BLASTX nr result
ID: Cinnamomum24_contig00023454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00023454
(579 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010275032.1| PREDICTED: pentatricopeptide repeat-containi... 162 1e-37
ref|XP_006836295.1| PREDICTED: pentatricopeptide repeat-containi... 115 2e-23
pdb|4OZS|A Chain A, Rna Binding Protein 96 1e-17
ref|XP_012066574.1| PREDICTED: pentatricopeptide repeat-containi... 96 1e-17
ref|XP_001777347.1| predicted protein [Physcomitrella patens] gi... 95 2e-17
ref|XP_012459090.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
ref|XP_008645840.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays] 92 2e-16
gb|KMZ62968.1| Pentatricopeptide repeat-containing protein [Zost... 91 3e-16
ref|XP_010923963.1| PREDICTED: pentatricopeptide repeat-containi... 91 4e-16
emb|CDP06640.1| unnamed protein product [Coffea canephora] 89 1e-15
ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Sela... 89 1e-15
ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selag... 89 2e-15
ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-15
ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-15
ref|XP_004952738.1| PREDICTED: pentatricopeptide repeat-containi... 88 3e-15
ref|XP_011081976.1| PREDICTED: pentatricopeptide repeat-containi... 88 4e-15
ref|XP_011092997.1| PREDICTED: pentatricopeptide repeat-containi... 88 4e-15
ref|XP_010273577.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 88 4e-15
>ref|XP_010275032.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Nelumbo nucifera]
Length = 598
Score = 162 bits (410), Expect = 1e-37
Identities = 74/111 (66%), Positives = 93/111 (83%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LVH LG+E +V EA KLVNQME ++ +SPDVITYNCLLDGLC GEV++AC+L+L M R
Sbjct: 485 LVHWLGREEKVSEAFKLVNQMETEQRLSPDVITYNCLLDGLCNIGEVDEACRLILAMFRN 544
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHSIPLQRLLTEIV 246
GC PDL+S+NTLING+I +GR +DASRLFE MRGKL HSIPL++L+ +I+
Sbjct: 545 GCKPDLVSFNTLINGMINIGRTDDASRLFEHMRGKLAAHSIPLEKLVNDIL 595
>ref|XP_006836295.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Amborella trichopoda]
gi|548838813|gb|ERM99148.1| hypothetical protein
AMTR_s00092p00018230 [Amborella trichopoda]
Length = 498
Score = 115 bits (287), Expect = 2e-23
Identities = 52/110 (47%), Positives = 78/110 (70%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV+GLG+EGR+ EA +LV +E + +SPD +TYN L + C+ G V AC+++ +M ++
Sbjct: 383 LVNGLGREGRIKEASELVEMLENNGLLSPDAVTYNSLANAWCKRGNVGLACQIVSQMTKK 442
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHSIPLQRLLTEI 249
GC+PDL++YNTL+NGLI G+ +A +FE M G L SIPL+ L+ +I
Sbjct: 443 GCSPDLVTYNTLMNGLINAGKYREARNIFEQMEGGLEADSIPLESLVMDI 492
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV L ++ EA++++ MEA + P+ TYN ++ G V++ +L M
Sbjct: 176 LVKSLCVSDKIEEAIQIIRMMEARGTVLPNTYTYNTVIGAWVDLGRVDEGLRLFERMESL 235
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEIVQEKRCV*F 222
C PD SYN +IN +G A LF+ M+G + P+ + + +++E + +
Sbjct: 236 DCKPDFCSYNIIINHYSKLGEGMRACELFKKMKGNGIQPNENTYKACIMGLIREGKSIEL 295
Query: 221 ISMV 210
++++
Sbjct: 296 LNLI 299
>pdb|4OZS|A Chain A, Rna Binding Protein
Length = 175
Score = 96.3 bits (238), Expect = 1e-17
Identities = 46/95 (48%), Positives = 70/95 (73%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K GR+ EAL+L +M+ ++ + PDV+TYN L+DGL +AG +E+A +L EM +
Sbjct: 8 LIDGLAKAGRLEEALQLFQEMK-EKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEK 66
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
G PD+++YNTLI+GL GR+E+A +LF+ M+ K
Sbjct: 67 GVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEK 101
Score = 96.3 bits (238), Expect = 1e-17
Identities = 46/95 (48%), Positives = 70/95 (73%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K GR+ EAL+L +M+ ++ + PDV+TYN L+DGL +AG +E+A +L EM +
Sbjct: 43 LIDGLAKAGRLEEALQLFQEMK-EKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEK 101
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
G PD+++YNTLI+GL GR+E+A +LF+ M+ K
Sbjct: 102 GVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEK 136
Score = 96.3 bits (238), Expect = 1e-17
Identities = 46/95 (48%), Positives = 70/95 (73%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K GR+ EAL+L +M+ ++ + PDV+TYN L+DGL +AG +E+A +L EM +
Sbjct: 78 LIDGLAKAGRLEEALQLFQEMK-EKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEK 136
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
G PD+++YNTLI+GL GR+E+A +LF+ M+ K
Sbjct: 137 GVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEK 171
Score = 75.9 bits (185), Expect = 1e-11
Identities = 34/66 (51%), Positives = 50/66 (75%)
Frame = -2
Query: 491 DVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTLINGLIGVGRVEDASRLF 312
DV+TYN L+DGL +AG +E+A +L EM +G PD+++YNTLI+GL GR+E+A +LF
Sbjct: 1 DVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLF 60
Query: 311 ECMRGK 294
+ M+ K
Sbjct: 61 QEMKEK 66
Score = 63.5 bits (153), Expect = 7e-08
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K GR+ EAL+L +M+ ++ + PDV+TYN L+DGL +AG +E+A +L EM +
Sbjct: 113 LIDGLAKAGRLEEALQLFQEMK-EKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEK 171
Query: 398 GCNP 387
G P
Sbjct: 172 GVKP 175
>ref|XP_012066574.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Jatropha curcas]
gi|643736223|gb|KDP42598.1| hypothetical protein
JCGZ_24372 [Jatropha curcas]
Length = 657
Score = 95.9 bits (237), Expect = 1e-17
Identities = 50/116 (43%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+HGL R+ EA L+N+M I+PD+IT+N L+DGLC+ G V AC ++ M++R
Sbjct: 246 LIHGLCMSSRLKEAFLLLNEM-LKAHITPDLITFNILVDGLCKCGRVSKACGIVKLMIQR 304
Query: 398 GCNPDLISYNTLINGLIGVGRVEDAS-RLFECMRGKLTPHSIPLQRLLTEIVQEKR 234
G NPD+++YN+LI+GL GR E+AS +L E + +TP+ I L+ + +E R
Sbjct: 305 GMNPDVVTYNSLIHGLCNSGRWEEASVQLNEMLEANITPNLITFNILVDGLCKEGR 360
Score = 70.5 bits (171), Expect = 6e-10
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+HGL GR EA +N+M + I+P++IT+N L+DGLC+ G V A ++ M++R
Sbjct: 316 LIHGLCNSGRWEEASVQLNEM-LEANITPNLITFNILVDGLCKEGRVSKAHGIVKWMIQR 374
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLL 258
G ++++YN+L++G + R+ A +F+ M K TP+ + L+
Sbjct: 375 GIKSNVVTYNSLMDGYCLLNRMNQAREIFDMMLSKGYTPNVVTYSILI 422
Score = 69.3 bits (168), Expect = 1e-09
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+HGL +E R EA++L +++ A F P++ TYN +++GLC+ G+ A +L M+
Sbjct: 141 LIHGLCREDRFDEAVELFDEIVAKGF-KPNIYTYNVIVNGLCKIGKTNVAFGILKRMLEE 199
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEIVQEKR 234
GC P+++S+N +I+ L V +A LF M+ + ++P + L+ + R
Sbjct: 200 GCEPNVVSFNAIIDSLCKDRLVIEALELFLKMKSEGISPSIVTYSSLIHGLCMSSR 255
Score = 68.6 bits (166), Expect = 2e-09
Identities = 39/92 (42%), Positives = 55/92 (59%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV GL K GRV +A +V M ++PDV+TYN L+ GLC +G E+A L EM+
Sbjct: 281 LVDGLCKCGRVSKACGIVKLM-IQRGMNPDVVTYNSLIHGLCNSGRWEEASVQLNEMLEA 339
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
P+LI++N L++GL GRV A + + M
Sbjct: 340 NITPNLITFNILVDGLCKEGRVSKAHGIVKWM 371
Score = 64.3 bits (155), Expect = 4e-08
Identities = 33/94 (35%), Positives = 56/94 (59%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G K + AL L +QM+ + + P++I Y+ L+DG+ + G+VEDA +L +
Sbjct: 488 LIDGFCKHRCLDLALTLFHQMQKNS-LKPNIIVYSTLIDGMFKVGKVEDAKELFSRLSME 546
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRG 297
G PD +YN ++NGL G +++A ++F M G
Sbjct: 547 GLQPDDFTYNIMMNGLCKEGLLDEAFKVFRKMEG 580
Score = 63.2 bits (152), Expect = 9e-08
Identities = 33/95 (34%), Positives = 56/95 (58%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G+ K G+V +A +L +++ E + PD TYN +++GLC+ G +++A K+ +M
Sbjct: 523 LIDGMFKVGKVEDAKELFSRLSM-EGLQPDDFTYNIMMNGLCKEGLLDEAFKVFRKMEGN 581
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
C PD SYN +I G + A++L + M GK
Sbjct: 582 ACLPDSCSYNVIIQGCLWCNDSSMANQLIDEMVGK 616
Score = 62.0 bits (149), Expect = 2e-07
Identities = 34/108 (31%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V+GL K G+ A ++ +M +E P+V+++N ++D LC+ V +A +L L+M
Sbjct: 176 IVNGLCKIGKTNVAFGILKRM-LEEGCEPNVVSFNAIIDSLCKDRLVIEALELFLKMKSE 234
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLL 258
G +P +++Y++LI+GL R+++A L E ++ +TP I L+
Sbjct: 235 GISPSIVTYSSLIHGLCMSSRLKEAFLLLNEMLKAHITPDLITFNILV 282
Score = 58.9 bits (141), Expect = 2e-06
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = -2
Query: 497 SPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTLINGLIGVGRVEDASR 318
SPDV+ Y+ L+DG C+ ++ A L +M + P++I Y+TLI+G+ VG+VEDA
Sbjct: 479 SPDVVAYSSLIDGFCKHRCLDLALTLFHQMQKNSLKPNIIVYSTLIDGMFKVGKVEDAKE 538
Query: 317 LF 312
LF
Sbjct: 539 LF 540
Score = 58.5 bits (140), Expect = 2e-06
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV GL KEGRV +A +V M I +V+TYN L+DG C + A ++ M+ +
