BLASTX nr result
ID: Cinnamomum24_contig00021577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00021577
(425 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323645.2| pentatricopeptide repeat-containing family p... 45 1e-06
ref|XP_011032581.1| PREDICTED: putative pentatricopeptide repeat... 46 2e-06
ref|XP_011019049.1| PREDICTED: putative pentatricopeptide repeat... 45 2e-06
ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selag... 47 2e-06
ref|XP_002309169.1| pentatricopeptide repeat-containing family p... 45 3e-06
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 46 3e-06
ref|XP_011623588.1| PREDICTED: pentatricopeptide repeat-containi... 47 3e-06
emb|CBI18084.3| unnamed protein product [Vitis vinifera] 46 3e-06
ref|XP_008244805.1| PREDICTED: putative pentatricopeptide repeat... 44 4e-06
ref|XP_007207055.1| hypothetical protein PRUPE_ppb002198mg [Prun... 44 4e-06
ref|XP_009373109.1| PREDICTED: putative pentatricopeptide repeat... 44 6e-06
ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selag... 46 6e-06
ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selag... 46 6e-06
ref|XP_012858868.1| PREDICTED: pentatricopeptide repeat-containi... 49 1e-05
>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321449|gb|EEF05406.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 682
Score = 45.1 bits (105), Expect(2) = 1e-06
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -1
Query: 302 VKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
VK+L+VCGDC+ A K E + + FH D +CSCKDYW
Sbjct: 636 VKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPGKRKMV 304
EKEH G S KL++AF LIS AP + +V
Sbjct: 606 EKEHFIGCHSEKLAVAFGLISTAPNDKILV 635
>ref|XP_011032581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820 [Populus euphratica]
gi|743866864|ref|XP_011032582.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At3g08820
[Populus euphratica] gi|743866868|ref|XP_011032583.1|
PREDICTED: putative pentatricopeptide repeat-containing
protein At3g08820 [Populus euphratica]
gi|743866870|ref|XP_011032584.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At3g08820
[Populus euphratica]
Length = 682
Score = 45.8 bits (107), Expect(2) = 2e-06
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = -1
Query: 335 SVMPLENVKWFVKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
S P + ++ VK+L+VCGDC+ A K E + + FH D +CSCKDYW
Sbjct: 626 STAPNDKIR-VVKNLRVCGDCHEAVKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPGKR 313
EKEH G S KL++AF LIS AP +
Sbjct: 606 EKEHFIGCHSEKLAVAFGLISTAPNDK 632
>ref|XP_011019049.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820 [Populus euphratica]
Length = 682
Score = 45.1 bits (105), Expect(2) = 2e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = -1
Query: 335 SVMPLENVKWFVKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
S P + ++ VK+L+VCGDC+ A K E + + FH D CSCKDYW
Sbjct: 626 STAPNDKIR-VVKNLRVCGDCHEAVKHISRIAGREIIVRDNNRFHCFNDGSCSCKDYW 682
Score = 33.1 bits (74), Expect(2) = 2e-06
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPGKR 313
EKEH G S KL+IAF LIS AP +
Sbjct: 606 EKEHFIGCHSEKLAIAFGLISTAPNDK 632
>ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein
SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 47.4 bits (111), Expect(2) = 2e-06
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1
Query: 302 VKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
VK+L+VC DC+ ATK + + FH+L+D CSCKDYW
Sbjct: 456 VKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHLEDGQCSCKDYW 502
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPG 319
EKE + G+ S KL+IAF LI+ PG
Sbjct: 426 EKEQLIGLHSEKLAIAFGLIATPPG 450
>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855145|gb|EEE92692.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 619
Score = 44.7 bits (104), Expect(2) = 3e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = -1
Query: 335 SVMPLENVKWFVKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
S P + ++ VK+L+VCGDC+ A K E + + FH D CSCKDYW
Sbjct: 563 STAPNDKIR-VVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 33.1 bits (74), Expect(2) = 3e-06
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPGKR 313
EKEH G S KL+IAF LIS AP +
Sbjct: 543 EKEHFIGCHSEKLAIAFGLISTAPNDK 569
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820 [Vitis vinifera]
Length = 686
Score = 46.2 bits (108), Expect(2) = 3e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -1
Query: 302 VKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
VK+L+VCGDC++A K S E + + FH ++ CSC DYW
