BLASTX nr result
ID: Cinnamomum24_contig00020409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00020409
(288 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera] 89 1e-15
ref|XP_010930843.1| PREDICTED: pentatricopeptide repeat-containi... 84 4e-14
ref|XP_010244051.1| PREDICTED: pentatricopeptide repeat-containi... 84 5e-14
ref|XP_011629072.1| PREDICTED: pentatricopeptide repeat-containi... 81 3e-13
gb|ERM96297.1| hypothetical protein AMTR_s00001p00180560 [Ambore... 81 3e-13
ref|XP_009393799.1| PREDICTED: pentatricopeptide repeat-containi... 77 7e-12
ref|XP_008460899.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
ref|XP_010097008.1| hypothetical protein L484_024932 [Morus nota... 74 6e-11
ref|XP_011649399.1| PREDICTED: pentatricopeptide repeat-containi... 72 2e-10
gb|KGN62149.1| hypothetical protein Csa_2G302160 [Cucumis sativus] 72 2e-10
ref|XP_011007577.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_008670632.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
gb|ACM17537.1| putative pentatricopeptide [Oryza australiensis] 69 2e-09
tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea m... 68 3e-09
ref|XP_012087643.1| PREDICTED: pentatricopeptide repeat-containi... 67 5e-09
ref|XP_002306238.1| hypothetical protein POPTR_0005s06190g [Popu... 67 7e-09
ref|XP_011623525.1| PREDICTED: pentatricopeptide repeat-containi... 65 3e-08
gb|ERN06163.1| hypothetical protein AMTR_s00016p00115350 [Ambore... 65 3e-08
ref|XP_004493063.1| PREDICTED: pentatricopeptide repeat-containi... 65 3e-08
>ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780
[Vitis vinifera] gi|296088567|emb|CBI37558.3| unnamed
protein product [Vitis vinifera]
Length = 492
Score = 89.0 bits (219), Expect = 1e-15
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = -2
Query: 191 SMSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEM 12
S+S +LR C+P S+I+ KQTHAQIL GF+P++TLQTDLLL+YSKC L DAR+VFD+M
Sbjct: 8 SLSCILRKCVPHSAISQAKQTHAQILVHGFIPNITLQTDLLLVYSKCGVLQDARKVFDKM 67
Query: 11 PER 3
ER
Sbjct: 68 VER 70
>emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera]
Length = 880
Score = 89.0 bits (219), Expect = 1e-15
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = -2
Query: 191 SMSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEM 12
S+S +LR C+P S+I+ KQTHAQIL GF+P++TLQTDLLL+YSKC L DAR+VFD+M
Sbjct: 438 SLSCILRKCVPHSAISQAKQTHAQILVHGFIPNITLQTDLLLVYSKCGVLQDARKVFDKM 497
Query: 11 PER 3
ER
Sbjct: 498 VER 500
>ref|XP_010930843.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Elaeis guineensis]
Length = 499
Score = 84.0 bits (206), Expect = 4e-14
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = -2
Query: 188 MSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMP 9
+S+LLR+C PLS++ PGKQ HAQ +A G LPH TL+TDL+LMYS+C+H AR+VFD M
Sbjct: 15 LSSLLRSCAPLSALRPGKQAHAQAIAHGLLPHATLETDLVLMYSRCSHPHLARQVFDRML 74
Query: 8 ER 3
R
Sbjct: 75 HR 76
>ref|XP_010244051.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Nelumbo nucifera]
Length = 492
Score = 83.6 bits (205), Expect = 5e-14
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -2
Query: 212 MAQQNVVSMSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDA 33
M + NV S+S+LLRNC S I KQ HAQ+L GFLP+VTLQTDLLL+YSK L+DA
Sbjct: 1 MLRVNVGSLSSLLRNCASPSVIRQAKQAHAQVLVHGFLPNVTLQTDLLLVYSKSGRLEDA 60
Query: 32 RRVFDEMPER 3
R +FD M ER
Sbjct: 61 RCIFDGMVER 70
>ref|XP_011629072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial [Amborella trichopoda]
Length = 480
Score = 81.3 bits (199), Expect = 3e-13
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = -2
Query: 188 MSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMP 9
MS+LLRNC+PL ++N G+Q HA +L G +P+V L+TDL++MYSKC + +A++VF+ MP
Sbjct: 1 MSSLLRNCVPLGALNQGRQIHANVLINGLMPNVVLETDLIIMYSKCGSITEAQQVFESMP 60
Query: 8 ER 3
R
Sbjct: 61 HR 62
>gb|ERM96297.1| hypothetical protein AMTR_s00001p00180560 [Amborella trichopoda]
Length = 221
Score = 81.3 bits (199), Expect = 3e-13
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = -2
Query: 188 MSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMP 9
