BLASTX nr result
ID: Cinnamomum24_contig00020533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00020533
(344 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHN37719.1| DNA-directed RNA polymerase I subunit RPA2 [Glyci... 135 2e-29
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub... 135 2e-29
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 135 2e-29
ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub... 133 2e-29
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub... 133 2e-29
ref|XP_010278175.1| PREDICTED: DNA-directed RNA polymerase I sub... 133 6e-29
gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glyci... 131 2e-28
ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer... 131 2e-28
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 131 2e-28
gb|KGN47756.1| hypothetical protein Csa_6G400300 [Cucumis sativus] 130 4e-28
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 130 4e-28
ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I sub... 130 5e-28
gb|KJB73178.1| hypothetical protein B456_011G220100 [Gossypium r... 129 7e-28
ref|XP_012455618.1| PREDICTED: DNA-directed RNA polymerase I sub... 129 7e-28
gb|KOM36455.1| hypothetical protein LR48_Vigan02g260500 [Vigna a... 129 9e-28
gb|KDO43728.1| hypothetical protein CISIN_1g0011792mg, partial [... 128 2e-27
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 128 2e-27
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr... 128 2e-27
ref|XP_012068705.1| PREDICTED: probable DNA-directed RNA polymer... 127 4e-27
ref|XP_012068704.1| PREDICTED: DNA-directed RNA polymerase I sub... 127 4e-27
>gb|KHN37719.1| DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]
Length = 642
Score = 135 bits (339), Expect = 2e-29
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+LAT+FIQ QKR R IGGLPPGRAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 560 DVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYL 619
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTL+LSD A
Sbjct: 620 AAELAAMNIKMTLKLSDGA 638
>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
[Glycine max]
Length = 1151
Score = 135 bits (339), Expect = 2e-29
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+LAT+FIQ QKR R IGGLPPGRAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 1069 DVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYL 1128
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTL+LSD A
Sbjct: 1129 AAELAAMNIKMTLKLSDGA 1147
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
[Glycine max] gi|947071775|gb|KRH20666.1| hypothetical
protein GLYMA_13G192600 [Glycine max]
Length = 1175
Score = 135 bits (339), Expect = 2e-29
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+LAT+FIQ QKR R IGGLPPGRAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 1093 DVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYL 1152
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTL+LSD A
Sbjct: 1153 AAELAAMNIKMTLKLSDGA 1171
>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
[Vitis vinifera]
Length = 1178
Score = 133 bits (335), Expect(2) = 2e-29
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGSIL TS IQ QKRA R IGGLPPGRAPKKV CHAC+TSKGMETV+MP+IFR L
Sbjct: 1098 DVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFL 1157
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTLQLS+ A
Sbjct: 1158 AAELAAMNIKMTLQLSNGA 1176
Score = 21.9 bits (45), Expect(2) = 2e-29
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 239 MTLQLSNQAGA 271
MTLQLSN AGA
Sbjct: 1168 MTLQLSNGAGA 1178
>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X2
[Vitis vinifera] gi|731414307|ref|XP_010659084.1|
PREDICTED: DNA-directed RNA polymerase I subunit RPA2
isoform X2 [Vitis vinifera]
Length = 1169
Score = 133 bits (335), Expect(2) = 2e-29
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGSIL TS IQ QKRA R IGGLPPGRAPKKV CHAC+TSKGMETV+MP+IFR L
Sbjct: 1089 DVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFL 1148
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTLQLS+ A
Sbjct: 1149 AAELAAMNIKMTLQLSNGA 1167
Score = 21.9 bits (45), Expect(2) = 2e-29
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 239 MTLQLSNQAGA 271
MTLQLSN AGA
Sbjct: 1159 MTLQLSNGAGA 1169
>ref|XP_010278175.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nelumbo
nucifera]
Length = 1350
Score = 133 bits (334), Expect = 6e-29
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGSIL TSFIQ QKRA R GGLPPGR PKKV CHACKTSKGMETVAMP++FR L
Sbjct: 1270 DVCSLCGSILTTSFIQPQKRAVREFGGLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYL 1329
Query: 183 AVELAAMNVKMTLQLS 230
A ELAAMN+K+TLQLS
Sbjct: 1330 AAELAAMNIKLTLQLS 1345
>gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]
Length = 1175
Score = 131 bits (330), Expect = 2e-28
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L T+F Q QKR R IGGLPPGRAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 1093 DVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYL 1152
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTL+LSD A
Sbjct: 1153 AAELAAMNIKMTLKLSDGA 1171
>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X2 [Glycine max]
Length = 1004
Score = 131 bits (330), Expect = 2e-28
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L T+F Q QKR R IGGLPPGRAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 922 DVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYL 981
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTL+LSD A
Sbjct: 982 AAELAAMNIKMTLKLSDGA 1000
>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Glycine max] gi|947055288|gb|KRH04741.1|
hypothetical protein GLYMA_17G183400 [Glycine max]
Length = 1175
