subunit 15b
           [Cucumis sativus] gi|700210756|gb|KGN65852.1|
           hypothetical protein Csa_1G533590 [Cucumis sativus]
          Length = 491

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGNLNFARR ECNKCG PSP G
Sbjct: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGG 149


>ref|XP_008457317.1| PREDICTED: transcription initiation factor TFIID subunit 15b
           [Cucumis melo]
          Length = 490

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGNLNFARR ECNKCG PSP G
Sbjct: 122 WVCPNPGCGNLNFARRVECNKCGAPSPGG 150


>ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
           gi|223539602|gb|EEF41188.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 437

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNP CGNLNFARR ECNKCGTPSP+G
Sbjct: 100 WLCPNPSCGNLNFARRVECNKCGTPSPAG 128


>gb|KNA09554.1| hypothetical protein SOVF_152460 [Spinacia oleracea]
          Length = 450

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNPGCGNLNFARRT CNKCG P+P+G
Sbjct: 101 WPCPNPGCGNLNFARRTSCNKCGEPAPAG 129


>gb|KHN40104.1| HIV Tat-specific factor 1 like [Glycine soja]
          Length = 384

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNP CGNLNFARR ECNKCG PSP+G
Sbjct: 50  WRCPNPSCGNLNFARRAECNKCGAPSPAG 78


>ref|XP_010323123.1| PREDICTED: transcription initiation factor TFIID subunit 15b
           [Solanum lycopersicum]
          Length = 482

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNP CGNLNFARR ECNKCG PSP+G
Sbjct: 141 WRCPNPSCGNLNFARRVECNKCGAPSPAG 169


>ref|XP_009790083.1| PREDICTED: transcription initiation factor TFIID subunit 15b
           [Nicotiana sylvestris]
          Length = 461

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNP CGNLNFARR ECNKCG PSP+G
Sbjct: 123 WRCPNPSCGNLNFARRVECNKCGAPSPAG 151


>ref|XP_009631567.1| PREDICTED: transcription initiation factor TFIID subunit 15b
           [Nicotiana tomentosiformis]
          Length = 445

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +3

Query: 60  WHCPNPGCGNLNFARRTECNKCGTPSPSG 146
           W CPNP CGNLNFARR ECNKCG PSP+G
Sbjct: 107 WRCPNPSCGNLNFARRVECNKCGAPSPAG 135


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