Sbjct: 351 LVDGLCKEGRVSKAHGIVKWM-IQRGIKSNVVTYNSLMDGYCLLNRMNQAREIFDMMLSK 409
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLL 258
G P++++Y+ LI+ R+++A RLF+ M K L P+ L+
Sbjct: 410 GYTPNVVTYSILIDRR---KRIDEAMRLFDEMASKGLIPNHFTYNSLI 454
>ref|XP_001777347.1| predicted protein [Physcomitrella patens]
gi|162671323|gb|EDQ57877.1| predicted protein
[Physcomitrella patens]
Length = 621
Score = 95.1 bits (235), Expect = 2e-17
Identities = 52/127 (40%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G GK G + EA L+++M+ + PDV+TY+CL+ GL +A ++++AC++L +M +
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNG-CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKE 318
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEIVQ----EKR 234
GC PD I+YNTLINGL G + DA RLF+ M+ K P + L+T + + E
Sbjct: 319 GCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESA 378
Query: 233 CV*FISM 213
CV F M
Sbjct: 379 CVLFEEM 385
Score = 78.6 bits (192), Expect = 2e-12
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++GLGK G + +A +L ++M++ + +PDV+TY+ L+ L +A VE AC L EM
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKS-KGCNPDVVTYSTLITALGKAARVESACVLFEEMESV 388
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEI 249
G PDL +Y ++I L G+V+DA RLF MRGK L+P I L +
Sbjct: 389 GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439
Score = 77.8 bits (190), Expect = 4e-12
Identities = 50/118 (42%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV LGK G+ EAL+L+ +M D PDV TYNCL+ L +AG + +A L EM R
Sbjct: 85 LVDCLGKAGQFDEALRLLAEMR-DNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRER 143
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM-RGKLTPHSIPLQRLLTEIVQEKRCV 228
GC PD +YN+LI GL VGR + A L E M R P + L+T + ++ V
Sbjct: 144 GCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETV 201
Score = 77.8 bits (190), Expect = 4e-12
Identities = 38/98 (38%), Positives = 65/98 (66%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ LGK GRV +AL+L+++M+ + + P V+TYN L+ G + G++ +A LL EM R
Sbjct: 225 LMDALGKAGRVDDALELLDEMK-ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN 283
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTP 285
GC PD+++Y+ LI GLI ++++A ++ + M + P
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP 321
Score = 73.6 bits (179), Expect = 7e-11
Identities = 41/93 (44%), Positives = 59/93 (63%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++GLGK GR +A++L+ +ME PDV+TY+ L+ GL + GE A KL EM RR
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHG-CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRR 213
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
G PD I++ L++ L GRV+DA L + M+
Sbjct: 214 GRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Score = 71.2 bits (173), Expect = 3e-10
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GLGK+G +A KL +M+ PD IT+ L+D L +AG V+DA +LL EM R
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKR-RGRKPDSITFTALMDALGKAGRVDDALELLDEMKER 248
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQ 243
G P +++YN LI G VG + +A L E R P + L+T +++
Sbjct: 249 GVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Score = 70.9 bits (172), Expect = 4e-10
Identities = 37/93 (39%), Positives = 63/93 (67%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++ L K G+ EA L +++A ++ +PDV++Y+CL++ L RAG+ E A +++ EM +
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKW-TPDVVSYSCLINSLGRAGKWEAALEVVAEMQAK 73
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
GC P+L +YNTL++ L G+ ++A RL MR
Sbjct: 74 GCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR 106
Score = 70.1 bits (170), Expect = 8e-10
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ LGK GR+ EA L +M + PD TYN L+ GL + G + A +LL EM R
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCV-PDTFTYNSLIYGLGKVGRSQKAMELLEEMERH 178
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLL 258
GC PD+++Y++LI GL G A +LF+ M+ + P SI L+
Sbjct: 179 GCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALM 226
Score = 69.3 bits (168), Expect = 1e-09
Identities = 39/93 (41%), Positives = 61/93 (65%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++ LG+ G+ AL++V +M+A + P++ TYN L+D L +AG+ ++A +LL EM
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQA-KGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDN 108
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
GC PD+ +YN LI+ L GR+ +A LF MR
Sbjct: 109 GCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMR 141
Score = 68.9 bits (167), Expect = 2e-09
Identities = 38/93 (40%), Positives = 58/93 (62%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ LGK RV A L +ME+ I PD+ TY ++ L +AG+V+DA +L EM +
Sbjct: 365 LITALGKAARVESACVLFEEMESVG-IQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
G +PD+I+YN +N L GR ++A ++FE M+
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456
Score = 63.5 bits (153), Expect = 7e-08
Identities = 34/94 (36%), Positives = 53/94 (56%)
Frame = -2
Query: 575 VHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRG 396
++ LG+ GR EA K+ M+ + PDV TY+ LL GL + EV+DAC LL E++ +G
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLL-PDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Query: 395 CNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
C D + ++ + L G V++A L + K
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSK 528
Score = 61.2 bits (147), Expect = 4e-07
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = -2
Query: 566 LGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNP 387
LGK G+V +A +L ++M + +SPDVITYN L+ L R G ++A K+ +M G P
Sbjct: 404 LGKAGQVDDADRLFSEMRG-KGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP 462
Query: 386 DLISYNTLINGLIGVGRVEDASRLFE 309
D+ +Y+ L+ GL V+DA L +
Sbjct: 463 DVATYDALLLGLSKTKEVDDACGLLK 488
Score = 57.0 bits (136), Expect = 7e-06
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Frame = -2
Query: 554 GRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLIS 375
G V EA +L+ Q + + P +YN L+D L +AG V +A L ++ +G PD++S
Sbjct: 513 GNVDEAHELL-QFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVS 571
Query: 374 YNTLINGLIGVGRVEDASRLFECM--RG-KLTPHS 279
Y++LI+ L G+++ A L E M RG KL+P S
Sbjct: 572 YSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRS 606
>ref|XP_012459090.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Gossypium raimondii]
gi|763809797|gb|KJB76699.1| hypothetical protein
B456_012G101800 [Gossypium raimondii]
Length = 753
Score = 91.7 bits (226), Expect = 2e-16
Identities = 44/116 (37%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LVHG KEGRV EAL + +M ++ PD T+N L++GLC+AG VE A +++ M+R
Sbjct: 265 LVHGFCKEGRVEEALDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLRE 324
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEIVQEKR 234
G +PD+ +YN+LI+GL +G +E+A + + M + +P+++ L++ + +E +
Sbjct: 325 GFDPDVFTYNSLISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQ 380
Score = 84.3 bits (207), Expect = 4e-14
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K RV EA +L++QM E + PD TYN LL CR+G+++ A ++ M
Sbjct: 511 LIDGLCKNRRVEEAAQLMDQMLM-EGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTMTSN 569
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK---LTPHS 279
GC PD+++Y TLI GL GRVE AS+L ++ K LTPH+
Sbjct: 570 GCEPDIVTYGTLIGGLCKAGRVEVASKLLRTIQMKGMVLTPHA 612
Score = 81.3 bits (199), Expect = 3e-13
Identities = 41/95 (43%), Positives = 64/95 (67%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV+GL K G V AL++++ M + F PDV TYN L+ GLC+ GE+E+A ++L +MV R
Sbjct: 301 LVNGLCKAGFVEHALEIMDVMLREGF-DPDVFTYNSLISGLCKIGEIEEAVEVLDQMVSR 359
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
C+P+ ++YNTLI+ L ++E+A+ L + K
Sbjct: 360 DCSPNTVTYNTLISTLCKENQIEEATELARVLTSK 394
Score = 64.3 bits (155), Expect = 4e-08
Identities = 38/101 (37%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = -2
Query: 554 GRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLIS 375
G++ EAL L+ +ME+ + +VITYN L+DG C+ +++A ++ EM +G + + ++
Sbjct: 449 GKLEEALSLLKEMESSG-CARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVT 507
Query: 374 YNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLT 255
YNTLI+GL RVE+A++L + M + L P LLT
Sbjct: 508 YNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLT 548
Score = 63.9 bits (154), Expect = 5e-08
Identities = 34/95 (35%), Positives = 58/95 (61%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K G + EA+++++QM + + SP+ +TYN L+ LC+ ++E+A +L + +
Sbjct: 336 LISGLCKIGEIEEAVEVLDQMVSRD-CSPNTVTYNTLISTLCKENQIEEATELARVLTSK 394
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
G PD+ ++N+LI GL A LFE M+ K
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNK 429
Score = 63.9 bits (154), Expect = 5e-08
Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL AL+L +M+ ++ PD TYN L+D C G++E+A LL EM
