BLASTX nr result
ID: Cinnamomum24_contig00020658
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00020658
(580 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1... 152 4e-59
gb|AFK49064.1| unknown [Lotus japonicus] 188 2e-45
ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococ... 143 5e-32
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo... 140 5e-31
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ... 124 4e-26
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m... 101 3e-19
gb|KQJ97119.1| hypothetical protein BRADI_3g28913 [Brachypodium ... 100 9e-19
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm... 95 2e-17
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays] 95 2e-17
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr... 94 4e-17
gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays] 86 2e-14
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun... 75 3e-14
gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max] 82 3e-13
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata] 80 7e-13
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re... 70 8e-13
gb|ALN98160.1| ribosomal protein S12 (chloroplast) [Dendrobium c... 65 5e-12
ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128, p... 67 8e-12
ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arab... 76 1e-11
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic... 74 7e-11
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB... 70 6e-10
>emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1| Putative 8.8 kDa
protein in rps12-tRNA-Val intergenic region [Glycine
soja]
Length = 143
Score = 152 bits (384), Expect(2) = 4e-59
Identities = 74/83 (89%), Positives = 77/83 (92%)
Frame = -3
Query: 251 LHYFGNLRTRSYGYVKYRISNPSRKRRETATQFKVSKQNSILDFIDTYQILWKAVFDESR 72
LHYFGN RT+SYGYVKYRISNPSRKR T TQF+VSKQNSILD IDTY+ILWKAVFDESR
Sbjct: 60 LHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQNSILDIIDTYRILWKAVFDESR 119
Query: 71 MYGLEGDLSYLSRSTLQYGVKKP 3
MYGLEGDLSYLSRSTLQYG KKP
Sbjct: 120 MYGLEGDLSYLSRSTLQYGAKKP 142
Score = 103 bits (256), Expect(2) = 4e-59
Identities = 53/62 (85%), Positives = 54/62 (87%)
Frame = -1
Query: 433 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 254
MRQKIFFLK+FDSEL YVQG I K FQRFSLTLSVSTNNSK LDFFR GPSQIAMIRST
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTL 60
Query: 253 FY 248
Y
Sbjct: 61 HY 62
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 188 bits (477), Expect = 2e-45
Identities = 100/129 (77%), Positives = 107/129 (82%)
Frame = -3
Query: 389 IICPRFNIEIISEVFPYFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHYFGNLRTRSYGY 210
+ICPR NIE ISEVF FVRVNKQFE+PRLF R + LHYF NLRT+SYGY
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58
Query: 209 VKYRISNPSRKRRETATQFKVSKQNSILDFIDTYQILWKAVFDESRMYGLEGDLSYLSRS 30
VKYRISNPS+KRRET TQF+VSKQNSILD IDTY+IL KAVFDESRMYGLEGDLSYLSRS
Sbjct: 59 VKYRISNPSKKRRETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRS 118
Query: 29 TLQYGVKKP 3
TLQYG KKP
Sbjct: 119 TLQYGAKKP 127
>ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
gi|836614536|ref|YP_009145127.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521025|gb|AKJ85882.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521026|gb|AKJ85883.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
Length = 121
Score = 143 bits (361), Expect = 5e-32
Identities = 70/73 (95%), Positives = 71/73 (97%)
Frame = -3
Query: 221 SYGYVKYRISNPSRKRRETATQFKVSKQNSILDFIDTYQILWKAVFDESRMYGLEGDLSY 42
SYGYVKYRISNPSRKRRET TQFKVSKQNSILD IDTY+ILWKAVFDESRMYGLEGDLSY
Sbjct: 48 SYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSY 107
Query: 41 LSRSTLQYGVKKP 3
LSRSTLQYGVKKP
Sbjct: 108 LSRSTLQYGVKKP 120
>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
gi|32480905|ref|NP_862814.1| hypothetical protein
CafeCp092 [Calycanthus floridus var. glaucus]
gi|75146241|sp|Q7Y618.1|YCX1_CALFG RecName:
Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region (chloroplast) [Calycanthus floridus
var. glaucus] gi|32399427|emb|CAD28768.1| hypothetical
