BLASTX nr result

ID: Cinnamomum24_contig00023676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00023676
         (272 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHG22383.1| hypothetical protein F383_02496 [Gossypium arboreum]    60   6e-07
ref|XP_010271939.1| PREDICTED: leucine-rich repeat-containing pr...    56   9e-06

>gb|KHG22383.1| hypothetical protein F383_02496 [Gossypium arboreum]
          Length = 417

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
 Frame = -2

Query: 271 EAVMEEVSCLKGLTILEFGFPKVEFLECFLQRSHPWKKGIITSFHFIVG----RYQFRDP 104
           ++++ EVS L GLT L F FP+VE LE FLQ+S  W    +T ++F+VG    R   R P
Sbjct: 89  KSIIYEVSKLTGLTSLSFYFPEVELLELFLQKSAAWIDQCLTEYNFVVGRDIKRIVSRVP 148

Query: 103 PPLWFGYDPEGERTNRMLTFCGYDSISNAIVEVL 2
             +   YD    +T++ L F   + I +AIV+VL
Sbjct: 149 QYVELDYD----QTSQRLRFVNGEKIPDAIVKVL 178


>ref|XP_010271939.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Nelumbo
           nucifera]
          Length = 599

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 36/90 (40%), Positives = 49/90 (54%)
 Frame = -2

Query: 271 EAVMEEVSCLKGLTILEFGFPKVEFLECFLQRSHPWKKGIITSFHFIVGRYQFRDPPPLW 92
           EAV EE++ LK L  L F F K+E    F+Q S  WK   +TSF  +VG    +     +
Sbjct: 254 EAVAEELATLKRLNHLNFFFTKMESFSRFIQESCAWKDKCLTSFRLLVGCDDLKTLHTSY 313

Query: 91  FGYDPEGERTNRMLTFCGYDSISNAIVEVL 2
           F ++ EG R  R+    G + ISN I+EVL
Sbjct: 314 FEHEHEGVRYLRLR---GSNDISNEIMEVL 340


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