Sbjct: 406 LIQGLCLTRNHTLALELFEEMK-NKGCQPDEFTYNMLIDSFCCRGKLEEALSLLKEMESS 464
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEIVQEKR 234
GC ++I+YNTLI+G R+++A +F+ M + ++ +S+ L+ + + +R
Sbjct: 465 GCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGLCKNRR 520
Score = 58.2 bits (139), Expect = 3e-06
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L KE ++ EA +L + + + I PDV T+N L+ GLC A +L EM +
Sbjct: 371 LISTLCKENQIEEATELARVLTS-KGILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNK 429
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFE------CMRGKLTPHSI 276
GC PD +YN LI+ G++E+A L + C R +T +++
Sbjct: 430 GCQPDEFTYNMLIDSFCCRGKLEEALSLLKEMESSGCARNVITYNTL 476
>ref|XP_008645840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Zea mays]
Length = 735
Score = 91.7 bits (226), Expect = 2e-16
Identities = 44/114 (38%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V L ++G V A+++V QM ++ SPD++TYNC++DGLC ++DA +LL ++
Sbjct: 419 VVASLCQKGLVDRAIRVVEQM-SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 477
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
GC PD++++NTL+ GL GV R EDA +L MR P + ++T + Q+
Sbjct: 478 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQK 531
Score = 67.8 bits (164), Expect = 4e-09
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V L ++G V A+++V+ M ++ D++TY+ +LDGLC G V+DA +LL +
Sbjct: 314 IVTSLCQQGLVDRAIEVVDHMSEHGCVA-DIVTYSSILDGLCDVGRVDDAVELLSRLKSY 372
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
GC PD I+Y T++ GL + E A L E + P + ++ + Q+
Sbjct: 373 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 426
Score = 64.3 bits (155), Expect = 4e-08
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L GR+ +AL + + M SP V+TY+ LLD C+ A LL EM +
Sbjct: 174 LIRALCVRGRIPDALAVFDDM-LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 232
Query: 398 GCNPDLISYNTLINGLIGVGRVEDA 324
GC PD+++YN LIN + G V++A
Sbjct: 233 GCEPDIVTYNVLINAMCNEGDVDEA 257
Score = 64.3 bits (155), Expect = 4e-08
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = -2
Query: 560 KEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDL 381
KE +A+ L+++M A + PD++TYN L++ +C G+V++A +L + GC PD
Sbjct: 215 KESGYRQAMALLDEMRA-KGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDA 273
Query: 380 ISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
++Y ++ L G R ++ L E P + ++T + Q+
Sbjct: 274 VTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQ 321
Score = 60.1 bits (144), Expect = 8e-07
Identities = 30/92 (32%), Positives = 53/92 (57%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL E + +A++L++ +++ PD++T+N LL GLC EDA +L+ M+R
Sbjct: 454 IIDGLCNESCIDDAMELLSDLQSCG-CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRS 512
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
C PD +++NT+I L G + A + M
Sbjct: 513 NCPPDELTFNTVITSLCQKGLLTQAIETLKIM 544
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/95 (31%), Positives = 51/95 (53%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V+G + GR+ +A +L+N M PD T+N L+ LC G + DA + +M+ R
Sbjct: 142 MVNGYCRAGRIEDARRLINGMP----FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHR 197
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
GC+P +++Y+ L++ A L + MR K
Sbjct: 198 GCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 232
Score = 57.0 bits (136), Expect = 7e-06
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL GRV +A++L++++++ PD I Y +L GLC + E A +L+ EM+
Sbjct: 349 ILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCS 407
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
C PD +++NT++ L G V+ A R+ E M
Sbjct: 408 DCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM 439
Score = 56.6 bits (135), Expect = 9e-06
Identities = 26/81 (32%), Positives = 52/81 (64%)
Frame = -2
Query: 542 EALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTL 363
E +L+ +M ++ +PD +T+N ++ LC+ G V+ A +++ M GC D+++Y+++
Sbjct: 291 EVEELLAEMTSNN-CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 349
Query: 362 INGLIGVGRVEDASRLFECMR 300
++GL VGRV+DA L ++
Sbjct: 350 LDGLCDVGRVDDAVELLSRLK 370
>gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 91.7 bits (226), Expect = 2e-16
Identities = 44/114 (38%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V L ++G V A+++V QM ++ SPD++TYNC++DGLC ++DA +LL ++
Sbjct: 502 VVASLCQKGLVDRAIRVVEQM-SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 560
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
GC PD++++NTL+ GL GV R EDA +L MR P + ++T + Q+
Sbjct: 561 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQK 614
Score = 67.8 bits (164), Expect = 4e-09
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V L ++G V A+++V+ M ++ D++TY+ +LDGLC G V+DA +LL +
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVA-DIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
GC PD I+Y T++ GL + E A L E + P + ++ + Q+
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509
Score = 64.3 bits (155), Expect = 4e-08
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L GR+ +AL + + M SP V+TY+ LLD C+ A LL EM +
Sbjct: 257 LIRALCVRGRIPDALAVFDDM-LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 315
Query: 398 GCNPDLISYNTLINGLIGVGRVEDA 324
GC PD+++YN LIN + G V++A
Sbjct: 316 GCEPDIVTYNVLINAMCNEGDVDEA 340
Score = 64.3 bits (155), Expect = 4e-08
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = -2
Query: 560 KEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDL 381
KE +A+ L+++M A + PD++TYN L++ +C G+V++A +L + GC PD
Sbjct: 298 KESGYRQAMALLDEMRA-KGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDA 356
Query: 380 ISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
++Y ++ L G R ++ L E P + ++T + Q+
Sbjct: 357 VTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQ 404
Score = 60.1 bits (144), Expect = 8e-07
Identities = 30/92 (32%), Positives = 53/92 (57%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL E + +A++L++ +++ PD++T+N LL GLC EDA +L+ M+R
Sbjct: 537 IIDGLCNESCIDDAMELLSDLQSCG-CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRS 595
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
C PD +++NT+I L G + A + M
Sbjct: 596 NCPPDELTFNTVITSLCQKGLLTQAIETLKIM 627
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/95 (31%), Positives = 51/95 (53%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V+G + GR+ +A +L+N M PD T+N L+ LC G + DA + +M+ R
Sbjct: 225 MVNGYCRAGRIEDARRLINGMP----FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHR 280
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
GC+P +++Y+ L++ A L + MR K
Sbjct: 281 GCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 315
Score = 57.0 bits (136), Expect = 7e-06
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL GRV +A++L++++++ PD I Y +L GLC + E A +L+ EM+
Sbjct: 432 ILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCS 490
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
C PD +++NT++ L G V+ A R+ E M
Sbjct: 491 DCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM 522
Score = 56.6 bits (135), Expect = 9e-06
Identities = 26/81 (32%), Positives = 52/81 (64%)
Frame = -2
Query: 542 EALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTL 363
E +L+ +M ++ +PD +T+N ++ LC+ G V+ A +++ M GC D+++Y+++
Sbjct: 374 EVEELLAEMTSNN-CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 432
Query: 362 INGLIGVGRVEDASRLFECMR 300
++GL VGRV+DA L ++
Sbjct: 433 LDGLCDVGRVDDAVELLSRLK 453
>gb|KMZ62968.1| Pentatricopeptide repeat-containing protein [Zostera marina]
Length = 775
Score = 91.3 bits (225), Expect = 3e-16
Identities = 45/88 (51%), Positives = 64/88 (72%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV+GL + G V AL++++ M + F PD+ITYN LL GLC++GE+EDA +L+ EM RR
Sbjct: 322 LVNGLCQAGHVSHALEILDVMLQEGF-DPDIITYNTLLSGLCKSGEIEDAIELVDEMTRR 380
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRL 315
C P+++SYNTLI+ L G R+E+A L
Sbjct: 381 NCFPNMVSYNTLISTLCGRNRIEEAMEL 408
Score = 77.8 bits (190), Expect = 4e-12
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEA----DEFISPDVITYNCLLDGLCRAGEVEDACKLLLE 411
L+HG K+G+V EAL + + + PD T+N L++GLC+AG V A ++L
Sbjct: 282 LIHGFCKQGKVEEALGFIQKESSASKRGSRFHPDRFTFNTLVNGLCQAGHVSHALEILDV 341
Query: 410 MVRRGCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQEKR 234
M++ G +PD+I+YNTL++GL G +EDA L E R P+ + L++ + R
Sbjct: 342 MLQEGFDPDIITYNTLLSGLCKSGEIEDAIELVDEMTRRNCFPNMVSYNTLISTLCGRNR 401
Score = 73.2 bits (178), Expect = 9e-11
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K R A +L++QM E + PD +TYN LL C+ G+++ A ++ M
Sbjct: 535 LIDGLCKNKRFNAATELMDQMLM-EGLKPDKLTYNSLLSYHCKNGDIKRAADVMQTMSSN 593
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK---LTPHS 279
GC PD+I+Y TLI GL GR + AS+L ++ K L PH+
Sbjct: 594 GCEPDMITYGTLIGGLCKAGRTQVASKLLRSIQMKGMVLAPHA 636
