BLASTX nr result
ID: Cinnamomum24_contig00020863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00020863
(402 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008778816.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
ref|XP_010270795.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
emb|CBI24106.3| unnamed protein product [Vitis vinifera] 82 1e-13
emb|CBI27495.3| unnamed protein product [Vitis vinifera] 82 1e-13
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
emb|CAN71209.1| hypothetical protein VITISV_030057 [Vitis vinifera] 82 1e-13
gb|KNA18466.1| hypothetical protein SOVF_070500 [Spinacia oleracea] 80 5e-13
ref|XP_010492155.1| PREDICTED: pentatricopeptide repeat-containi... 80 5e-13
ref|XP_010043883.1| PREDICTED: pentatricopeptide repeat-containi... 80 5e-13
dbj|BAB10598.1| unnamed protein product [Arabidopsis thaliana] 80 8e-13
ref|XP_002871585.1| pentatricopeptide repeat-containing protein ... 80 8e-13
dbj|BAD95045.1| putative protein [Arabidopsis thaliana] 80 8e-13
ref|NP_196881.2| pentatricopeptide repeat-containing protein [Ar... 80 8e-13
ref|XP_010453475.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 79 1e-12
ref|XP_002521865.1| pentatricopeptide repeat-containing protein,... 79 1e-12
ref|XP_006289562.1| hypothetical protein CARUB_v10003108mg [Caps... 79 1e-12
ref|XP_013679829.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-12
ref|XP_012485361.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-12
ref|XP_012485362.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-12
>ref|XP_008778816.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Phoenix dactylifera]
Length = 614
Score = 89.0 bits (219), Expect = 1e-15
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSK SR DEL+ LLQD++SEG GLDERLY+SA+NALRDAGL V +KWF++SFG+ K
Sbjct: 551 GVFSKGSRFDELVKLLQDMKSEGTGLDERLYESALNALRDAGLQVHMKWFEKSFGLKK 608
>ref|XP_010270795.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Nelumbo nucifera]
Length = 636
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/54 (74%), Positives = 49/54 (90%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
GVFSK+SRI+EL+ LLQD++ EG GLD +LY+SA+NALRDAGL VQVKWF+ESF
Sbjct: 552 GVFSKSSRINELMKLLQDMKLEGTGLDVKLYRSALNALRDAGLQVQVKWFEESF 605
>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 82.4 bits (202), Expect = 1e-13
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
G+FSK+ R+DEL+ LLQD+++EG GLDERLY+SA+NALRDAGL +Q +W +ESF
Sbjct: 471 GIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESF 524
>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 82.4 bits (202), Expect = 1e-13
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
G+FSK+ R+DEL+ LLQD+++EG GLDERLY+SA+NALRDAGL +Q +W +ESF
Sbjct: 485 GIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESF 538
>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 82.4 bits (202), Expect = 1e-13
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
G+FSK+ R+DEL+ LLQD+++EG GLDERLY+SA+NALRDAGL +Q +W +ESF
Sbjct: 547 GIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESF 600
>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 609
Score = 82.4 bits (202), Expect = 1e-13
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
G+FSK+ R+DEL+ LLQD+++EG GLDERLY+SA+NALRDAGL +Q +W +ESF
Sbjct: 548 GIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESF 601
>emb|CAN71209.1| hypothetical protein VITISV_030057 [Vitis vinifera]
Length = 109
Score = 82.4 bits (202), Expect = 1e-13
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
G+FSK+ R+DEL+ LLQD+++EG GLDERLY+SA+NALRDAGL +Q +W +ESF
Sbjct: 53 GIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESF 106
>gb|KNA18466.1| hypothetical protein SOVF_070500 [Spinacia oleracea]
Length = 627
Score = 80.5 bits (197), Expect = 5e-13
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 6/71 (8%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGI---- 233
GVFSK SRIDEL+ LLQD+++ G+ LD RLYKSA+NALRD GL +QV+W +E+FG+
Sbjct: 545 GVFSKISRIDELIKLLQDLKAGGVRLDMRLYKSALNALRDVGLEMQVRWLEETFGMPTVA 604
Query: 232 --AKGLIDNGG 206
L+ NGG
Sbjct: 605 APVDRLVLNGG 615
>ref|XP_010492155.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Camelina sativa]
Length = 614
Score = 80.5 bits (197), Expect = 5e-13
Identities = 43/82 (52%), Positives = 54/82 (65%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAKGL 221
GVFSKTSRIDEL+ LLQD++ EG LD RLY SA+NALRDAGL Q++W +ESF A+
Sbjct: 533 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYTSALNALRDAGLNSQIRWLQESFDAAQTS 592
Query: 220 IDNGGTRKSYPMIATGGDQSTL 155
