BLASTX nr result

ID: Cinnamomum24_contig00023716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00023716
         (452 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008783216.1| PREDICTED: putative pentatricopeptide repeat...    67   5e-09
ref|XP_010915923.1| PREDICTED: putative pentatricopeptide repeat...    60   5e-07

>ref|XP_008783216.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200 [Phoenix dactylifera]
          Length = 559

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 44/133 (33%), Positives = 69/133 (51%)
 Frame = -1

Query: 401 MVNKRSIRQIASFLQPKFTSYSHERCQHNLRRTERDCCKFQNIILTGYAPGRNFHAERNP 222
           +++   + Q  S L P + SY  +       R+E    +FQNI+  GY P + F+A+ + 
Sbjct: 23  LIDHGYLLQWTSSLFPSYASYKQDELGRKSVRSEGLSGRFQNILSNGYVPCKYFYAQSSS 82

Query: 221 LASTQYDGGCINSRSCTETQAMQGSDNLKCGSDTSTTEYAVMIQNLLKVHHDPIELKSAL 42
               Q     +NS S  E+ ++  +D     +D S T+YA MIQ +LK H    EL+SAL
Sbjct: 83  GTYAQSRSCYMNSFSQIESNSLLNADRAASDND-SITKYAAMIQEILKSHESTSELESAL 141

Query: 41  DQCRLLLTEDLVL 3
           ++    L EDLV+
Sbjct: 142 NRFVPSLGEDLVV 154


>ref|XP_010915923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200 [Elaeis guineensis]
          Length = 565

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
 Frame = -1

Query: 368 SFLQPKFTSYSHERCQHNLRRTERDCCKFQNIILTGYAPGRNFHAERNPLASTQYDGGCI 189
           S L P  TSY  +     + R+E    + QNI+  GY P ++F+A  +    T      I
Sbjct: 34  SSLFPSSTSYKQDELGRKIFRSEGVSGRIQNILSNGYVPCKHFYARSSSGIYTSSRLCHI 93

Query: 188 NSRSCTETQAMQGSD-----NLKCGSDTSTTEYAVMIQNLLKVHHDPIELKSALDQCRLL 24
           +S S  E  ++  +D     +     + S  +YA MIQ +LK H    EL+SAL+Q   +
Sbjct: 94  DSFSQIERNSLLNADCQMHADRTASDNDSIIKYAAMIQEILKSHESTSELESALNQFVPI 153

Query: 23  LTEDLVL 3
           L+EDLV+
Sbjct: 154 LSEDLVV 160


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