Score = 131 bits (330), Expect = 2e-28
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L T+F Q QKR R IGGLPPGRAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 1093 DVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYL 1152
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTL+LSD A
Sbjct: 1153 AAELAAMNIKMTLKLSDGA 1171
>gb|KGN47756.1| hypothetical protein Csa_6G400300 [Cucumis sativus]
Length = 1253
Score = 130 bits (327), Expect = 4e-28
Identities = 60/79 (75%), Positives = 69/79 (87%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L +SF+Q KRA R IGGLPPG+APK+V CHACKTSKGMETVAMP++F+ L
Sbjct: 1174 DVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYL 1233
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTLQLS A
Sbjct: 1234 AAELAAMNIKMTLQLSSGA 1252
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis
sativus]
Length = 1173
Score = 130 bits (327), Expect = 4e-28
Identities = 60/79 (75%), Positives = 69/79 (87%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L +SF+Q KRA R IGGLPPG+APK+V CHACKTSKGMETVAMP++F+ L
Sbjct: 1094 DVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYL 1153
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTLQLS A
Sbjct: 1154 AAELAAMNIKMTLQLSSGA 1172
>ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis melo]
Length = 1173
Score = 130 bits (326), Expect = 5e-28
Identities = 60/79 (75%), Positives = 70/79 (88%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGSIL +SF+Q KRA R IGGLPPG+APK+V CHACKTSKGMETVAMP++F+ L
Sbjct: 1094 DVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYL 1153
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTL+LS+ A
Sbjct: 1154 AAELAAMNIKMTLELSNGA 1172
>gb|KJB73178.1| hypothetical protein B456_011G220100 [Gossypium raimondii]
Length = 1107
Score = 129 bits (325), Expect = 7e-28
Identities = 60/79 (75%), Positives = 68/79 (86%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGSIL T+ IQ QKR R IGGLPP RAPKKV+CHAC+TSKGMETVAMP++FR L
Sbjct: 1027 DVCSLCGSILTTAIIQPQKRVVREIGGLPPARAPKKVMCHACQTSKGMETVAMPYVFRYL 1086
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMT+QL +A
Sbjct: 1087 AAELAAMNIKMTIQLGSEA 1105
>ref|XP_012455618.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Gossypium
raimondii] gi|763806239|gb|KJB73177.1| hypothetical
protein B456_011G220100 [Gossypium raimondii]
Length = 1178
Score = 129 bits (325), Expect = 7e-28
Identities = 60/79 (75%), Positives = 68/79 (86%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGSIL T+ IQ QKR R IGGLPP RAPKKV+CHAC+TSKGMETVAMP++FR L
Sbjct: 1098 DVCSLCGSILTTAIIQPQKRVVREIGGLPPARAPKKVMCHACQTSKGMETVAMPYVFRYL 1157
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMT+QL +A
Sbjct: 1158 AAELAAMNIKMTIQLGSEA 1176
>gb|KOM36455.1| hypothetical protein LR48_Vigan02g260500 [Vigna angularis]
Length = 1175
Score = 129 bits (324), Expect = 9e-28
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L T+FIQ QKR R IGGLPPGRA KKV CHAC+TSKGMETVAMP++FR L
Sbjct: 1093 DVCSLCGSMLTTTFIQPQKRPVRQIGGLPPGRAAKKVTCHACQTSKGMETVAMPYVFRYL 1152
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+KMTL+L+D A
Sbjct: 1153 AAELAAMNIKMTLKLTDGA 1171
>gb|KDO43728.1| hypothetical protein CISIN_1g0011792mg, partial [Citrus sinensis]
Length = 660
Score = 128 bits (321), Expect = 2e-27
Identities = 60/79 (75%), Positives = 67/79 (84%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L +FI QKRA R IGGLPP RAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 580 DVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYL 639
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+K+TLQL D A
Sbjct: 640 AAELAAMNIKITLQLGDGA 658
>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Citrus sinensis]
Length = 1175
Score = 128 bits (321), Expect = 2e-27
Identities = 60/79 (75%), Positives = 67/79 (84%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L +FI QKRA R IGGLPP RAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 1095 DVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYL 1154
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+K+TLQL D A
Sbjct: 1155 AAELAAMNIKITLQLGDGA 1173
>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
gi|557530116|gb|ESR41366.1| hypothetical protein
CICLE_v10024768mg [Citrus clementina]
Length = 1082
Score = 128 bits (321), Expect = 2e-27
Identities = 60/79 (75%), Positives = 67/79 (84%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCSLCGS+L +FI QKRA R IGGLPP RAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 1002 DVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYL 1061
Query: 183 AVELAAMNVKMTLQLSDQA 239
A ELAAMN+K+TLQL D A
Sbjct: 1062 AAELAAMNIKITLQLGDGA 1080
>ref|XP_012068705.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
isoform X2 [Jatropha curcas]
Length = 1037
Score = 127 bits (318), Expect = 4e-27
Identities = 59/76 (77%), Positives = 67/76 (88%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCS+CGSIL +SF+Q QKR R IGGLPP RAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 960 DVCSICGSILTSSFVQTQKRVVRDIGGLPPVRAPKKVACHACQTSKGMETVAMPYVFRYL 1019
Query: 183 AVELAAMNVKMTLQLS 230
A ELAAMN+KMT+QLS
Sbjct: 1020 AAELAAMNIKMTVQLS 1035
>ref|XP_012068704.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa2 isoform X1
[Jatropha curcas]
Length = 1179
Score = 127 bits (318), Expect = 4e-27
Identities = 59/76 (77%), Positives = 67/76 (88%)
Frame = +3
Query: 3 DVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSKGMETVAMPFIFRQL 182
DVCS+CGSIL +SF+Q QKR R IGGLPP RAPKKV CHAC+TSKGMETVAMP++FR L
Sbjct: 1102 DVCSICGSILTSSFVQTQKRVVRDIGGLPPVRAPKKVACHACQTSKGMETVAMPYVFRYL 1161
Query: 183 AVELAAMNVKMTLQLS 230
A ELAAMN+KMT+QLS
Sbjct: 1162 AAELAAMNIKMTVQLS 1177