BLASTX nr result

ID: Cinnamomum24_contig00021692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00021692
         (336 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011035802.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_002324074.2| pentatricopeptide repeat-containing family p...    57   5e-06

>ref|XP_011035802.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial [Populus euphratica]
          Length = 636

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -2

Query: 335 IIRDRNRFHCFKHGSCSCSDYW 270
           +IRDRNRFHCFKHGSCSCSDYW
Sbjct: 615 VIRDRNRFHCFKHGSCSCSDYW 636


>ref|XP_002324074.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550320120|gb|EEF04207.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 636

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -2

Query: 335 IIRDRNRFHCFKHGSCSCSDYW 270
           +IRDRNRFHCFKHGSCSCSDYW
Sbjct: 615 VIRDRNRFHCFKHGSCSCSDYW 636


Top