Score = 67.8 bits (164), Expect = 4e-09
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLC---RAGEVEDACKLLLEM 408
L+ GL K G G AL+L N+M+ D PD TYN L+D C R ++ A LL EM
Sbjct: 427 LIGGLCKVGDHGVALELFNEMK-DGGCPPDEFTYNVLIDHFCSSHRGKQLGIALDLLKEM 485
Query: 407 VRRGCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHS-IPLQRLLTEIVQEKR 234
R GC +I+YNTLI+GL R+E+A +F+ M + H + L+ + + KR
Sbjct: 486 ERSGCLRSVITYNTLIDGLCKNRRIEEAEEMFDQMDMQGISHDLVTYNSLIDGLCKNKR 544
Score = 59.7 bits (143), Expect = 1e-06
Identities = 32/93 (34%), Positives = 53/93 (56%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K G + +A++LV++M P++++YN L+ LC +E+A +L + +
Sbjct: 357 LLSGLCKSGEIEDAIELVDEMTRRNCF-PNMVSYNTLISTLCGRNRIEEAMELAHGLADK 415
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
G PD+ ++N LI GL VG A LF M+
Sbjct: 416 GLKPDIFTFNALIGGLCKVGDHGVALELFNEMK 448
Score = 58.2 bits (139), Expect = 3e-06
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = -2
Query: 551 RVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISY 372
++G AL L+ +ME + VITYN L+DGLC+ +E+A ++ +M +G + DL++Y
Sbjct: 474 QLGIALDLLKEMERSGCLR-SVITYNTLIDGLCKNRRIEEAEEMFDQMDMQGISHDLVTY 532
Query: 371 NTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLT 255
N+LI+GL R A+ L + M + L P + LL+
Sbjct: 533 NSLIDGLCKNKRFNAATELMDQMLMEGLKPDKLTYNSLLS 572
>ref|XP_010923963.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Elaeis guineensis]
Length = 770
Score = 90.9 bits (224), Expect = 4e-16
Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+HG K+GRV EAL L+ Q EA + SPD T+N L+ GLCRAG + A ++L M++
Sbjct: 280 LIHGYCKQGRVEEALGLI-QEEAVKGFSPDKFTFNTLVSGLCRAGHIRHALEILDVMLQE 338
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM-RGKLTPHSIPLQRLLTEIVQEKR 234
G +PD+++YNTLI+GL +G +E+A+ L M P+++ L++ + EKR
Sbjct: 339 GHDPDVVTYNTLISGLCKLGEIEEATCLLNQMAESGCLPNTVTYNTLISTMCTEKR 394
Score = 73.2 bits (178), Expect = 9e-11
Identities = 37/88 (42%), Positives = 57/88 (64%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV GL + G + AL++++ M E PDV+TYN L+ GLC+ GE+E+A LL +M
Sbjct: 315 LVSGLCRAGHIRHALEILDVM-LQEGHDPDVVTYNTLISGLCKLGEIEEATCLLNQMAES 373
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRL 315
GC P+ ++YNTLI+ + R+++A L
Sbjct: 374 GCLPNTVTYNTLISTMCTEKRLDEAIEL 401
Score = 70.1 bits (170), Expect = 8e-10
Identities = 39/112 (34%), Positives = 61/112 (54%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K RV EA +L++QM E + PD +TYN LL + G ++ A ++ M
Sbjct: 525 LIDGLCKSNRVDEATELMDQMIM-EGLKPDKLTYNSLLTHYGKQGNIKKAADIVQMMTSN 583
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHSIPLQRLLTEIVQ 243
GC PD+++Y TLI GL GR + A +L ++ K +P + ++Q
Sbjct: 584 GCEPDIVTYGTLIGGLCKAGRTQVACKLLRTIQMK---GMVPTPKAYNPVIQ 632
Score = 69.7 bits (169), Expect = 1e-09
Identities = 39/92 (42%), Positives = 56/92 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K G AL++ +M++ SPD TYN L+D LC GE++ A LL EM
Sbjct: 420 LISGLCKAGDYELALRMFEEMKSCG-CSPDEFTYNILIDHLCLNGELQTALGLLKEMELN 478
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC +++YNTLI+GL R+E+A +F+ M
Sbjct: 479 GCARSVVTYNTLIDGLCKNMRIEEAEEIFDQM 510
Score = 67.0 bits (162), Expect = 6e-09
Identities = 32/92 (34%), Positives = 60/92 (65%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K R+ EA ++ +QME + +S +++TYN L+DGLC++ V++A +L+ +M+
Sbjct: 490 LIDGLCKNMRIEEAEEIFDQMEL-QGVSRNLVTYNTLIDGLCKSNRVDEATELMDQMIME 548
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G PD ++YN+L+ G ++ A+ + + M
Sbjct: 549 GLKPDKLTYNSLLTHYGKQGNIKKAADIVQMM 580
Score = 65.5 bits (158), Expect = 2e-08
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K G + EA L+NQM A+ P+ +TYN L+ +C +++A +L ++ +
Sbjct: 350 LISGLCKLGEIEEATCLLNQM-AESGCLPNTVTYNTLISTMCTEKRLDEAIELARQLTLK 408
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
G PD+ ++N+LI+GL G E A R+FE M+
Sbjct: 409 GLLPDVYTFNSLISGLCKAGDYELALRMFEEMK 441
Score = 63.9 bits (154), Expect = 5e-08
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L G + AL L+ +ME + + V+TYN L+DGLC+ +E+A ++ +M +
Sbjct: 455 LIDHLCLNGELQTALGLLKEMELNG-CARSVVTYNTLIDGLCKNMRIEEAEEIFDQMELQ 513
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM-RGKLTPHSIPLQRLLT 255
G + +L++YNTLI+GL RV++A+ L + M L P + LLT
Sbjct: 514 GVSRNLVTYNTLIDGLCKSNRVDEATELMDQMIMEGLKPDKLTYNSLLT 562
Score = 63.9 bits (154), Expect = 5e-08
Identities = 35/93 (37%), Positives = 50/93 (53%)
Frame = -2
Query: 563 GKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPD 384
GK+G + +A +V QM PD++TY L+ GLC+AG + ACKLL + +G P
Sbjct: 565 GKQGNIKKAADIV-QMMTSNGCEPDIVTYGTLIGGLCKAGRTQVACKLLRTIQMKGMVPT 623
Query: 383 LISYNTLINGLIGVGRVEDASRLFECMRGKLTP 285
+YN +I L + +A RLF M K P
Sbjct: 624 PKAYNPVIQSLFKQRKTREAIRLFREMEEKGEP 656
Score = 62.4 bits (150), Expect = 2e-07
Identities = 35/92 (38%), Positives = 54/92 (58%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ + E R+ EA++L Q+ + PDV T+N L+ GLC+AG+ E A ++ EM
Sbjct: 385 LISTMCTEKRLDEAIELARQLTLKGLL-PDVYTFNSLISGLCKAGDYELALRMFEEMKSC 443
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC+PD +YN LI+ L G ++ A L + M
Sbjct: 444 GCSPDEFTYNILIDHLCLNGELQTALGLLKEM 475
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/92 (33%), Positives = 52/92 (56%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G +EG + AL++ ++M I +V T N L+ G C+ G VE+A L+ E +
Sbjct: 245 LMQGFIEEGNMEGALRMKSRMSEMRCIQTNV-TVNVLIHGYCKQGRVEEALGLIQEEAVK 303
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G +PD ++NTL++GL G + A + + M
Sbjct: 304 GFSPDKFTFNTLVSGLCRAGHIRHALEILDVM 335
>emb|CDP06640.1| unnamed protein product [Coffea canephora]
Length = 771
Score = 89.4 bits (220), Expect = 1e-15
Identities = 42/116 (36%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L HG KEG++ +AL+ + +M A E+ PD TYN L++GLC+AG+V+ + ++L M++
Sbjct: 284 LTHGFCKEGKIEQALEFIQEM-ASEWFHPDQFTYNTLINGLCKAGQVKHSIEVLDLMLQE 342
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEIVQEKR 234
G +PD+ +YN+LI+GL +G VE+A + M + +P+++ +++ + +E R
Sbjct: 343 GFDPDVFTYNSLISGLCKIGEVEEAKEVLNQMLSRDCSPNAVTYNTIISTLCKENR 398
Score = 78.6 bits (192), Expect = 2e-12
Identities = 38/95 (40%), Positives = 65/95 (68%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++GL K G+V ++++++ M + F PDV TYN L+ GLC+ GEVE+A ++L +M+ R
Sbjct: 319 LINGLCKAGQVKHSIEVLDLMLQEGF-DPDVFTYNSLISGLCKIGEVEEAKEVLNQMLSR 377
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
C+P+ ++YNT+I+ L RV++A+ L + K
Sbjct: 378 DCSPNAVTYNTIISTLCKENRVQEATNLARALTEK 412
Score = 78.6 bits (192), Expect = 2e-12
Identities = 40/95 (42%), Positives = 58/95 (61%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++GL K RV EA +L++ M E + PD TYN LL CR G+++ A +++ M
Sbjct: 529 LINGLCKSNRVEEAYQLMDHMIM-EGLKPDKFTYNSLLSHFCRGGDIKKATEIVQSMTTN 587
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
GC PD+++Y TLI GL RVE AS+L ++ K
Sbjct: 588 GCEPDIVTYGTLIQGLCKANRVEVASKLLRSIQMK 622
Score = 70.1 bits (170), Expect = 8e-10
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K G V EA +++NQM + + SP+ +TYN ++ LC+ V++A L + +
Sbjct: 354 LISGLCKIGEVEEAKEVLNQMLSRD-CSPNAVTYNTIISTLCKENRVQEATNLARALTEK 412
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
G PD+ ++N+LI GL G A LFE M+GK
Sbjct: 413 GIFPDVGTFNSLIQGLCLTGNYHGAKELFEEMKGK 447
Score = 63.9 bits (154), Expect = 5e-08
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = -2
Query: 554 GRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLIS 375
G++ EA ++ +ME + ITYN L+DG C+ ++E+A ++ EM +G + +L++
Sbjct: 467 GKMNEAFNMLKEMELSG-CARSAITYNTLIDGFCKNKKLEEAEEIFDEMELQGVSRNLVT 525
Query: 374 YNTLINGLIGVGRVEDASRLFECM 303
YNTLINGL RVE+A +L + M
Sbjct: 526 YNTLINGLCKSNRVEEAYQLMDHM 549
Score = 62.4 bits (150), Expect = 2e-07
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ G +EG + AL++ QMEA S + IT N L G C+ G++E A + + EM
Sbjct: 249 IMQGFIEEGNLEGALRVKGQMEAVGCASSN-ITVNVLTHGFCKEGKIEQALEFIQEMASE 307
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
+PD +YNTLINGL G+V+ + + + M
Sbjct: 308 WFHPDQFTYNTLINGLCKAGQVKHSIEVLDLM 339
Score = 61.6 bits (148), Expect = 3e-07
Identities = 29/92 (31%), Positives = 58/92 (63%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G K ++ EA ++ ++ME + +S +++TYN L++GLC++ VE+A +L+ M+
Sbjct: 494 LIDGFCKNKKLEEAEEIFDEMEL-QGVSRNLVTYNTLINGLCKSNRVEEAYQLMDHMIME 552
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G PD +YN+L++ G ++ A+ + + M
Sbjct: 553 GLKPDKFTYNSLLSHFCRGGDIKKATEIVQSM 584
Score = 61.2 bits (147), Expect = 4e-07
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ L KE RV EA L + ++ I PDV T+N L+ GLC G A +L EM +
Sbjct: 389 IISTLCKENRVQEATNLARAL-TEKGIFPDVGTFNSLIQGLCLTGNYHGAKELFEEMKGK 447
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFE------CMRGKLTPHSI 276
GC PD +YN LI+ + G++ +A + + C R +T +++
Sbjct: 448 GCRPDEFTYNMLIDCVCSGGKMNEAFNMLKEMELSGCARSAITYNTL 494
Score = 59.3 bits (142), Expect = 1e-06
