BLASTX nr result
ID: Cinnamomum24_contig00024548
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00024548
(520 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010257842.1| PREDICTED: small subunit processome componen... 132 1e-28
ref|XP_010650328.1| PREDICTED: small subunit processome componen... 122 1e-25
ref|XP_010650327.1| PREDICTED: small subunit processome componen... 122 1e-25
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 122 1e-25
ref|XP_010938573.1| PREDICTED: small subunit processome componen... 113 5e-23
ref|XP_008795691.1| PREDICTED: LOW QUALITY PROTEIN: U3 small nuc... 110 4e-22
ref|XP_012071266.1| PREDICTED: small subunit processome componen... 109 9e-22
gb|KDP39337.1| hypothetical protein JCGZ_01094 [Jatropha curcas] 109 9e-22
ref|XP_007216149.1| hypothetical protein PRUPE_ppa015122mg [Prun... 107 3e-21
ref|XP_008228625.1| PREDICTED: small subunit processome componen... 107 5e-21
ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prun... 105 1e-20
ref|XP_006360968.1| PREDICTED: small subunit processome componen... 103 4e-20
ref|XP_011003609.1| PREDICTED: U3 small nucleolar RNA-associated... 103 5e-20
ref|XP_011045607.1| PREDICTED: U3 small nucleolar RNA-associated... 103 5e-20
ref|XP_010326859.1| PREDICTED: small subunit processome componen... 102 9e-20
ref|XP_007034248.1| ARM repeat superfamily protein, putative [Th... 102 9e-20
ref|XP_009399347.1| PREDICTED: small subunit processome componen... 102 1e-19
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 102 1e-19
ref|XP_012455020.1| PREDICTED: small subunit processome componen... 101 2e-19
ref|XP_012455019.1| PREDICTED: small subunit processome componen... 101 2e-19
>ref|XP_010257842.1| PREDICTED: small subunit processome component 20 homolog [Nelumbo
nucifera]
Length = 2710
Score = 132 bits (331), Expect = 1e-28
Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Frame = -3
Query: 515 FERLSELNQEVLNFVSDLILDEISDC-IRDDCFXXXXXXXXXLYPVQSKKRGRSCGCSRI 339
F+RL E Q+ LN + D +L EISDC I++ + VQ G+ +
Sbjct: 292 FQRLCEELQQELNLIFDCLLVEISDCVIQEQLLHLTRLLSILISTVQFTTGGKVSDYQPM 351
Query: 338 LQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKWDP 177
L LV L++ I PS E+ +++VNK LQ +LCLLD D SAI+ IS +W P
Sbjct: 352 LNLVGLLMRTYIKPSGNGMVEDHSYDLVNKILQFMLCLLDGLHNSNDASAIASISSQWAP 411
Query: 176 VFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
+F+LRN LL FI+ LL KDPS++Y FR HI+ A++D++E PE VM L+L+FFER+Q
Sbjct: 412 IFELRNPCLLNFIKELLGKDPSLAYVFRSHILSALSDMVEASPEEVMYLILIFFERVQ 469
>ref|XP_010650328.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Vitis vinifera]
Length = 2710
Score = 122 bits (306), Expect = 1e-25
Identities = 76/179 (42%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Frame = -3
Query: 515 FERL-SELNQEVLNFVSDLILDEISDCIRDDCFXXXXXXXXXLYPVQSKKRG-RSCGCSR 342
