BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00021649
         (587 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009171970.1| RNA polymerase beta (chloroplast) [Machilus ...   391   e-106
gb|AEX94488.1| RNA polymerase beta (chloroplast) [Ledebouria cor...   382   e-104
gb|AEX94508.1| RNA polymerase beta (chloroplast) [Xanthorrhoea p...   380   e-103
gb|AEX94491.1| RNA polymerase beta (chloroplast) [Iris tenax]         379   e-103
gb|AKZ23892.1| RNA polymerase beta subunit (plastid) [Verbena ha...   379   e-103
ref|YP_009059510.1| RNA polymerase beta subunit [Iris gatesii] g...   379   e-103
ref|YP_009045557.1| RNA polymerase beta subunit (chloroplast) [C...   379   e-103
gb|AAZ03990.1| RNA polymerase beta' chain [Yucca schidigera]          379   e-103
gb|AHH24324.1| RNA polymerase beta (chloroplast) [Japonolirion o...   379   e-103
gb|AEX94501.1| RNA polymerase beta (chloroplast) [Maianthemum st...   379   e-103
gb|AEX94497.1| RNA polymerase beta (chloroplast) [Liriope spicata]    379   e-103
gb|AEX94495.1| RNA polymerase beta (chloroplast) [Dasylirion whe...   379   e-103
gb|AEX94494.1| RNA polymerase beta (chloroplast) [Beaucarnea hoo...   379   e-103
gb|AEX94478.1| RNA polymerase beta (chloroplast) [Asparagus aspa...   379   e-103
gb|AEX94477.1| RNA polymerase beta (chloroplast) [Asparagus offi...   379   e-103
gb|AEX94467.1| RNA polymerase beta (chloroplast) [Polianthes sp....   379   e-103
gb|AEX94466.1| RNA polymerase beta (chloroplast) [Manfreda virgi...   379   e-103
gb|AEX94465.1| RNA polymerase beta (chloroplast) [Hosta ventricosa]   379   e-103
gb|AEX94464.1| RNA polymerase beta (chloroplast) [Echeandia sp. ...   379   e-103
gb|AEX94463.1| RNA polymerase beta (chloroplast) [Camassia scill...   379   e-103

>ref|YP_009171970.1| RNA polymerase beta (chloroplast) [Machilus yunnanensis]
           gi|938340030|ref|YP_009172051.1| RNA polymerase beta
           (chloroplast) [Machilus balansae]
           gi|913021825|gb|AKU70965.1| RNA polymerase beta
           (chloroplast) [Cinnamomum micranthum f. kanehirae]
           gi|929982313|gb|ALF35675.1| RNA polymerase beta
           (chloroplast) [Machilus yunnanensis]
           gi|929982395|gb|ALF35756.1| RNA polymerase beta
           (chloroplast) [Machilus balansae]
          Length = 683

 Score =  391 bits (1004), Expect = e-106
 Identities = 194/195 (99%), Positives = 194/195 (99%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG
Sbjct: 365 GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 424

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLV K
Sbjct: 425 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVRK 484

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 485 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 544

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNPWN
Sbjct: 545 GNRRGICANRYNPWN 559


>gb|AEX94488.1| RNA polymerase beta (chloroplast) [Ledebouria cordifolia]
          Length = 685

 Score =  382 bits (980), Expect = e-104
 Identities = 189/195 (96%), Positives = 193/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GGRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVGGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94508.1| RNA polymerase beta (chloroplast) [Xanthorrhoea preissii]
          Length = 685

 Score =  380 bits (976), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILAEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPA+GDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAMGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94491.1| RNA polymerase beta (chloroplast) [Iris tenax]
          Length = 685

 Score =  379 bits (973), Expect = e-103
 Identities = 187/195 (95%), Positives = 193/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GGRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVGGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPA+GDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAMGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNR+GICANRYNP+N
Sbjct: 548 GNRQGICANRYNPYN 562


>gb|AKZ23892.1| RNA polymerase beta subunit (plastid) [Verbena hastata]
          Length = 691