Identities = 33/92 (35%), Positives = 51/92 (55%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL G A +L +M+ + PD TYN L+D +C G++ +A +L EM
Sbjct: 424 LIQGLCLTGNYHGAKELFEEMKG-KGCRPDEFTYNMLIDCVCSGGKMNEAFNMLKEMELS 482
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC I+YNTLI+G ++E+A +F+ M
Sbjct: 483 GCARSAITYNTLIDGFCKNKKLEEAEEIFDEM 514
>ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Solanum tuberosum]
Length = 1080
Score = 89.4 bits (220), Expect = 1e-15
Identities = 50/113 (44%), Positives = 71/113 (62%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GLGKEG++ EA +L++ M A +P+ ITYN LLD LC+ GEV+ A LL +M
Sbjct: 551 LLAGLGKEGKIREAYELLDSM-ALHGCAPNTITYNTLLDSLCKNGEVDTALTLLYQMTGP 609
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHSIPLQRLLTEIVQE 240
C PD+ SYNT+I GL RV +A LF M+ K+ P + + LL +V++
Sbjct: 610 NCFPDVFSYNTVIFGLAKEKRVTEAFLLFHQMKKKMYPDCVTVYALLPILVKD 662
Score = 72.8 bits (177), Expect = 1e-10
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++G GK G + A L N+M E + PD+ TY L+D LC A +V+DA E+
Sbjct: 903 LINGFGKAGDLKAACDLFNRMNK-EGVRPDLKTYTILVDCLCSARKVDDALHYFEELKSA 961
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPH 282
G +PDLISYN +INGL G++++A L + M+ + +TP+
Sbjct: 962 GLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRGITPN 1001
Score = 70.5 bits (171), Expect = 6e-10
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Frame = -2
Query: 575 VHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRG 396
++ + + GR+GEA ++ + + ++ P+ ITYN ++ AG+V++A KLL EM+ G
Sbjct: 447 LYSVAEMGRLGEAKRIFDGIRESGYV-PNSITYNMMMKCYSNAGKVDEAIKLLSEMIESG 505
Query: 395 CNPDLISYNTLINGLIGVGRVEDASRLFECMRG-KLTPHSIPLQRLLTEIVQE 240
C+PD+I N+LI+ L GR DA F ++ KLTP + LL + +E
Sbjct: 506 CDPDVIVVNSLIDILYKDGRASDAWATFYSLKDMKLTPTVVTYNTLLAGLGKE 558
Score = 63.5 bits (153), Expect = 7e-08
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L K+GR +A ++ D ++P V+TYN LL GL + G++ +A +LL M
Sbjct: 516 LIDILYKDGRASDAWATFYSLK-DMKLTPTVVTYNTLLAGLGKEGKIREAYELLDSMALH 574
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRG-KLTPHSIPLQRLLTEIVQEKR 234
GC P+ I+YNTL++ L G V+ A L M G P ++ + +EKR
Sbjct: 575 GCAPNTITYNTLLDSLCKNGEVDTALTLLYQMTGPNCFPDVFSYNTVIFGLAKEKR 630
Score = 63.5 bits (153), Expect = 7e-08
Identities = 35/90 (38%), Positives = 59/90 (65%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV L +V +AL ++++ + PD+I+YN +++GL ++G++++A LL EM R
Sbjct: 938 LVDCLCSARKVDDALHYFEELKSAG-LDPDLISYNLMINGLGKSGKMKEALHLLDEMKSR 996
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFE 309
G P+L +YNTLI L VG +E+A R++E
Sbjct: 997 GITPNLYTYNTLIFNLGIVGMLEEAGRMYE 1026
Score = 63.2 bits (152), Expect = 9e-08
Identities = 36/101 (35%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+++GLGK G++ EAL L+++M++ I+P++ TYN L+ L G +E+A ++ E+ +
Sbjct: 973 MINGLGKSGKMKEALHLLDEMKS-RGITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQF 1031
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFE-CMRGKLTPHS 279
G PD+ +YN LI G G + A ++E M G +P+S
Sbjct: 1032 GLEPDVFTYNALIRGYSKSGDPDGAYAIYEKMMVGGCSPNS 1072
Score = 61.2 bits (147), Expect = 4e-07
Identities = 35/85 (41%), Positives = 49/85 (57%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV GL A L +M+ +PDV TYN LD L ++G+V++ +L EM+ R
Sbjct: 762 LVEGLLNVNLKELAWHLFKEMKNAAGCAPDVYTYNLFLDELGKSGKVDELFELYEEMLHR 821
Query: 398 GCNPDLISYNTLINGLIGVGRVEDA 324
GC P I+YN LI+GL+ +VE A
Sbjct: 822 GCKPIAITYNILISGLVKSNKVERA 846
Score = 60.1 bits (144), Expect = 8e-07
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L G + +++MEAD + DV+++ L+D LC+ G+V +A L M +
Sbjct: 306 LLDRLSDRGDLDSVRDFLDRMEADGY-KADVVSFTILVDALCKVGKVSEAFATLDVMKEK 364
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G P+L +YN+LI GL+ RV +A LF+ M
Sbjct: 365 GILPNLHTYNSLIRGLLRKKRVNEALELFDSM 396
>ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein
SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 89.4 bits (220), Expect = 1e-15
Identities = 42/92 (45%), Positives = 65/92 (70%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G + R+ +A +++ M ISPD++TYNCLLDGLC+AG++E+A +LL MV +
Sbjct: 308 LIGGFSRADRLADAYRVMEDM-FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEK 366
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
C PD+++Y+ L+NGL +G+V+DA L E M
Sbjct: 367 DCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398
Score = 81.3 bits (199), Expect = 3e-13
Identities = 38/93 (40%), Positives = 66/93 (70%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K G++ EA +L+ M ++ +PDV+TY+ L++GLC+ G+V+DA LL M+ R
Sbjct: 343 LLDGLCKAGKLEEAHELLEVM-VEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER 401
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
GC P+L+++NT+I+G G+V++ ++ E M+
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434
Score = 75.9 bits (185), Expect = 1e-11
Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+HGL + R+ EA +L+++M + PD YNCL+ GLC+ G+++ A +L M+ R
Sbjct: 98 LIHGLCQCQRIDEAYQLLDEMIQKD-CHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER 156
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR-GKLTPHSIPLQRLLTEIVQEKR 234
C PD+I+Y +LI G +++A +L E M+ LTP ++ LL + ++ +
Sbjct: 157 SCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQ 212
Score = 72.8 bits (177), Expect = 1e-10
Identities = 34/95 (35%), Positives = 63/95 (66%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++GL K+ ++ E KL+ +M + PD +YN ++ LC +G+ E+A K+L +M+ +
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEM-VEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
C PD+++YN+L++G V ++++A RL E M G+
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296
Score = 71.2 bits (173), Expect = 3e-10
Identities = 36/92 (39%), Positives = 57/92 (61%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G + + EA KL+ +M+ + ++PD + YN LL+GLC+ ++E+ KLL EMV
Sbjct: 168 LIVGCCQTNALDEARKLMEKMK-ESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA 226
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G PD SYNT++ L G+ E+A ++ E M
Sbjct: 227 GREPDTFSYNTVVACLCESGKYEEAGKILEKM 258
Score = 70.1 bits (170), Expect = 8e-10
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = -2
Query: 566 LGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNP 387
L + G+ EA K++ +M ++ PDV+TYN L+DG C+ ++++A +LL +MV R C P
Sbjct: 242 LCESGKYEEAGKILEKM-IEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300
Query: 386 DLISYNTLINGLIGVGRVEDASRLFECM-RGKLTPHSIPLQRLL 258
+I+Y TLI G R+ DA R+ E M + ++P + LL
Sbjct: 301 TVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344
Score = 70.1 bits (170), Expect = 8e-10
Identities = 33/85 (38%), Positives = 58/85 (68%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV+GL K G+V +A +L+ +M + P+++T+N ++DG C+AG+V++ K+L M
Sbjct: 378 LVNGLCKLGKVDDA-RLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Query: 398 GCNPDLISYNTLINGLIGVGRVEDA 324
C PD+++Y+TLI+G R++DA
Sbjct: 437 SCTPDVVTYSTLIDGYCKANRMQDA 461
Score = 66.6 bits (161), Expect = 8e-09
Identities = 35/92 (38%), Positives = 56/92 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K G++ +A + V +M + PDVITY L+ G C+ +++A KL+ +M
Sbjct: 133 LIAGLCKMGKI-DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES 191
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G PD ++YN L+NGL ++E+ S+L E M
Sbjct: 192 GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM 223
Score = 66.2 bits (160), Expect = 1e-08
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G K ++ EA +L+ M +P VITY L+ G RA + DA +++ +M +
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRR-CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKA 331
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-----LTPHSIPLQ----------- 267
G +PDL++YN L++GL G++E+A L E M K + +SI +
Sbjct: 332 GISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDA 391
Query: 266 RLLTEIVQEKRC 231
RLL E++ E+ C
Sbjct: 392 RLLLEMMLERGC 403
Score = 65.9 bits (159), Expect = 1e-08
Identities = 33/93 (35%), Positives = 59/93 (63%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL R EALK++ Q+ ++ P++ TY+ L++GLC+ VEDA +L M+ +
Sbjct: 512 IIGGLCDVERGDEALKML-QVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEK 570
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
GC PD+ +Y +LI+G + +++ A + F+ MR
Sbjct: 571 GCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603
Score = 64.7 bits (156), Expect = 3e-08
Identities = 32/92 (34%), Positives = 56/92 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ G K G+V E K++ M+ + +PDV+TY+ L+DG C+A ++DA +L
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMK-EVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------ 465
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G +PD SY++++ GL G+VE+A + + M
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLM 497
Score = 63.2 bits (152), Expect = 9e-08