F+RL EL + LN + D ++I++C+ + C L G +
Sbjct: 292 FQRLCEELESKELNLLWDCFYEDITECVTNGCSMHLTRLLFLLVSTLQIDNGLKISDYQP 351
Query: 341 ILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKWD 180
+L+LV LV+ IIPS + AE+ E+V+K LQL+LC+LD D S IS +S +W
Sbjct: 352 MLELVRLLVRTFIIPSNIVVAEDHLSEIVDKVLQLMLCILDGLHISNDMSTISSLSSQWA 411
Query: 179 PVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
P F+LRN SLL FI+ LL KDP + Y FR +I+ AMN LIE PE V+ LMLMF ER+Q
Sbjct: 412 PAFELRNPSLLNFIKSLLSKDPYMVYTFRINILSAMNSLIETSPEEVIFLMLMFNERLQ 470
>ref|XP_010650327.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Vitis vinifera]
Length = 2710
Score = 122 bits (306), Expect = 1e-25
Identities = 76/179 (42%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Frame = -3
Query: 515 FERL-SELNQEVLNFVSDLILDEISDCIRDDCFXXXXXXXXXLYPVQSKKRG-RSCGCSR 342
F+RL EL + LN + D ++I++C+ + C L G +
Sbjct: 292 FQRLCEELESKELNLLWDCFYEDITECVTNGCSMHLTRLLFLLVSTLQIDNGLKISDYQP 351
Query: 341 ILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKWD 180
+L+LV LV+ IIPS + AE+ E+V+K LQL+LC+LD D S IS +S +W
Sbjct: 352 MLELVRLLVRTFIIPSNIVVAEDHLSEIVDKVLQLMLCILDGLHISNDMSTISSLSSQWA 411
Query: 179 PVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
P F+LRN SLL FI+ LL KDP + Y FR +I+ AMN LIE PE V+ LMLMF ER+Q
Sbjct: 412 PAFELRNPSLLNFIKSLLSKDPYMVYTFRINILSAMNSLIETSPEEVIFLMLMFNERLQ 470
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 122 bits (306), Expect = 1e-25
Identities = 76/179 (42%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Frame = -3
Query: 515 FERL-SELNQEVLNFVSDLILDEISDCIRDDCFXXXXXXXXXLYPVQSKKRG-RSCGCSR 342
F+RL EL + LN + D ++I++C+ + C L G +
Sbjct: 292 FQRLCEELESKELNLLWDCFYEDITECVTNGCSMHLTRLLFLLVSTLQIDNGLKISDYQP 351
Query: 341 ILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKWD 180
+L+LV LV+ IIPS + AE+ E+V+K LQL+LC+LD D S IS +S +W
Sbjct: 352 MLELVRLLVRTFIIPSNIVVAEDHLSEIVDKVLQLMLCILDGLHISNDMSTISSLSSQWA 411
Query: 179 PVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
P F+LRN SLL FI+ LL KDP + Y FR +I+ AMN LIE PE V+ LMLMF ER+Q
Sbjct: 412 PAFELRNPSLLNFIKSLLSKDPYMVYTFRINILSAMNSLIETSPEEVIFLMLMFNERLQ 470
>ref|XP_010938573.1| PREDICTED: small subunit processome component 20 homolog [Elaeis
guineensis]
Length = 2721
Score = 113 bits (283), Expect = 5e-23
Identities = 69/169 (40%), Positives = 98/169 (57%), Gaps = 4/169 (2%)
Frame = -3
Query: 503 SELNQEVLNFVSDLILDEISDCIRDDCFXXXXXXXXXL-YPVQSKKRGRSCGCSRILQLV 327
SEL+ + L V D + EIS CI D CF L + + + R ++ +L+
Sbjct: 296 SELDHKELKVVYDCLFREISGCISDGCFVHLNHILGLLTFTIHNSNNSRVFDNQKMFELI 355
Query: 326 EQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLDDP---SAISEISVKWDPVFDLRNS 156
+ L+Q I P+ K+E+ EV ++ LQL++CLLD P +S IS+ + P F LR+S
Sbjct: 356 KLLIQAYITPADCSKSEDISSEVHDRILQLMICLLDVPLTSDELSSISLLYAPAFKLRSS 415