 Score =  379 bits (972), Expect = e-103
 Identities = 185/195 (94%), Positives = 190/195 (97%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIR+H+ASNIG
Sbjct: 376 GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIG 435

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           +AKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLH+LGIQAFQP+L  GRAICLHPLVCK
Sbjct: 436 VAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHKLGIQAFQPVLVEGRAICLHPLVCK 495

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLT 
Sbjct: 496 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTS 555

Query: 541 GNRRGICANRYNPWN 585
           GNRRGIC NRYNPWN
Sbjct: 556 GNRRGICVNRYNPWN 570


>ref|YP_009059510.1| RNA polymerase beta subunit [Iris gatesii]
           gi|685161355|gb|AIN78999.1| RNA polymerase beta subunit
           [Iris gatesii]
          Length = 684

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 365 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 424

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 425 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 484

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 485 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 544

Query: 541 GNRRGICANRYNPWN 585
           GNR+GICANRYNP+N
Sbjct: 545 GNRQGICANRYNPYN 559


>ref|YP_009045557.1| RNA polymerase beta subunit (chloroplast) [Cypripedium macranthos]
           gi|578888857|gb|AHI16740.1| RNA polymerase beta subunit
           (chloroplast) (chloroplast) [Cypripedium macranthos]
          Length = 682

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 365 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 424

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 425 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 484

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 485 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 544

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 545 GNRRGICANRYNPYN 559


>gb|AAZ03990.1| RNA polymerase beta' chain [Yucca schidigera]
          Length = 693

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 379 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 438

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 439 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 498

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 499 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 558

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 559 GNRRGICANRYNPYN 573


>gb|AHH24324.1| RNA polymerase beta (chloroplast) [Japonolirion osense]
          Length = 682

 Score =  379 bits (972), Expect = e-103
 Identities = 187/195 (95%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+H+ASNIG
Sbjct: 365 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRKHVASNIG 424

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 425 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 484

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 485 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 544

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 545 GNRRGICANRYNPYN 559


>gb|AEX94501.1| RNA polymerase beta (chloroplast) [Maianthemum stellatum]
          Length = 689

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94497.1| RNA polymerase beta (chloroplast) [Liriope spicata]
          Length = 685

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94495.1| RNA polymerase beta (chloroplast) [Dasylirion wheeleri]
          Length = 685

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94494.1| RNA polymerase beta (chloroplast) [Beaucarnea hookeri]
          Length = 685

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94478.1| RNA polymerase beta (chloroplast) [Asparagus asparagoides]
          Length = 689

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 370 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 429

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 430 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 489

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 490 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 549

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 550 GNRRGICANRYNPYN 564


>gb|AEX94477.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
          Length = 689

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 370 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 429

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 430 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 489

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 490 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 549

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 550 GNRRGICANRYNPYN 564


>gb|AEX94467.1| RNA polymerase beta (chloroplast) [Polianthes sp. Pires 2011-05]
          Length = 683

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94466.1| RNA polymerase beta (chloroplast) [Manfreda virginica]
          Length = 683

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94465.1| RNA polymerase beta (chloroplast) [Hosta ventricosa]
          Length = 685

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94464.1| RNA polymerase beta (chloroplast) [Echeandia sp. Steele 1101]
          Length = 683

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562


>gb|AEX94463.1| RNA polymerase beta (chloroplast) [Camassia scilloides]
          Length = 685

 Score =  379 bits (972), Expect = e-103
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +1

Query: 1   GRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRRHIASNIG 180
           GRFRETLLGKRVDYSGRSVIVVGPSLSLH+CGLPREIAIELFQTFVIRGLIR+HIASNIG
Sbjct: 368 GRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIG 427

Query: 181 IAKSQIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCK 360
           IAKS+IREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL  GRAICLHPLVCK
Sbjct: 428 IAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCK 487

Query: 361 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTI 540
           GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTI
Sbjct: 488 GFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTI 547

Query: 541 GNRRGICANRYNPWN 585
           GNRRGICANRYNP+N
Sbjct: 548 GNRRGICANRYNPYN 562