Identities = 34/95 (35%), Positives = 54/95 (56%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++GL K RV +A+ +++ M ++ PDV TY L+DG C+ +++ A + M
Sbjct: 547 LINGLCKTKRVEDAINVLDVM-LEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDS 605
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
GC PD ++YN LI+G G VE A + + M K
Sbjct: 606 GCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/83 (31%), Positives = 49/83 (59%)
Frame = -2
Query: 551 RVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISY 372
++G+ + ++ + SP TY L+ GLC+ +++A +LL EM+++ C+PD Y
Sbjct: 71 QIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130
Query: 371 NTLINGLIGVGRVEDASRLFECM 303
N LI GL +G+++ A + + M
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMM 153
Score = 58.9 bits (141), Expect = 2e-06
Identities = 34/95 (35%), Positives = 52/95 (54%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL G+V EA ++++ M + P Y ++ GLC ++A K+L M R
Sbjct: 477 MLEGLCSTGKVEEAQEVMDLM-TKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSER 535
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
GC P+L +Y+ LINGL RVEDA + + M K
Sbjct: 536 GCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEK 570
>ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein
SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 89.0 bits (219), Expect = 2e-15
Identities = 45/98 (45%), Positives = 60/98 (61%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL K GR+ AL L + M P V+TY+ L+DGLCR EV+ CKLL EM R
Sbjct: 71 MIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGR 130
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTP 285
GC P+ ++YNTL+N L+G GR ++A L E M P
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCP 168
Score = 86.7 bits (213), Expect = 8e-15
Identities = 41/92 (44%), Positives = 61/92 (66%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V GL K GRV EAL +M DE ++P VI Y+ L+DGLC+AG++++A + L M+R
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G PD+++++ LINGL GR++ LF M
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGM 480
Score = 75.5 bits (184), Expect = 2e-11
Identities = 38/92 (41%), Positives = 60/92 (65%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL K +V +A+ L QM D+ I PDV+TY L+DGL + V++A L E +
Sbjct: 1 MIDGLCKSRKVDKAITLFKQM-VDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 59
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC+P +++YNT+I+GL GR+E+A L++ M
Sbjct: 60 GCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 91
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/93 (38%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEF-ISPDVITYNCLLDGLCRAGEVEDACKLLLEMVR 402
++ GL KEG + A ++V++M E +SPDVIT+N +LDGLC+ + DA + +
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236
Query: 401 RGCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
RGC P++++Y+TLI+GL + ++++A +L M
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269
Score = 71.6 bits (174), Expect = 3e-10
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G K R+ EA+ L+ +M F P V+TY L GLCR+G ++A ++L M R
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGF-HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 377
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK--LTPHSIPLQRLL 258
GC P+ I+Y+++++GL GRV +A FE M + PH I L+
Sbjct: 378 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 426
Score = 66.6 bits (161), Expect = 8e-09
Identities = 33/93 (35%), Positives = 61/93 (65%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL KE R+ +A + + + P+V+TY+ L+DGL + ++++A +LL +MV
Sbjct: 214 VLDGLCKEQRILDAHNVFKRA-LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
GC + ++Y+T+++GL+ VGR+EDA + MR
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Score = 65.5 bits (158), Expect = 2e-08
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+V GL K GR+ +A+ ++ QM D PD +TYN L+DG + + +A LL EM+
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMR-DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 342
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEIVQEKR 234
G +P +++Y TL +GL GR ++A + + M + P++I ++ + + R
Sbjct: 343 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398
Score = 65.1 bits (157), Expect = 2e-08
Identities = 36/88 (40%), Positives = 53/88 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++GL GR+ L+L M A+ PD++TY L+D LCRA V++A L +M
Sbjct: 460 LINGLCDAGRIDTGLELFRGM-AERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSD 518
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRL 315
G +PD + T+I+GL+ V R EDA R+
Sbjct: 519 GLSPDRSTRRTMIHGLLEVNRDEDAKRI 546
Score = 63.5 bits (153), Expect = 7e-08
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL ++ V + KL+ +M A +P+ +TYN L++ L G ++A LL +M
Sbjct: 107 LIDGLCRDHEVDKGCKLLEEM-AGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAAN 165
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM---RGKLTPHSIPLQRLLTEIVQEKR 234
GC P+LI++ +I GL G +E A R+ + M L+P I +L + +E+R
Sbjct: 166 GCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQR 223
Score = 62.4 bits (150), Expect = 2e-07
Identities = 34/92 (36%), Positives = 55/92 (59%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K ++ EAL+L+ +M + + +TY+ ++DGL + G +EDA +L +M
Sbjct: 249 LIDGLSKMAKMDEALQLLAKM-VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 307
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC PD ++YNTLI+G R+ +A L M
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339
>ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Solanum lycopersicum]
gi|723688964|ref|XP_010319201.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Solanum lycopersicum]
gi|723688967|ref|XP_010319202.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Solanum lycopersicum]
gi|723688971|ref|XP_010319203.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Solanum lycopersicum]
Length = 1131
Score = 88.6 bits (218), Expect = 2e-15
Identities = 54/131 (41%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GLGKEG++ EA +L++ M A +P+ ITYN LLD LC+ GEV+ A LL +M
Sbjct: 602 LLAGLGKEGKIREAYELLDCM-ALHGCAPNTITYNTLLDSLCKNGEVDTALTLLYQMTGP 660
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHSIPLQRLLTEIVQE---KRCV 228
C PD+ SYNT+I GL RV +A LF M+ K+ P + + LL +V++ + V
Sbjct: 661 NCFPDVFSYNTVIFGLAKEKRVTEAFLLFHQMKKKMYPDCVTVYALLPILVKDGLVEDAV 720
Query: 227 *FISMVINQRL 195
+ +NQ L
Sbjct: 721 KIVDGFVNQAL 731
Score = 73.2 bits (178), Expect = 9e-11
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++G GK G + A L N+M E I PD+ TY L+D LC A +V+DA E+
Sbjct: 954 LINGFGKAGDLKAACDLFNRMNK-EGIRPDLKTYTILVDCLCSARKVDDALHYFEELKSA 1012
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPH 282
G +PDLISYN +INGL G++++A L + M+ + +TP+
Sbjct: 1013 GLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRGITPN 1052
Score = 70.1 bits (170), Expect = 8e-10
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = -2
Query: 575 VHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRG 396
++ + + GR+GEA ++ + + ++ P+ ITYN ++ AG+V++A KLL EM+ G
Sbjct: 498 LYSVAEMGRLGEAKRIFDGIRESGYV-PNSITYNMMMKCYSNAGKVDEAIKLLSEMIESG 556
Query: 395 CNPDLISYNTLINGLIGVGRVEDASRLFECMRG-KLTPHSIPLQRLLTEIVQE 240
C+PD+I N+LI+ L GR +A LF ++ KLTP + LL + +E
Sbjct: 557 CDPDVIVVNSLIDILYKDGRASEAWALFYRLKDMKLTPTVVTYNTLLAGLGKE 609
Score = 65.5 bits (158), Expect = 2e-08
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L K+GR EA L +++ D ++P V+TYN LL GL + G++ +A +LL M
Sbjct: 567 LIDILYKDGRASEAWALFYRLK-DMKLTPTVVTYNTLLAGLGKEGKIREAYELLDCMALH 625
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRG-KLTPHSIPLQRLLTEIVQEKR 234
GC P+ I+YNTL++ L G V+ A L M G P ++ + +EKR
Sbjct: 626 GCAPNTITYNTLLDSLCKNGEVDTALTLLYQMTGPNCFPDVFSYNTVIFGLAKEKR 681
Score = 63.5 bits (153), Expect = 7e-08
Identities = 35/90 (38%), Positives = 59/90 (65%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV L +V +AL ++++ + PD+I+YN +++GL ++G++++A LL EM R
Sbjct: 989 LVDCLCSARKVDDALHYFEELKSAG-LDPDLISYNLMINGLGKSGKMKEALHLLDEMKSR 1047
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFE 309
G P+L +YNTLI L VG +E+A R++E
Sbjct: 1048 GITPNLYTYNTLIFNLGIVGMLEEAGRMYE 1077
Score = 63.5 bits (153), Expect = 7e-08
Identities = 36/101 (35%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+++GLGK G++ EAL L+++M++ I+P++ TYN L+ L G +E+A ++ E+ +
Sbjct: 1024 MINGLGKSGKMKEALHLLDEMKS-RGITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQL 1082
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFE-CMRGKLTPHS 279
G PD+ +YN LI G G + A ++E M G +P+S
Sbjct: 1083 GLEPDVFTYNALIRGYSKSGDPDGAYAIYEKMMVGGCSPNS 1123
Score = 62.4 bits (150), Expect = 2e-07
Identities = 35/85 (41%), Positives = 49/85 (57%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV GL A L +M+ +PDV TYN LD L ++G+V++ +L EM+ R