Query: 155 SLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFER 9
SL FI+G+L KDP I++ FR HII AM+D IED V+ LML F ER
Sbjct: 416 SLFDFIKGVLLKDPHIAHVFRSHIISAMDDSIEDSSNEVLFLMLTFLER 464
>ref|XP_008795691.1| PREDICTED: LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated
protein 20-like [Phoenix dactylifera]
Length = 2722
Score = 110 bits (275), Expect = 4e-22
Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 4/169 (2%)
Frame = -3
Query: 503 SELNQEVLNFVSDLILDEISDCIRDDCFXXXXXXXXXL-YPVQSKKRGRSCGCSRILQLV 327
+EL+ + L V D + EIS CI D C L + + + + I +L+
Sbjct: 296 NELDHKELKVVYDCLFREISGCISDGCLVHLNHMLGLLTFTIHNSNKSSVFDNKTIFELI 355
Query: 326 EQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLDDP---SAISEISVKWDPVFDLRNS 156
+ L+Q I P+ + +E+ EV ++ LQL++CLLD P S +S IS+ + P F R+S
Sbjct: 356 KLLIQAYIAPADCLMSEDMSSEVHDRILQLMICLLDLPLTSSELSSISLLYAPAFKFRSS 415
Query: 155 SLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFER 9
SL FI+G+L KDP I+ FR HII AM+DLIE P V+ LML FFER
Sbjct: 416 SLFDFIKGVLLKDPHIANVFRSHIISAMDDLIEASPNEVLLLMLTFFER 464
>ref|XP_012071266.1| PREDICTED: small subunit processome component 20 homolog [Jatropha
curcas]
Length = 2657
Score = 109 bits (272), Expect = 9e-22
Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 6/120 (5%)
Frame = -3
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKW 183
++++ V+ +VQ I+PS I E +VV+K LQL+LC+LD D S IS S++W
Sbjct: 290 QMIERVKSIVQKFIVPS-SIVVEEGNSKVVDKVLQLMLCILDGLKSLNDMSTISACSLQW 348
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
PVF LRNSS LTFI+ LLEKDP + YAFR +I+ A+NDLIE E V+ ++L F ER+Q
Sbjct: 349 TPVFQLRNSSCLTFIKELLEKDPCVIYAFRVNILSALNDLIETSQEDVLCMLLSFCERLQ 408
>gb|KDP39337.1| hypothetical protein JCGZ_01094 [Jatropha curcas]
Length = 2723
Score = 109 bits (272), Expect = 9e-22
Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 6/120 (5%)
Frame = -3
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKW 183
++++ V+ +VQ I+PS I E +VV+K LQL+LC+LD D S IS S++W
Sbjct: 342 QMIERVKSIVQKFIVPS-SIVVEEGNSKVVDKVLQLMLCILDGLKSLNDMSTISACSLQW 400
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
PVF LRNSS LTFI+ LLEKDP + YAFR +I+ A+NDLIE E V+ ++L F ER+Q
Sbjct: 401 TPVFQLRNSSCLTFIKELLEKDPCVIYAFRVNILSALNDLIETSQEDVLCMLLSFCERLQ 460
>ref|XP_007216149.1| hypothetical protein PRUPE_ppa015122mg [Prunus persica]
gi|462412299|gb|EMJ17348.1| hypothetical protein
PRUPE_ppa015122mg [Prunus persica]
Length = 2641
Score = 107 bits (267), Expect = 3e-21
Identities = 72/180 (40%), Positives = 103/180 (57%), Gaps = 8/180 (4%)
Frame = -3
Query: 518 AFERL-SELNQEVLNFVSDLILDEISDC-IRDDCFXXXXXXXXXLYPVQSKKRGRSCGCS 345
A +RL +L+ + LN + + + EI+DC I + VQ K R
Sbjct: 283 ALQRLCDDLDSKELNIMFNCLYQEITDCMINGGVERLSCLLSLLVSTVQVKNGQRVSDYQ 342
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLL------DDPSAISEISVKW 183
++L++V LV+ I+PS AE +VV+K LQL+LC+L +D S IS S++W
