BLASTX nr result

ID: Cinnamomum24_contig00024663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00024663
         (454 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...    90   4e-30
emb|CBI23503.3| unnamed protein product [Vitis vinifera]              110   5e-22
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...    99   9e-19
emb|CAA34729.1| unnamed protein product (mitochondrion) [Beta vu...    99   9e-19
ref|XP_007013544.1| Uncharacterized protein TCM_038148 [Theobrom...    97   5e-18
gb|AHJ81036.1| orf105 (mitochondrion) [Panax ginseng]                  79   1e-12
ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm...    69   4e-12
gb|KJB09778.1| hypothetical protein B456_001G164600 [Gossypium r...    77   5e-12
ref|YP_588306.1| hypothetical protein ZeamMp044 (mitochondrion) ...    73   7e-11
ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabac...    70   5e-10
gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativ...    57   7e-06

>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score = 90.1 bits (222), Expect(2) = 4e-30
 Identities = 44/47 (93%), Positives = 44/47 (93%)
 Frame = -1

Query: 301 QQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQVESGVTGTAV 161
           QQVRHLLQKRESTSDNH SARQRVEWPRADLFGYIIQVES VTG AV
Sbjct: 116 QQVRHLLQKRESTSDNHVSARQRVEWPRADLFGYIIQVESRVTGKAV 162



 Score = 68.2 bits (165), Expect(2) = 4e-30
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = -3

Query: 452 PSPRSARWPIGIAAFGLCLPFLIKNSGSAR*SAGNNRKE 336
           PSPRSA  PIGIAAFGLCLPF+IKNSGSAR SAGNNRKE
Sbjct: 62  PSPRSAL-PIGIAAFGLCLPFIIKNSGSARESAGNNRKE 99


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  110 bits (274), Expect = 5e-22
 Identities = 54/63 (85%), Positives = 55/63 (87%), Gaps = 4/63 (6%)
 Frame = -2

Query: 411 LRALPALSN*KFRLGPVKRWQQQKGRGPCSCCARPL----SSRFGIYYKRENPLQITTPL 244
           LRALPAL N +FRLGP KRWQQQKGRGPCSCCARPL     SRFGIYYKRENPLQITTPL
Sbjct: 182 LRALPALYNKEFRLGPGKRWQQQKGRGPCSCCARPLLSQWGSRFGIYYKRENPLQITTPL 241

Query: 243 LGS 235
           LGS
Sbjct: 242 LGS 244


>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
           gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
           subunit 2 (mitochondrion) [Beta vulgaris subsp.
           vulgaris]
          Length = 515

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 72/153 (47%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
 Frame = -3

Query: 452 PSPRSARWPIGIAAFGLCLPFLIKNSGSAR*SAGNNRKE----XXXXXXXXXXXXXXXXS 285
           PSPRSARWPIGIAAFGLCL FLIKNSGSAR SAGNNRKE                    +
Sbjct: 56  PSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSAT 115

Query: 284 TTKERIHFR*PRL-C*AACGMAESRPFWIYNPSREWSYGNSRLMENNXXXXXXXXXXXXX 108
           TTKERIHF+       AACGMA S  F           G + LMENN             
Sbjct: 116 TTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRALFSLR 175

Query: 107 FLVPFRVNSPAAN*QLVGPYLFHLSSPEENPPP 9
            L   RVNS A      GP +   SSP + P P
Sbjct: 176 ILRSLRVNSLARIQNFWGPSI-PSSSPAKTPLP 207


>emb|CAA34729.1| unnamed protein product (mitochondrion) [Beta vulgaris subsp.
           vulgaris]
          Length = 464

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 72/153 (47%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
 Frame = -3

Query: 452 PSPRSARWPIGIAAFGLCLPFLIKNSGSAR*SAGNNRKE----XXXXXXXXXXXXXXXXS 285
           PSPRSARWPIGIAAFGLCL FLIKNSGSAR SAGNNRKE                    +
Sbjct: 5   PSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSAT 64

Query: 284 TTKERIHFR*PRL-C*AACGMAESRPFWIYNPSREWSYGNSRLMENNXXXXXXXXXXXXX 108
           TTKERIHF+       AACGMA S  F           G + LMENN             
Sbjct: 65  TTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRALFSLR 124