Sbjct: 813 LVEGLLNVNLKELAWHLFKEMKNSACCAPDVYTYNLFLDELGKSGKVDELFELYEEMLHR 872
Query: 398 GCNPDLISYNTLINGLIGVGRVEDA 324
GC P I+YN LI+GL+ +VE A
Sbjct: 873 GCKPVAITYNILISGLVKSNKVERA 897
Score = 60.5 bits (145), Expect = 6e-07
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L G + +++MEAD + DV+++ L+D LC+ G+V +A L M +
Sbjct: 357 LLDRLSDRGDLDSVRDFLDRMEADGY-KADVVSFTILVDALCKVGKVSEAFSTLDVMKEK 415
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G P+L +YN+LI GL+ RV +A LF+ M
Sbjct: 416 GILPNLHTYNSLIRGLLRKKRVNEALELFDSM 447
Score = 57.4 bits (137), Expect = 5e-06
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = -2
Query: 554 GRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLIS 375
G+V EA+KL+++M + PDVI N L+D L + G +A L + P +++
Sbjct: 540 GKVDEAIKLLSEM-IESGCDPDVIVVNSLIDILYKDGRASEAWALFYRLKDMKLTPTVVT 598
Query: 374 YNTLINGLIGVGRVEDASRLFECMR-GKLTPHSIPLQRLLTEI 249
YNTL+ GL G++ +A L +CM P++I LL +
Sbjct: 599 YNTLLAGLGKEGKIREAYELLDCMALHGCAPNTITYNTLLDSL 641
>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|731386116|ref|XP_010648751.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|731386118|ref|XP_010648752.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|731386120|ref|XP_010648753.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|731386122|ref|XP_010648754.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|731386124|ref|XP_010648755.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product
[Vitis vinifera]
Length = 1113
Score = 88.6 bits (218), Expect = 2e-15
Identities = 51/115 (44%), Positives = 70/115 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GLGKEGRV EA L M AD+ P+ I++N LLD LC+ GEV+ A K+L M
Sbjct: 583 LLAGLGKEGRVQEATALFKGMIADD-CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEM 641
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHSIPLQRLLTEIVQEKR 234
C PD+++YNT+I GLI RV A LF M+ + P + L LL ++++ R
Sbjct: 642 NCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGR 696
Score = 73.6 bits (179), Expect = 7e-11
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++G GK+G V A +L +M E I PD+ +Y+ ++D LC G+V+DA E+
Sbjct: 934 LMNGFGKQGDVETACELFRRM-VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTP 285
G +PDL+ YN +INGL RVE+A LF+ MR + +TP
Sbjct: 993 GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITP 1031
Score = 73.2 bits (178), Expect = 9e-11
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Frame = -2
Query: 575 VHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRG 396
++ L ++GR+ EA + N ++ ++PD ITYN L+ +AG V+DA KLL EM G
Sbjct: 479 LYSLAEQGRLEEAKEFFNGLKKCG-LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG 537
Query: 395 CNPDLISYNTLINGLIGVGRVEDASRLFECMRG-KLTPHSIPLQRLLTEIVQEKR 234
C+P+++ N+LI+ L RV++A ++F+ M+ KL P + LL + +E R
Sbjct: 538 CDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGR 592
Score = 67.4 bits (163), Expect = 5e-09
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GK GRV +A+KL+++ME + P+V+ N L+D L +A V++A K+ M
Sbjct: 513 LMRCYGKAGRVDDAIKLLSEME-ENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEM 571
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM-RGKLTPHSIPLQRLL 258
P +++YNTL+ GL GRV++A+ LF+ M P++I LL
Sbjct: 572 KLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLL 619
Score = 67.0 bits (162), Expect = 6e-09
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K GR+ EA + +M D P+ YN L++G + G+VE AC+L MV+
Sbjct: 899 LIDGLLKLGRLEEAKQFFEEM-LDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKE 957
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFE 309
G PDL SY+ +++ L VG+V+DA FE
Sbjct: 958 GIRPDLKSYSIMVDCLCMVGKVDDALHYFE 987
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/74 (43%), Positives = 52/74 (70%)
Frame = -2
Query: 524 NQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTLINGLIG 345
++MEAD ++ PDV+T+ L+D LC+ G+V++A L M ++G P+L +YNTLI GL+
Sbjct: 356 SEMEADGYL-PDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR 414
Query: 344 VGRVEDASRLFECM 303
+ R+++A LF M
Sbjct: 415 LNRLDEALELFNSM 428
Score = 61.6 bits (148), Expect = 3e-07
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = -2
Query: 554 GRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLIS 375
G+V +AL +++ + PD++ YN +++GL R+ VE+A L EM RG PDL +
Sbjct: 977 GKVDDALHYFEELKLSG-LDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYT 1035
Query: 374 YNTLINGLIGVGRVEDASRLFE 309
YN LI L G VE+A +++E
Sbjct: 1036 YNALILNLGIAGMVEEAGKMYE 1057
Score = 61.2 bits (147), Expect = 4e-07
Identities = 35/92 (38%), Positives = 56/92 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+++GLG+ RV EAL L ++M + I+PD+ TYN L+ L AG VE+A K+ E+ +
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMR-NRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G P++ +YN LI G G + A +++ M
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094
Score = 57.0 bits (136), Expect = 7e-06
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = -2
Query: 566 LGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNP 387
LG+ G++ EA ++ +M+ D PDV+TY L+D LC AG++ +A +L L+M P
Sbjct: 272 LGRAGKIDEAYGILKRMD-DAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKP 330
Query: 386 DLISYNTLIN 357
D ++Y TL++
Sbjct: 331 DRVTYITLLD 340
Score = 57.0 bits (136), Expect = 7e-06
Identities = 34/92 (36%), Positives = 50/92 (54%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL K + +A+ L + + +F SP TY L+DGL + G +E+A + EM+
Sbjct: 864 VIFGLVKSNSLDKAIDLYYDLMSGDF-SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDY 922
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC P+ YN L+NG G VE A LF M
Sbjct: 923 GCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
>ref|XP_004952738.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Setaria italica]
Length = 722
Score = 88.2 bits (217), Expect = 3e-15
Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ L ++G V A+K+V QM +I PD+ITYNC++DGLC ++DA ++L +
Sbjct: 412 IIASLCQKGLVNRAIKVVEQMLEHRYI-PDIITYNCIIDGLCNIKCIDDAMEMLRNLQSC 470
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
GC PDL++YNT++ GL V R EDA +L M +P + ++T + Q+
Sbjct: 471 GCKPDLVTYNTVLKGLCSVDRWEDAEQLMVNMMHSNCSPDEMTFNTVITSLCQK 524
Score = 72.4 bits (176), Expect = 2e-10
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ L ++G V A+K+V+ M I PD+ITY+ +LDGL G V+DA +LL +
Sbjct: 307 VITSLCQKGLVDRAIKVVDHMSEHGCI-PDIITYSSILDGLSNGGRVDDAVELLSRLRSY 365
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
GC PD I+Y T++ GL R E A L E +R P + ++ + Q+
Sbjct: 366 GCKPDSIAYTTVLKGLCSAERWEHAEELLAEMVRSGCPPDEVTFNTIIASLCQK 419
Score = 65.1 bits (157), Expect = 2e-08
Identities = 37/92 (40%), Positives = 55/92 (59%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
++ GL GRV +A++L++++ + PD I Y +L GLC A E A +LL EMVR
Sbjct: 342 ILDGLSNGGRVDDAVELLSRLRSYG-CKPDSIAYTTVLKGLCSAERWEHAEELLAEMVRS 400
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC PD +++NT+I L G V A ++ E M
Sbjct: 401 GCPPDEVTFNTIIASLCQKGLVNRAIKVVEQM 432
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTL 363
+A+ L+++M A + PD++TYN L++ +C G+ ++A +L + RGC PD ++Y +
Sbjct: 214 QAMVLLDEMRA-KGCEPDIVTYNVLINAMCNEGDADEALSVLRSLPSRGCKPDAVTYTPV 272
Query: 362 INGLIGVGRVEDASRLF-ECMRGKLTPHSIPLQRLLTEIVQE 240
+ L R ++A L E K P + ++T + Q+
Sbjct: 273 LKSLCSSERWKEAEELLAEMASNKCAPDEVTFNTVITSLCQK 314
Score = 62.8 bits (151), Expect = 1e-07
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = -2
Query: 542 EALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTL 363
EA +L+ +M +++ +PD +T+N ++ LC+ G V+ A K++ M GC PD+I+Y+++
Sbjct: 284 EAEELLAEMASNK-CAPDEVTFNTVITSLCQKGLVDRAIKVVDHMSEHGCIPDIITYSSI 342
Query: 362 INGLIGVGRVEDASRLFECMRG-KLTPHSIPLQRLLTEIVQEKR 234
++GL GRV+DA L +R P SI +L + +R
Sbjct: 343 LDGLSNGGRVDDAVELLSRLRSYGCKPDSIAYTTVLKGLCSAER 386
Score = 62.4 bits (150), Expect = 2e-07
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L GR+ +AL + + SP V+TY+ LLD C+A A LL EM +
Sbjct: 167 LIRALCVRGRIPDALAVFDDT-LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK 225
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLTEIVQEKR 234
GC PD+++YN LIN + G ++A + + + P ++ +L + +R
Sbjct: 226 GCEPDIVTYNVLINAMCNEGDADEALSVLRSLPSRGCKPDAVTYTPVLKSLCSSER 281
>ref|XP_011081976.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Sesamum indicum]
Length = 1113
Score = 87.8 bits (216), Expect = 4e-15
Identities = 51/112 (45%), Positives = 68/112 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GLGKEG+V E+ KL M A P+ IT+N LLD LC+ EV+ A K+L M +R
Sbjct: 585 LLAGLGKEGKVQESYKLFESMAAYG-CPPNTITFNTLLDCLCKNDEVDLALKMLYAMTKR 643
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHSIPLQRLLTEIVQ 243
C PDL +YNT+I GL+ R+ +A LF MR L P + L LL +V+
Sbjct: 644 DCFPDLFTYNTVIYGLVKDARITEAFWLFHQMRKILYPDCVTLYTLLPGVVK 695
Score = 72.8 bits (177), Expect = 1e-10