K+ + G +S L
Sbjct: 593 ASRYSNMKNTKNLQGSGVESKL 614
>ref|XP_010043883.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Eucalyptus grandis]
gi|629121411|gb|KCW85901.1| hypothetical protein
EUGRSUZ_B02618 [Eucalyptus grandis]
Length = 615
Score = 80.5 bits (197), Expect = 5e-13
Identities = 38/58 (65%), Positives = 49/58 (84%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSK+SRI+EL+ LQD++SEG LD RLY SA+NALRD+GL VQ +WF+ESF +A+
Sbjct: 552 GVFSKSSRIEELIRFLQDMKSEGTELDGRLYGSALNALRDSGLLVQARWFQESFSMAQ 609
>dbj|BAB10598.1| unnamed protein product [Arabidopsis thaliana]
Length = 563
Score = 79.7 bits (195), Expect = 8e-13
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSKTSRIDEL+ LLQD++ EG LD RLY SA+NALRDAGL Q++W +ESF A+
Sbjct: 490 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDAAQ 547
>ref|XP_002871585.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317422|gb|EFH47844.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 609
Score = 79.7 bits (195), Expect = 8e-13
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSKTSRIDEL+ LLQD++ EG LD RLY SA+NALRDAGL Q++W +ESF A+
Sbjct: 536 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDAAQ 593
>dbj|BAD95045.1| putative protein [Arabidopsis thaliana]
Length = 126
Score = 79.7 bits (195), Expect = 8e-13
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSKTSRIDEL+ LLQD++ EG LD RLY SA+NALRDAGL Q++W +ESF A+
Sbjct: 53 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDAAQ 110
>ref|NP_196881.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75115356|sp|Q66GP4.1|PP379_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g13770, chloroplastic; Flags: Precursor
gi|51536486|gb|AAU05481.1| At5g13770 [Arabidopsis
thaliana] gi|53850491|gb|AAU95422.1| At5g13770
[Arabidopsis thaliana] gi|332004556|gb|AED91939.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 609
Score = 79.7 bits (195), Expect = 8e-13
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSKTSRIDEL+ LLQD++ EG LD RLY SA+NALRDAGL Q++W +ESF A+
Sbjct: 536 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDAAQ 593
>ref|XP_010453475.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g13770, chloroplastic-like [Camelina sativa]
Length = 602
Score = 79.3 bits (194), Expect = 1e-12
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSKTSRIDEL+ LLQD++ EG LD RLY SA+NALRDAGL Q++W +ESF A+
Sbjct: 533 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYTSALNALRDAGLNSQIRWLQESFDAAQ 590
>ref|XP_002521865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538903|gb|EEF40501.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 449
Score = 79.3 bits (194), Expect = 1e-12
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
GVFSK RIDELL LLQDI++EG LD RLY+SA NALRDAGL +Q KW +ESF
Sbjct: 393 GVFSKIGRIDELLKLLQDIKTEGTQLDGRLYRSAFNALRDAGLQMQAKWMQESF 446
>ref|XP_006289562.1| hypothetical protein CARUB_v10003108mg [Capsella rubella]
gi|482558268|gb|EOA22460.1| hypothetical protein
CARUB_v10003108mg [Capsella rubella]
Length = 612
Score = 79.3 bits (194), Expect = 1e-12
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSKTSRIDEL+ LLQD++ EG LD RLY SA+NALRDAGL Q++W +ESF A+
Sbjct: 537 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYTSALNALRDAGLNSQIRWLQESFDAAQ 594
>ref|XP_013679829.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Brassica napus]
gi|923524857|ref|XP_013679847.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Brassica napus]
Length = 613
Score = 78.6 bits (192), Expect = 2e-12
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESFGIAK 227
GVFSKTSRIDEL+ LLQD++ E LD RLY SA+NALRDAGL Q++W +ESF IA+
Sbjct: 536 GVFSKTSRIDELMRLLQDMRVERTRLDTRLYSSALNALRDAGLNSQIRWLQESFDIAQ 593
>ref|XP_012485361.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic isoform X1 [Gossypium raimondii]
Length = 617
Score = 78.6 bits (192), Expect = 2e-12
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
GVFSKTSRIDEL+ LLQD+++EG LD RLY SAMNALRDAGL QVKW +++F
Sbjct: 555 GVFSKTSRIDELVRLLQDMKAEGTELDGRLYHSAMNALRDAGLENQVKWLQKNF 608
>ref|XP_012485362.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic isoform X2 [Gossypium raimondii]
gi|763768528|gb|KJB35743.1| hypothetical protein
B456_006G126500 [Gossypium raimondii]
Length = 585
Score = 78.6 bits (192), Expect = 2e-12
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = -3
Query: 400 GVFSKTSRIDELLNLLQDIQSEGIGLDERLYKSAMNALRDAGLWVQVKWFKESF 239
GVFSKTSRIDEL+ LLQD+++EG LD RLY SAMNALRDAGL QVKW +++F
Sbjct: 523 GVFSKTSRIDELVRLLQDMKAEGTELDGRLYHSAMNALRDAGLENQVKWLQKNF 576