BLASTX nr result

ID: Cinnamomum24_contig00020917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00020917
         (407 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009045729.1| orf174 (mitochondrion) [Batis maritima] gi|6...    78   2e-19
gb|KJB09742.1| hypothetical protein B456_001G161800 [Gossypium r...   101   2e-19
ref|YP_009045728.1| orf112a (mitochondrion) [Batis maritima] gi|...    80   8e-13
ref|YP_173473.1| hypothetical protein NitaMp136 [Nicotiana tabac...    71   4e-10
emb|CBI33208.3| unnamed protein product [Vitis vinifera]               50   2e-08

>ref|YP_009045729.1| orf174 (mitochondrion) [Batis maritima] gi|655168503|gb|AIC83332.1|
           orf174 (mitochondrion) [Batis maritima]
          Length = 174

 Score = 78.2 bits (191), Expect(2) = 2e-19
 Identities = 48/93 (51%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +1

Query: 73  PSAAGGRMENFLLRAIPAGPGVMNIDLPPAVFSSYHFTSFERSDLFGPHRAXXXXXXXXX 252
           PSA      +F       G GVMN D PPAVFSSYHFTS ERSDL GPHR          
Sbjct: 84  PSAGAQERTSFRFPLTIQG-GVMNRDPPPAVFSSYHFTSIERSDLIGPHRGGRRGRKGWL 142

Query: 253 XXXXXXXLV-APPLPLAHAYLFPGPRRDAELFF 348
                     +PP PL H YLF  PRRDAELFF
Sbjct: 143 VREQQRERARSPPPPLPHVYLF--PRRDAELFF 173



 Score = 44.3 bits (103), Expect(2) = 2e-19
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +2

Query: 5  NAGKAYLVKSVFFATSRITGIEPP 76
          NAG  YLV+SVFFATSRITGIEPP
Sbjct: 25 NAGIFYLVESVFFATSRITGIEPP 48


>gb|KJB09742.1| hypothetical protein B456_001G161800 [Gossypium raimondii]
          Length = 329

 Score =  101 bits (251), Expect = 2e-19
 Identities = 64/129 (49%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 MYHGPIYSSFSSKKE-FRISPGPGEQIGVGKRERGGYEXXXXXXXXXXXXXXXXXXVXXX 208
           MYHGPIYSSFSSKK+ FRISPGPGEQIGVGKRERG                         
Sbjct: 1   MYHGPIYSSFSSKKKKFRISPGPGEQIGVGKRERGATSPPPLLFPD-------------- 46

Query: 207 XXXXXXXXEVIGREDCWREIYIHYTRPGGYGSK*EILHPPASSRGGSIPVIRDVAKKTDL 28
                                 H + P     +  ILHPPASSRGGSIPVIRDVAKKT+ 
Sbjct: 47  ----------------------HPSLPSP-SPRPNILHPPASSRGGSIPVIRDVAKKTEK 83

Query: 27  TRYALPALR 1
            RY +PALR
Sbjct: 84  PRYEMPALR 92


>ref|YP_009045728.1| orf112a (mitochondrion) [Batis maritima]
           gi|655168502|gb|AIC83331.1| orf112a (mitochondrion)
           [Batis maritima]
          Length = 112

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 46/65 (70%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
 Frame = -2

Query: 397 TIFRNVSRPYLFIFFF-KKRVPHLSGARGTNRRGQEGEGGLRALSRCCSRTTHP-FPFAR 224
           TIFRNVS PYLFIFFF KKRVPHLSG  GTNRRG+EGEGG           T P FPFA 
Sbjct: 50  TIFRNVSWPYLFIFFFKKKRVPHLSG--GTNRRGEEGEGGYEPSPVAVPGPTIPSFPFAP 107

Query: 223 PGEVR 209
           PGEVR
Sbjct: 108 PGEVR 112


>ref|YP_173473.1| hypothetical protein NitaMp136 [Nicotiana tabacum]
           gi|56806638|dbj|BAD83539.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 137

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 45/87 (51%), Positives = 45/87 (51%)
 Frame = -3

Query: 399 LQYSGMYHGPIYSSFSSKKEFRISPGPGEQIGVGKRERGGYEXXXXXXXXXXXXXXXXXX 220
           LQY GMYHG IYS    KKEF IS   GEQIGVGK ERGGYE                  
Sbjct: 52  LQYFGMYHGSIYSLKKKKKEFCIS---GEQIGVGKSERGGYE--PSLVVVPGPPISSFPF 106

Query: 219 VXXXXXXXXXXXEVIGREDCWREIYIH 139
                       EVIGREDCWREI IH
Sbjct: 107 ARPGEIRFLERSEVIGREDCWREIPIH 133


>emb|CBI33208.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score = 49.7 bits (117), Expect(2) = 2e-08
 Identities = 31/72 (43%), Positives = 33/72 (45%)
 Frame = -3

Query: 348 KKEFRISPGPGEQIGVGKRERGGYEXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXEVIGR 169
           KKEFRIS GPGEQIG+   ER                                  EVIG+
Sbjct: 59  KKEFRISLGPGEQIGIRSLERS---------------------------------EVIGK 85

Query: 168 EDCWREIYIHYT 133
           EDCWREI IHYT
Sbjct: 86  EDCWREISIHYT 97



 Score = 35.4 bits (80), Expect(2) = 2e-08
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 397 TIFRNVSRPYLFIFFFKKR 341
           TIFRNVS PYLFIFF KK+
Sbjct: 41  TIFRNVSWPYLFIFFKKKK 59


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