Sbjct: 343 QMLEIVGLLVRTFIMPSGITMAEEHSSDVVDKVLQLMLCILSGLHSYNDMSTISSCSLQW 402
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
PVFDL+NSSLL FI LL+KD I F +I+RAMNDL+E E V+ L+L F E++Q
Sbjct: 403 APVFDLKNSSLLGFIRQLLQKDVCILDIFAVNILRAMNDLLETSQEDVIYLLLTFNEKLQ 462
>ref|XP_008228625.1| PREDICTED: small subunit processome component 20 homolog [Prunus
mume]
Length = 2725
Score = 107 bits (266), Expect = 5e-21
Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Frame = -3
Query: 518 AFERL-SELNQEVLNFVSDLILDEISDC-IRDDCFXXXXXXXXXLYPVQSKKRGRSCGCS 345
A +RL +L+ + LN + +++ EI+DC I + +Q K R
Sbjct: 291 ALQRLCDDLDSKELNLMFNILYQEITDCVINGGVERLSRLLLLLVSTIQVKNGQRVSDYQ 350
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLL------DDPSAISEISVKW 183
++L++V LV+ IIPS A+ +VV+K LQL+L +L +D S IS S++W
Sbjct: 351 QMLEIVGLLVRTFIIPSGITMAKEHSSDVVDKVLQLMLSILSGLHSYNDMSTISSCSLQW 410
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
PVFDL+NSSLL FI LL+KD + FR +I+RAMNDLIE E V+ L+L F E++Q
Sbjct: 411 APVFDLKNSSLLGFIRQLLQKDVCVLDIFRVNILRAMNDLIETSQEDVIYLLLTFSEKLQ 470
>ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
gi|462411042|gb|EMJ16091.1| hypothetical protein
PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 105 bits (262), Expect = 1e-20
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Frame = -3
Query: 518 AFERL-SELNQEVLNFVSDLILDEISDC-IRDDCFXXXXXXXXXLYPVQSKKRGRSCGCS 345
A +RL +L+ + LN + +++ EI+DC I + +Q K R
Sbjct: 291 ALQRLCDDLDSKELNLMFNILYQEITDCVINGGVERLSRLLLLLVSTIQVKNGQRVSDYQ 350
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLL------DDPSAISEISVKW 183
++L++V LV+ I+PS A+ +VV+K LQL+L +L +D S IS S++W
Sbjct: 351 QMLEIVGLLVRTFIMPSGITMAKEHSSDVVDKVLQLMLSILSGLHSYNDMSTISSCSLQW 410
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
PVFDL+NSSLL FI LL+KD + FR +I+RAMNDLIE E V+ L+L F E++Q
Sbjct: 411 APVFDLKNSSLLGFIRQLLQKDVCVLDIFRVNILRAMNDLIETSQEDVIYLLLTFNEKLQ 470
>ref|XP_006360968.1| PREDICTED: small subunit processome component 20 homolog [Solanum
tuberosum]
Length = 1461
Score = 103 bits (258), Expect = 4e-20
Identities = 54/118 (45%), Positives = 81/118 (68%), Gaps = 6/118 (5%)
Frame = -3
Query: 341 ILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKWD 180
+LQL++ LVQ I+P +KA + +V+K +Q +LC+LD + S +S +S++W
Sbjct: 352 VLQLIQLLVQTYILPYPTVKAIDQTSNIVDKVMQSMLCILDGLYRANNISTLSSVSMQWA 411
Query: 179 PVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERM 6
PVFDLRN SLL+F+E LL KDP I + FR II A+ND+IE E V++L+ +FF+R+
Sbjct: 412 PVFDLRNKSLLSFVEDLLLKDPCIVHFFRASIISALNDMIEISEEEVIHLLQIFFKRL 469
>ref|XP_011003609.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like
[Populus euphratica]
Length = 2847
Score = 103 bits (257), Expect = 5e-20
Identities = 54/119 (45%), Positives = 78/119 (65%), Gaps = 6/119 (5%)
Frame = -3
Query: 341 ILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKWD 180