Sbjct: 640 VKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 31.2 bits (69), Expect(2) = 3e-06
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAP 322
EKEH G S KL+IAF LIS P
Sbjct: 610 EKEHFLGCHSEKLAIAFGLISATP 633
>ref|XP_011623588.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Amborella trichopoda]
Length = 623
Score = 46.6 bits (109), Expect(2) = 3e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -1
Query: 302 VKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
VK+L+VCGDC+ ATK E + + FH+ + CSC+DYW
Sbjct: 577 VKNLRVCGDCHSATKFISKVEGREIIVRDRIRFHHFRGGECSCRDYW 623
Score = 30.8 bits (68), Expect(2) = 3e-06
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPG 319
EKEH + S KL+IAF LI+ PG
Sbjct: 547 EKEHALNVHSEKLAIAFGLIASMPG 571
>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 46.2 bits (108), Expect(2) = 3e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -1
Query: 302 VKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
VK+L+VCGDC++A K S E + + FH ++ CSC DYW
Sbjct: 450 VKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496
Score = 31.2 bits (69), Expect(2) = 3e-06
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAP 322
EKEH G S KL+IAF LIS P
Sbjct: 420 EKEHFLGCHSEKLAIAFGLISATP 443
>ref|XP_008244805.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820 [Prunus mume]
Length = 688
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = -1
Query: 335 SVMPLENVKWFVKSLKVCGDCNLATK--PNISDRW---EENNQKTSVPFHYLKDDMCSCK 171
S P + ++ VK+L+VCGDC+ A K I++R +NN+ FH D CSCK
Sbjct: 632 STAPKDTIR-VVKNLRVCGDCHEAIKLISKITERQIIVRDNNR-----FHCFIDGYCSCK 685
Query: 170 DYW 162
DYW
Sbjct: 686 DYW 688
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAP 322
EKEH G S KL+IAF LIS AP
Sbjct: 612 EKEHFLGCHSEKLAIAFGLISTAP 635
>ref|XP_007207055.1| hypothetical protein PRUPE_ppb002198mg [Prunus persica]
gi|462402697|gb|EMJ08254.1| hypothetical protein
PRUPE_ppb002198mg [Prunus persica]
Length = 636
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = -1
Query: 335 SVMPLENVKWFVKSLKVCGDCNLATK--PNISDRW---EENNQKTSVPFHYLKDDMCSCK 171
S P + ++ VK+L+VCGDC+ A K I++R +NN+ FH D CSCK
Sbjct: 580 STAPKDTIR-VVKNLRVCGDCHEAIKLISKITERQIIIRDNNR-----FHCFIDGSCSCK 633
Query: 170 DYW 162
DYW
Sbjct: 634 DYW 636
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAP 322
EKEH G S KL+IAF LIS AP
Sbjct: 560 EKEHFLGCHSEKLAIAFGLISTAP 583
>ref|XP_009373109.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820 [Pyrus x bretschneideri]
Length = 689
Score = 44.3 bits (103), Expect(2) = 6e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = -1
Query: 335 SVMPLENVKWFVKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
S P + ++ VK+L+VCGDC+ A K E + + FH D CSCKDYW
Sbjct: 633 STAPTDTIR-VVKNLRVCGDCHEAIKLISKITGREIIVRDNNRFHCFIDGSCSCKDYW 689
Score = 32.3 bits (72), Expect(2) = 6e-06
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAP 322
EKEH G S KL++AF LIS AP
Sbjct: 613 EKEHFLGCHSEKLAVAFGLISTAP 636
>ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein
SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 45.8 bits (107), Expect(2) = 6e-06
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -1
Query: 302 VKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
VK+L+VC DC+ ATK + + FH+ +D CSCKDYW
Sbjct: 516 VKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 30.8 bits (68), Expect(2) = 6e-06
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPG 319
EKE + G+ S KL+IAF LI+ PG
Sbjct: 486 EKEQLIGLHSEKLAIAFGLIATPPG 510
>ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein
SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 45.8 bits (107), Expect(2) = 6e-06
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -1
Query: 302 VKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
VK+L+VC DC+ ATK + + FH+ +D CSCKDYW
Sbjct: 403 VKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 449
Score = 30.8 bits (68), Expect(2) = 6e-06
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPG 319
EKE + G+ S KL+IAF LI+ PG
Sbjct: 373 EKEQLIGLHSEKLAIAFGLIATPPG 397
>ref|XP_012858868.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Erythranthe guttatus]
Length = 622
Score = 48.5 bits (114), Expect(2) = 1e-05
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -1
Query: 302 VKSLKVCGDCNLATKPNISDRWEENNQKTSVPFHYLKDDMCSCKDYW 162
VK+L+VCGDC+LA K E + FH+ KD CSCKDYW
Sbjct: 576 VKNLRVCGDCHLAIKLVSKIFRREIVVRDCSRFHHFKDGECSCKDYW 622
Score = 27.3 bits (59), Expect(2) = 1e-05
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 393 EKEHMFGIQSNKLSIAFILISYAPG 319
EKE S K++IAF+LI+ PG
Sbjct: 546 EKETALSYHSEKIAIAFVLINTPPG 570