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++G GK G V A +L N+M +E I PD+ +Y+ L+D C G V+DA E+
Sbjct: 936 LINGFGKSGDVETARELFNRM-VEEGIRPDLKSYSILVDCFCLLGRVDDAMHYFEEIKAA 994
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTP 285
G +PDLI Y+ +INGL G+V DA L + MR + +TP
Sbjct: 995 GLDPDLICYSIIINGLGKAGKVTDALTLLDEMRSRGMTP 1033
Score = 61.2 bits (147), Expect = 4e-07
Identities = 33/82 (40%), Positives = 53/82 (64%)
Frame = -2
Query: 554 GRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLIS 375
GRV +A+ +++A + PD+I Y+ +++GL +AG+V DA LL EM RG PDL +
Sbjct: 979 GRVDDAMHYFEEIKAAG-LDPDLICYSIIINGLGKAGKVTDALTLLDEMRSRGMTPDLYT 1037
Query: 374 YNTLINGLIGVGRVEDASRLFE 309
+N+LI L G VE+A +++
Sbjct: 1038 FNSLIFNLGIAGMVEEAGNMYK 1059
Score = 59.7 bits (143), Expect = 1e-06
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = -2
Query: 575 VHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRG 396
++ L + GR+ EA + ++ + PD ITYN ++ G+V++A +LL EM+ G
Sbjct: 481 LYSLAEVGRLREAKNIFYGIKQSGLV-PDSITYNMMMKCYSNEGKVDEAIQLLTEMIDHG 539
Query: 395 CNPDLISYNTLINGLIGVGRVEDASRLFECMRG-KLTPHSIPLQRLLTEIVQE 240
C+PD+I N+LI+ L R +A +F M+ KL P + LL + +E
Sbjct: 540 CHPDVIVLNSLIDTLYKADRSNEAWEMFCKMKVLKLVPTVVTYNTLLAGLGKE 592
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = -2
Query: 491 DVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTLINGLIGVGRVEDASRL- 315
DV TYN LLD L ++G+V + L EM+ RGC PD I+ N LI+GL+ R+E A L
Sbjct: 824 DVSTYNLLLDDLAKSGKVNELFDLYNEMLHRGCQPDTITRNILISGLVKSNRLEKAIDLY 883
Query: 314 FECMRGKLTPHSIPLQRLLTEIVQEKR 234
++ + G P L+ +++ KR
Sbjct: 884 YDLISGGFFPTPCTYGPLIDGLLKLKR 910
Score = 58.9 bits (141), Expect = 2e-06
Identities = 35/90 (38%), Positives = 51/90 (56%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K R+ EA L +M + P+ YN L++G ++G+VE A +L MV
Sbjct: 901 LIDGLLKLKRLDEAKTLFEEM-IEYGCKPNCAIYNILINGFGKSGDVETARELFNRMVEE 959
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFE 309
G PDL SY+ L++ +GRV+DA FE
Sbjct: 960 GIRPDLKSYSILVDCFCLLGRVDDAMHYFE 989
Score = 58.9 bits (141), Expect = 2e-06
Identities = 33/92 (35%), Positives = 56/92 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
+++GLGK G+V +AL L+++M + ++PD+ T+N L+ L AG VE+A + E+
Sbjct: 1006 IINGLGKAGKVTDALTLLDEMRS-RGMTPDLYTFNSLIFNLGIAGMVEEAGNMYKELQLV 1064
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G PD+ +YN LI G+ + A ++E M
Sbjct: 1065 GLKPDVFTYNALIRAYSISGKPDHAYGVYEEM 1096
Score = 58.5 bits (140), Expect = 2e-06
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = -2
Query: 557 EGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLI 378
EG+V EA++L+ +M D PDVI N L+D L +A +A ++ +M P ++
Sbjct: 522 EGKVDEAIQLLTEM-IDHGCHPDVIVLNSLIDTLYKADRSNEAWEMFCKMKVLKLVPTVV 580
Query: 377 SYNTLINGLIGVGRVEDASRLFECMRG-KLTPHSIPLQRLL 258
+YNTL+ GL G+V+++ +LFE M P++I LL
Sbjct: 581 TYNTLLAGLGKEGKVQESYKLFESMAAYGCPPNTITFNTLL 621
Score = 58.2 bits (139), Expect = 3e-06
Identities = 35/92 (38%), Positives = 48/92 (52%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K R+ +A+ L + + F P TY L+DGL + +++A L EM+
Sbjct: 866 LISGLVKSNRLEKAIDLYYDLISGGFF-PTPCTYGPLIDGLLKLKRLDEAKTLFEEMIEY 924
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC P+ YN LING G VE A LF M
Sbjct: 925 GCKPNCAIYNILINGFGKSGDVETARELFNRM 956
Score = 57.8 bits (138), Expect = 4e-06
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L K G+V E L N+M PD IT N L+ GL ++ +E A L +++
Sbjct: 831 LLDDLAKSGKVNELFDLYNEM-LHRGCQPDTITRNILISGLVKSNRLEKAIDLYYDLISG 889
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G P +Y LI+GL+ + R+++A LFE M
Sbjct: 890 GFFPTPCTYGPLIDGLLKLKRLDEAKTLFEEM 921
Score = 57.0 bits (136), Expect = 7e-06
Identities = 32/72 (44%), Positives = 46/72 (63%)
Frame = -2
Query: 518 MEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRRGCNPDLISYNTLINGLIGVG 339
MEAD + DV+T+ L+D LC+ G+V DA +L EM G P+L +YNTLI GL+ +
Sbjct: 360 MEADGY-KADVVTFTILVDALCKVGKVNDAFMVLGEMKEVGILPNLHTYNTLICGLLRLR 418
Query: 338 RVEDASRLFECM 303
R+ +A L + M
Sbjct: 419 RLGEALELCDNM 430
>ref|XP_011092997.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Sesamum indicum]
Length = 742
Score = 87.8 bits (216), Expect = 4e-15
Identities = 43/95 (45%), Positives = 57/95 (60%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K GR E LKL+ +M D P+ ITYNCL+DG C+AGE+E +L +M
Sbjct: 363 LIDGLCKVGRQEEGLKLIERMRFDSKCEPNTITYNCLIDGFCKAGEIEKGRELFEQMSNE 422
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
G ++I+ N L+NG+ GRV A F MRGK
Sbjct: 423 GVKSNVITLNVLLNGMCKHGRVSSAMEFFGSMRGK 457
Score = 62.0 bits (149), Expect = 2e-07
Identities = 31/93 (33%), Positives = 53/93 (56%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L++G+ K GRV A++ M + + + +TY L+ C A ++ A KL EM +
Sbjct: 434 LLNGMCKHGRVSSAMEFFGSMRG-KGVKGNGVTYTILISAFCNANNIDKAMKLFDEMQKN 492
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMR 300
GC+ D + Y +LI+GL GR++DA+ + M+
Sbjct: 493 GCSRDAVVYYSLISGLNQAGRMDDATFIVSKMK 525
Score = 61.2 bits (147), Expect = 4e-07
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMV-- 405
L+ GLG+ L+ +M+ ++ I PDV+TY ++ LC +++A ++L +M
Sbjct: 291 LLTGLGQHRDFARINLLMKEMK-EKGIKPDVVTYGIMIKNLCNFRRLDEALEVLEKMRDG 349
Query: 404 RRGCNPDLISYNTLINGLIGVGRVEDASRLFECMR--GKLTPHSIPLQRLL 258
G PD+ YNTLI+GL VGR E+ +L E MR K P++I L+
Sbjct: 350 ELGVEPDVFIYNTLIDGLCKVGRQEEGLKLIERMRFDSKCEPNTITYNCLI 400
Score = 60.8 bits (146), Expect = 5e-07
Identities = 30/92 (32%), Positives = 54/92 (58%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL + GR+ +A +V++M+ F D++ YN L+ G CR +++ A ++L +M +
Sbjct: 504 LISGLNQAGRMDDATFIVSKMKEAGF-GLDIVCYNMLISGFCRKNKLDKAYEMLKDMEKA 562
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G PD ++YNTL++ G A R+ + M
Sbjct: 563 GMKPDRVTYNTLLSYFCRSGNFTQAHRVMKKM 594
>ref|XP_010273577.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g53700, chloroplastic-like [Nelumbo nucifera]
Length = 773
Score = 87.8 bits (216), Expect = 4e-15
Identities = 48/117 (41%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LVHG KEG+V EAL L+ +M + F PD T+N L++GLC+AG V+ A ++L M++
Sbjct: 288 LVHGFCKEGKVEEALNLIQEMSLEGFC-PDKFTFNTLVNGLCKAGHVKHALEILDVMLQE 346
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM--RGKLTPHSIPLQRLLTEIVQEKR 234
G +PD+ +YNTL +GL G +EDA + M RG P+++ L++ + +E R
Sbjct: 347 GFDPDIFTYNTLXSGLCKSGEIEDAIDVLNLMVCRG-CFPNTVTYNTLISTMCKENR 402
Score = 81.6 bits (200), Expect = 3e-13
Identities = 46/102 (45%), Positives = 65/102 (63%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
LV+GL K G V AL++++ M + F PD+ TYN L GLC++GE+EDA +L MV R
Sbjct: 323 LVNGLCKAGHVKHALEILDVMLQEGF-DPDIFTYNTLXSGLCKSGEIEDAIDVLNLMVCR 381
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGKLTPHSIP 273
GC P+ ++YNTLI+ + RVE+A+ E RG T +P
Sbjct: 382 GCFPNTVTYNTLISTMCKENRVEEAT---ELARGLSTKGLLP 420
Score = 81.6 bits (200), Expect = 3e-13
Identities = 44/95 (46%), Positives = 58/95 (61%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ GL K RV EA +L++QM E + PD TYN LL CRAG+++ A ++ M
Sbjct: 533 LIDGLCKNKRVDEAAQLMDQMLM-EGLKPDKFTYNSLLTHFCRAGDIKKAADIVQTMTSN 591
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
GC PD ++Y TLI GL GRVE ASRL ++ K
Sbjct: 592 GCEPDAVTYGTLIGGLCKAGRVELASRLLRTVQMK 626
Score = 72.4 bits (176), Expect = 2e-10
Identities = 38/92 (41%), Positives = 57/92 (61%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+HGL G G A++L +M+ + PD TYN L+D LC G +E+A LL EM +
Sbjct: 428 LMHGLCISGDHGIAMELFEEMK-NHGCPPDEFTYNVLIDSLCSKGRLEEALGLLKEMESK 486
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
GC ++++YNTLI+G R+E+A +F+ M
Sbjct: 487 GCARNVVTYNTLIDGFCKNQRIEEAEEVFDQM 518
Score = 67.4 bits (163), Expect = 5e-09
Identities = 39/109 (35%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ L +GR+ EAL L+ +ME+ + + +V+TYN L+DG C+ +E+A ++ +M +
Sbjct: 463 LIDSLCSKGRLEEALGLLKEMES-KGCARNVVTYNTLIDGFCKNQRIEEAEEVFDQMELQ 521
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK-LTPHSIPLQRLLT 255
G + ++++YNTLI+GL RV++A++L + M + L P LLT
Sbjct: 522 GVSRNMVTYNTLIDGLCKNKRVDEAAQLMDQMLMEGLKPDKFTYNSLLT 570
Score = 66.6 bits (161), Expect = 8e-09
Identities = 38/95 (40%), Positives = 53/95 (55%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ + KE RV EA +L + + PDV T+N L+ GLC +G+ A +L EM
Sbjct: 393 LISTMCKENRVEEATELARGLSTKGLL-PDVCTFNSLMHGLCISGDHGIAMELFEEMKNH 451
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECMRGK 294
GC PD +YN LI+ L GR+E+A L + M K
Sbjct: 452 GCPPDEFTYNVLIDSLCSKGRLEEALGLLKEMESK 486
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/92 (34%), Positives = 52/92 (56%)
Frame = -2
Query: 578 LVHGLGKEGRVGEALKLVNQMEADEFISPDVITYNCLLDGLCRAGEVEDACKLLLEMVRR 399
L+ G +EG + AL++ +M + + +T N L+ G C+ G+VE+A L+ EM
Sbjct: 253 LMQGFIEEGNMEGALRMKEKM-METGCTMSNVTVNVLVHGFCKEGKVEEALNLIQEMSLE 311
Query: 398 GCNPDLISYNTLINGLIGVGRVEDASRLFECM 303
G PD ++NTL+NGL G V+ A + + M
Sbjct: 312 GFCPDKFTFNTLVNGLCKAGHVKHALEILDVM 343