+L+ V+ L + IIP V +K EN EV++K LQL+LC LD D + IS ++W
Sbjct: 356 MLECVKNLFERFIIPYVALKGENHFSEVIDKVLQLLLCTLDGLKSCNDMATISHCLLQWA 415
Query: 179 PVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
P F LRNSS+LTF+ L+++DP I Y FR +I+ AMNDLIE + ++ L+L F E++Q
Sbjct: 416 PAFKLRNSSILTFLSELMKRDPCILYEFRANILSAMNDLIETSQKEIVFLLLTFCEKLQ 474
>ref|XP_011045607.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like
[Populus euphratica]
Length = 2847
Score = 103 bits (257), Expect = 5e-20
Identities = 54/119 (45%), Positives = 78/119 (65%), Gaps = 6/119 (5%)
Frame = -3
Query: 341 ILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKWD 180
+L+ V+ L + IIP V +K EN EV++K LQL+LC LD D + IS ++W
Sbjct: 356 MLECVKNLFERFIIPYVALKGENHFSEVIDKVLQLLLCTLDGLKSCNDMATISHCLLQWA 415
Query: 179 PVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
P F LRNSS+LTF+ L+++DP I Y FR +I+ AMNDLIE + ++ L+L F E++Q
Sbjct: 416 PAFKLRNSSILTFLSELMKRDPCILYEFRANILSAMNDLIETSQKEIVFLLLTFCEKLQ 474
>ref|XP_010326859.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2680
Score = 102 bits (255), Expect = 9e-20
Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 8/179 (4%)
Frame = -3
Query: 518 AFERL-SELNQEVLNFVSDLILDEISDCI-RDDCFXXXXXXXXXLYPVQSKKRGRSCGCS 345
A +RL EL L + + DEI++C+ + + +Q+ +
Sbjct: 291 ALQRLCEELEATELELMWVCLYDEITECVTQGHLLHLGRLLSLLVSTLQASYIQKISDYQ 350
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKW 183
+LQL++ LVQ I+P +K + VV+K +Q +LC+ D + S +S +S++W
Sbjct: 351 GLLQLIQLLVQTYILPYPTVKEIDQASNVVDKVMQSMLCIFDGLYRANNISTLSSVSMQW 410
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERM 6
PVFDLRN SLL+F+E LL KDP I + FR II A+ND+IE E V++L+ +FF+R+
Sbjct: 411 APVFDLRNKSLLSFVEDLLLKDPCIVHFFRASIISALNDMIEISEEEVIHLLQIFFKRL 469
>ref|XP_007034248.1| ARM repeat superfamily protein, putative [Theobroma cacao]
gi|508713277|gb|EOY05174.1| ARM repeat superfamily
protein, putative [Theobroma cacao]
Length = 2725
Score = 102 bits (255), Expect = 9e-20
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 8/180 (4%)
Frame = -3
Query: 518 AFERLSE-LNQEVLNFVSDLILDEISDCIRDDCFXXXXXXXXXLYPVQSKKRGRSCG-CS 345
AF++LSE L + L + + + EI+D + F L GR
Sbjct: 291 AFQKLSEELEPKELTLMWECLYQEINDSETNGSFLHLSRLLSLLTSAVQVNNGRGVSNYQ 350
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKW 183
++L++V LV+ ++ PS K EVV+K L L+L +LD + S+IS ++W
Sbjct: 351 QMLKVVGSLVRKIVRPSN--KGNGSLPEVVDKVLSLMLHILDGLYGSNNLSSISGCLLQW 408
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
PVF+L NSSLLTF+ LL KDPS+ Y FR HI+ AMNDL+E E V+ L+L FFER+Q
Sbjct: 409 TPVFELGNSSLLTFLRELLLKDPSVIYIFRDHILSAMNDLVESSSEEVICLLLSFFERLQ 468
>ref|XP_009399347.1| PREDICTED: small subunit processome component 20 homolog [Musa
acuminata subsp. malaccensis]
Length = 2711
Score = 102 bits (254), Expect = 1e-19
Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 4/171 (2%)
Frame = -3
Query: 503 SELNQEVLNFVSDLILDEISDCIRD-DCFXXXXXXXXXLYPVQSKKRGRSCGCSRILQLV 327
+E+N E L + ++ EI +CI D D + V + + IL LV
Sbjct: 295 NEINPEELKVIFHSLIKEILNCISDGDLEHLNHLLSLLTFAVCNIDGSKVYDRQTILDLV 354
Query: 326 EQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLDDPSA---ISEISVKWDPVFDLRNS 156
L+Q+ ++PS+ ++ E+ +V+++ L+L+LCLLD P +S I + + PVF L++S
Sbjct: 355 SSLIQSFVVPSISVEMEDLPSKVLSRVLELMLCLLDVPLISVDMSSILLLYAPVFKLKSS 414
Query: 155 SLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
LL F+ G + KDP I + FR HI+ M DL+E PE + LM+ FFE+ +
Sbjct: 415 RLLEFLRGFILKDPEIVHVFRSHILSVMGDLVEVSPEEALFLMMAFFEKQR 465
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 102 bits (253), Expect = 1e-19
Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
Frame = -3
Query: 341 ILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKWD 180
+L+ V+ L + IIP V +K EN EV++K LQL+LC LD D + IS ++W
Sbjct: 242 MLECVKNLFERFIIPYVALKGENHFSEVIDKVLQLLLCTLDGLKSSNDMATISHCLLQWA 301
Query: 179 PVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
P F LRNSS+LTF L+++DP I Y FR +I+ AMNDLIE + ++ L+L F E++Q
Sbjct: 302 PAFKLRNSSILTFSSELMKRDPCILYEFRANILSAMNDLIETSQKEIVFLLLTFCEKLQ 360
>ref|XP_012455020.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Gossypium raimondii]
Length = 2724
Score = 101 bits (252), Expect = 2e-19
Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 8/180 (4%)
Frame = -3
Query: 518 AFERLSE-LNQEVLNFVSDLILDEISDCI-RDDCFXXXXXXXXXLYPVQSKKRGRSCGCS 345
+F++L+E L + LN + + + EIS+ + C + +Q
Sbjct: 291 SFQKLTEELEAKELNLMWECLYQEISETLAHGSCLHLSRLLSLLISSLQVNSGRGILDYR 350
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKW 183
R+L++VE LV V++PS K +VV+K LQL+L +LD + S IS ++W
Sbjct: 351 RMLEVVESLVLKVVLPSS--KGNGSLSDVVDKVLQLVLHILDGLHGSNNLSTISGCLLQW 408
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
P+F+LRN+SLLTF+ LL +DP + Y F+ + + AMNDL+E E V+ L+L FFER+Q
Sbjct: 409 APIFELRNTSLLTFLRELLLRDPCVIYFFKDYALSAMNDLVESSQEEVLYLLLSFFERLQ 468
>ref|XP_012455019.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Gossypium raimondii]
Length = 2726
Score = 101 bits (252), Expect = 2e-19
Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 8/180 (4%)
Frame = -3
Query: 518 AFERLSE-LNQEVLNFVSDLILDEISDCI-RDDCFXXXXXXXXXLYPVQSKKRGRSCGCS 345
+F++L+E L + LN + + + EIS+ + C + +Q
Sbjct: 291 SFQKLTEELEAKELNLMWECLYQEISETLAHGSCLHLSRLLSLLISSLQVNSGRGILDYR 350
Query: 344 RILQLVEQLVQNVIIPSVGIKAENDGFEVVNKTLQLILCLLD------DPSAISEISVKW 183
R+L++VE LV V++PS K +VV+K LQL+L +LD + S IS ++W
Sbjct: 351 RMLEVVESLVLKVVLPSS--KGNGSLSDVVDKVLQLVLHILDGLHGSNNLSTISGCLLQW 408
Query: 182 DPVFDLRNSSLLTFIEGLLEKDPSISYAFRFHIIRAMNDLIEDLPEAVMNLMLMFFERMQ 3
P+F+LRN+SLLTF+ LL +DP + Y F+ + + AMNDL+E E V+ L+L FFER+Q
Sbjct: 409 APIFELRNTSLLTFLRELLLRDPCVIYFFKDYALSAMNDLVESSQEEVLYLLLSFFERLQ 468