protein [Calycanthus floridus var. glaucus]
gi|32399441|emb|CAD28782.1| hypothetical protein
[Calycanthus floridus var. glaucus]
Length = 75
Score = 140 bits (353), Expect = 5e-31
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = -1
Query: 433 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 254
MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIA IRSTS
Sbjct: 1 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTS 60
Query: 253 FYTISET*GLDRMDM 209
FYTISET GL+RMDM
Sbjct: 61 FYTISETQGLNRMDM 75
>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana] gi|58802847|gb|AAW82567.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 77
Score = 124 bits (310), Expect = 4e-26
Identities = 65/75 (86%), Positives = 66/75 (88%)
Frame = +3
Query: 252 KEVLRIIAI*LGPVLKKSRYFELFVDTDKVRENL*NDFNIEPWTYNSSESNLFRKKIFCL 431
KEVLRIIAI LGPVLKKSRYFELFVDTDK RENL N NI PWTY+SSESNLFRKK FCL
Sbjct: 3 KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCL 62
Query: 432 MVACSSPLTKLS*LG 476
MVACSSPL KLS LG
Sbjct: 63 MVACSSPLPKLSLLG 77
>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
Length = 57
Score = 101 bits (251), Expect = 3e-19
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = -3
Query: 161 TQFKVSKQNSILDFIDTYQILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
TQFKVSKQNSILD ID Y+ILWKAVFDESRMYGLEGDLSY+SRSTLQYG KKP
Sbjct: 3 TQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKP 55
>gb|KQJ97119.1| hypothetical protein BRADI_3g28913 [Brachypodium distachyon]
Length = 84
Score = 99.8 bits (247), Expect = 9e-19
Identities = 61/86 (70%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Frame = -1
Query: 433 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 254
MRQKI FLKRFDSELLY RFSLTLSVSTNNSKYLDFFRTGPS +AMIRSTS
Sbjct: 1 MRQKILFLKRFDSELLY----------RFSLTLSVSTNNSKYLDFFRTGPS-LAMIRSTS 49
Query: 253 F--YTISET*GLDRMDM*NTGFPILA 182
F I ++ DRMDM NTGF ILA
Sbjct: 50 FSITLIRKSKDSDRMDMENTGFSILA 75
>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
gi|223541020|gb|EEF42577.1| conserved hypothetical
protein [Ricinus communis]
Length = 286
Score = 95.1 bits (235), Expect = 2e-17
Identities = 47/55 (85%), Positives = 48/55 (87%)
Frame = +3
Query: 84 EYGFPQNLICIYEIEYGILFTHFKLSSRFPPFPARIGNPVFYISIRSSP*VSEIV 248
EYGF QN ICIYEIEYGILFTHFKLS PPFPARIGNPVFYISIR SP VS+IV
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPFPARIGNPVFYISIRLSPRVSKIV 286
>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
Length = 53
Score = 95.1 bits (235), Expect = 2e-17
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = +3
Query: 75 TFIEYGFPQNLICIYEIEYGILFTHFKLSSRFPPFPARIGNPVFYISIRSSP 230
TFIEYGFPQN I IYEIEYGILFTHFKLS FPPFPAR GNPVF ISIRSSP
Sbjct: 2 TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPFPARTGNPVFSISIRSSP 53
>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
gi|134093268|ref|YP_001109569.1| hypothetical protein
Poptr_cp092 [Populus trichocarpa]
gi|133712111|gb|ABO36754.1| conserved hypothetical
protein [Populus trichocarpa]
gi|133712130|gb|ABO36773.1| conserved hypothetical
protein [Populus trichocarpa]
Length = 65
Score = 94.4 bits (233), Expect = 4e-17
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = -1
Query: 343 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISET*GLDRMDM*NTGFPILA 182
+TLSVSTNNSK LDFFR GPSQIAMIRSTSFYTISET GL+RMDM NTGFPILA
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILA 54
>gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]
Length = 52
Score = 85.5 bits (210), Expect = 2e-14
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = -3
Query: 377 RFNIEIISEVFPYFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHY 243
+ N+EI+SEVFPYFVRVNKQFEIPRLF NRSESNSNDSKHFF HY
Sbjct: 3 KVNMEILSEVFPYFVRVNKQFEIPRLFQNRSESNSNDSKHFFFHY 47
>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
gi|150251552|ref|YP_001312284.1| hypothetical protein
CYtaCp120 [Cycas taitungensis]
gi|149941571|dbj|BAF64995.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|149941602|dbj|BAF65026.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
Length = 64
Score = 74.7 bits (182), Expect(2) = 3e-14
Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +2
Query: 167 FPSFSC*DWKSCILHIHTIESLGFRNSVKR-SASNHCYLTRTCSKKVEVF 313
F FSC DWKS ILHI TI+SLG + SVK+ S SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKKVEVF 64
Score = 30.8 bits (68), Expect(2) = 3e-14
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 129 YGILFTHFKLSSRFPPF 179
Y ILFTHFKLS RF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>gb|KRH54918.1| hypothetical protein GLYMA_06G218700 [Glycine max]
Length = 87
Score = 81.6 bits (200), Expect = 3e-13
Identities = 42/51 (82%), Positives = 43/51 (84%)
Frame = -1
Query: 433 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPS 281
MRQKIFFLK+FDSEL YVQG I K FQRFS TLSVSTNNSK LDFFR G S
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSWTLSVSTNNSKCLDFFRIGLS 51
>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
Length = 40
Score = 80.1 bits (196), Expect = 7e-13
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = -3
Query: 119 IDTYQILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
IDTY ILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39
>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
gi|372863084|gb|AEX99157.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
Length = 60
Score = 69.7 bits (169), Expect(2) = 8e-13
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +2
Query: 167 FPSFSC*DWKSCILHIHTIESLGFRNSVKRSASNHCYLTRTCSKKVEVF 313
F FSC DWKS ILHI TI+SLG + SV SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSV---VSNHCYLTRTCSKKVEVF 60
Score = 30.8 bits (68), Expect(2) = 8e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 129 YGILFTHFKLSSRFPPF 179
Y ILFTHFKLS RF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>gb|ALN98160.1| ribosomal protein S12 (chloroplast) [Dendrobium chrysotoxum]
Length = 101
Score = 64.7 bits (156), Expect(2) = 5e-12
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -1
Query: 352 RFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSF 251
RFSL LSVSTNNSKYLDFFRTGPS IAMIRSTSF
Sbjct: 38 RFSLPLSVSTNNSKYLDFFRTGPSPIAMIRSTSF 71
Score = 33.1 bits (74), Expect(2) = 5e-12
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2
Query: 249 TLFRKPKDSIVWICK 205
TLFRKPKDSIVWI K
Sbjct: 74 TLFRKPKDSIVWISK 88
>ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128, partial [Sorghum
bicolor] gi|241935502|gb|EES08647.1| hypothetical
protein SORBIDRAFT_05g021128, partial [Sorghum bicolor]
Length = 67
Score = 67.0 bits (162), Expect(2) = 8e-12
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 373 SILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 254
SI K F+RFSLTLSVSTN+SKYLDF R GPSQIAMIRSTS
Sbjct: 9 SIWKLFERFSLTLSVSTNSSKYLDFLRIGPSQIAMIRSTS 48
Score = 30.0 bits (66), Expect(2) = 8e-12
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 261 ALLFTLFRKPKDSIVWICKI 202
+L TLF+K KDSIVWI KI
Sbjct: 48 SLSITLFQKCKDSIVWIWKI 67
>ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata] gi|297340526|gb|EFH70943.1| hypothetical protein
ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 76.3 bits (186), Expect = 1e-11
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 343 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISET*GLDRMDM 209
+TLSVSTNNSK LDFFRT PSQIAMIRST FYTISET GL+RMDM
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60
>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
gi|575882162|emb|CDL78835.1| ribosomal protein S12
(chloroplast) [Pinguicula ehlersiae]
Length = 156
Score = 73.6 bits (179), Expect = 7e-11
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -3
Query: 119 IDTYQILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
IDTY+IL KAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 117 IDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155
>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
koraiensis]
Length = 40
Score = 70.5 bits (171), Expect = 6e-10
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = -1
Query: 115 IHIKFCGKPYSMKVVCTAWREIFHIFRDPPYNMGSKSQ 2
+ I+ CGKPYS KVVCT WREIFH FRDPPYNM SKSQ
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38