Query: 107 FLVPFRVNSPAAN*QLVGPYLFHLSSPEENPPP 9
            L   RVNS A      GP +   SSP + P P
Sbjct: 125 ILRSLRVNSLARIQNFWGPSI-PSSSPAKTPLP 156


>ref|XP_007013544.1| Uncharacterized protein TCM_038148 [Theobroma cacao]
           gi|508783907|gb|EOY31163.1| Uncharacterized protein
           TCM_038148 [Theobroma cacao]
          Length = 538

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 49/73 (67%), Positives = 55/73 (75%)
 Frame = -1

Query: 379 IPARPGKALATTERKGSM*LLRPSTEQQVRHLLQKRESTSDNHASARQRVEWPRADLFGY 200
           + + P + L   E   +      S  +QVRHLL+KRESTSDNHASARQRVEWPRADLFGY
Sbjct: 466 VSSEPEELLVWVETTLAQDFYHNSEREQVRHLLEKRESTSDNHASARQRVEWPRADLFGY 525

Query: 199 IIQVESGVTGTAV 161
           IIQVESGVTGTAV
Sbjct: 526 IIQVESGVTGTAV 538


>gb|AHJ81036.1| orf105 (mitochondrion) [Panax ginseng]
          Length = 108

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = +3

Query: 327 MDPFLSVVASALPGRAGIFN*KGQAKPEGCYPNRPAGGTRR 449
           MDPFLSVVASA PGRAGI   KGQAKPEGCYPNRPAGGTRR
Sbjct: 1   MDPFLSVVASAFPGRAGILYYKGQAKPEGCYPNRPAGGTRR 41


>ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis]
           gi|223525904|gb|EEF28320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 68.6 bits (166), Expect(2) = 4e-12
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -2

Query: 420 DSSLRALPALSN*KFRLGPVKRWQQQKGRGPCSCCARPLSSRFG 289
           DSSL+ALPALSN  FRL P +RWQQ KG+GPCSC  RPL S++G
Sbjct: 34  DSSLQALPALSNKNFRLDPRERWQQHKGKGPCSCYVRPLLSKWG 77



 Score = 29.3 bits (64), Expect(2) = 4e-12
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -3

Query: 452 PSPRSARWPIG 420
           PSPRSARWPIG
Sbjct: 23  PSPRSARWPIG 33


>gb|KJB09778.1| hypothetical protein B456_001G164600 [Gossypium raimondii]
          Length = 494

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = -3

Query: 449 SPRSARWPIGIAAFGLCLPFLIKNSGSAR*SAGNNRKE 336
           SPRSARWPIGIAAFGLCLPF+IKNSGSAR SAGNNRKE
Sbjct: 24  SPRSARWPIGIAAFGLCLPFIIKNSGSARESAGNNRKE 61


>ref|YP_588306.1| hypothetical protein ZeamMp044 (mitochondrion) [Zea mays subsp.
           mays] gi|40795129|gb|AAR91173.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|102579662|gb|ABF70942.1|
           hypothetical protein (mitochondrion) [Zea mays subsp.
           mays]
          Length = 101

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -2

Query: 390 SN*KFRLGPVKRWQQQKGRGPCSCCARPLSSRFGIYY 280
           SN +FRLGP KRWQQ K RGPCSCCARPLSSRFGIYY
Sbjct: 57  SNKEFRLGPGKRWQQHKERGPCSCCARPLSSRFGIYY 93


>ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabacum]
           gi|56806589|dbj|BAD83490.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 105

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 36/42 (85%), Positives = 36/42 (85%)
 Frame = +3

Query: 327 MDPFLSVVASALPGRAGIFN*KGQAKPEGCYPNRPAGGTRRG 452
           MDPFLSVVASA PGRAGIF  KGQAKPEG YPNR  GGTRRG
Sbjct: 1   MDPFLSVVASAFPGRAGIFYYKGQAKPEGSYPNR-KGGTRRG 41


>gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
           gi|374277705|gb|AEZ03810.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
          Length = 164

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 25/30 (83%), Positives = 25/30 (83%)
 Frame = +2

Query: 305 SGRAQQLHGPLPFCCCQRFTGPSRNF*LER 394
           SGRAQQLHGPL  CCCQRF GPSRN  LER
Sbjct: 7   SGRAQQLHGPLSLCCCQRFPGPSRNSLLER 36


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