MS+LLRNC+PL ++N G+Q HA +L G +P+V L+TDL++MYSKC + +A++VF+ MP
Sbjct: 1 MSSLLRNCVPLGALNQGRQIHANVLINGLMPNVVLETDLIIMYSKCGSITEAQQVFESMP 60
Query: 8 ER 3
R
Sbjct: 61 HR 62
>ref|XP_009393799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Musa acuminata subsp. malaccensis]
gi|695013994|ref|XP_009393800.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g04780-like [Musa acuminata subsp. malaccensis]
Length = 501
Score = 76.6 bits (187), Expect = 7e-12
Identities = 35/63 (55%), Positives = 49/63 (77%)
Frame = -2
Query: 191 SMSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEM 12
S+S+ LR+C LS++ G+Q HAQ+LA G LPHVTL+TDL+L Y++C++L AR+VFD M
Sbjct: 11 SLSSRLRSCASLSALRAGQQAHAQVLAHGLLPHVTLETDLMLTYARCSNLPLARQVFDRM 70
Query: 11 PER 3
R
Sbjct: 71 RHR 73
>ref|XP_008460899.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Cucumis melo]
Length = 492
Score = 74.3 bits (181), Expect = 3e-11
Identities = 38/61 (62%), Positives = 43/61 (70%)
Frame = -2
Query: 185 SALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMPE 6
S LLR+C +I KQTHAQIL GFLPH+TL TDLLL+Y KC L DAR VFD+M
Sbjct: 11 SFLLRSCAHSYAIAQAKQTHAQILIHGFLPHLTLITDLLLVYCKCGFLHDARNVFDKMTH 70
Query: 5 R 3
R
Sbjct: 71 R 71
>ref|XP_010097008.1| hypothetical protein L484_024932 [Morus notabilis]
gi|587877600|gb|EXB66635.1| hypothetical protein
L484_024932 [Morus notabilis]
Length = 496
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = -2
Query: 212 MAQQNVVSMSALLRN-CIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDD 36
M+++ + +S+LLR+ C+ I +QTHAQ+L G L HVTLQTDLLL YSKC L D
Sbjct: 1 MSERTALHLSSLLRSSCLSPLDIFQARQTHAQVLVHGLLSHVTLQTDLLLAYSKCRFLQD 60
Query: 35 ARRVFDEM 12
AR+VFD+M
Sbjct: 61 ARQVFDKM 68
>ref|XP_011649399.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 492
Score = 72.0 bits (175), Expect = 2e-10
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = -2
Query: 185 SALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMPE 6
S +LR+C +I KQ HAQIL GFLPH+TL TDLLL+Y KC L DAR VFD+M
Sbjct: 11 SFVLRSCAQSYAIAQAKQAHAQILIHGFLPHLTLLTDLLLVYCKCGFLHDARNVFDKMAH 70
Query: 5 R 3
R
Sbjct: 71 R 71
>gb|KGN62149.1| hypothetical protein Csa_2G302160 [Cucumis sativus]
Length = 526
Score = 72.0 bits (175), Expect = 2e-10
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = -2
Query: 185 SALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMPE 6
S +LR+C +I KQ HAQIL GFLPH+TL TDLLL+Y KC L DAR VFD+M
Sbjct: 11 SFVLRSCAQSYAIAQAKQAHAQILIHGFLPHLTLLTDLLLVYCKCGFLHDARNVFDKMAH 70
Query: 5 R 3
R
Sbjct: 71 R 71
>ref|XP_011007577.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Populus euphratica]
gi|743926806|ref|XP_011007578.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Populus euphratica]
Length = 506
Score = 68.9 bits (167), Expect = 1e-09
Identities = 37/70 (52%), Positives = 45/70 (64%)
Frame = -2
Query: 212 MAQQNVVSMSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDA 33
M + +S LLRNC S I KQ +AQI+ +L +VTLQTDLLL YSK L +A
Sbjct: 1 MTYKTAYHLSILLRNCANHSLIYQVKQINAQIVLSNYLSNVTLQTDLLLAYSKSGFLQEA 60
Query: 32 RRVFDEMPER 3
R+VFD MPER
Sbjct: 61 RKVFDRMPER 70
>ref|XP_008670632.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Zea mays]
gi|551700383|gb|AGY35718.1| SMK1 [Zea mays]
Length = 506
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = -2
Query: 215 EMAQQNVVSMSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDD 36
EM + +SALLR C +++PG Q HAQ L G LP TL TDL+L+YS+C L
Sbjct: 4 EMTPPSSGRLSALLRRCAASGALSPGAQLHAQALVGGRLPDTTLDTDLVLLYSRCGALHR 63
Query: 35 ARRVFDEMP 9
AR VFD MP
Sbjct: 64 AREVFDGMP 72
>gb|ACM17537.1| putative pentatricopeptide [Oryza australiensis]
Length = 470
Score = 68.6 bits (166), Expect = 2e-09
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -2
Query: 188 MSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMP 9
+SALLR C ++ PG Q HA+ + G+LP TL+TDL+L+Y +C + ARRVFD MP
Sbjct: 9 LSALLRRCAAAGAVRPGAQAHARAVVGGWLPDATLETDLVLLYCRCGERERARRVFDRMP 68
>tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea mays]
Length = 502
Score = 67.8 bits (164), Expect = 3e-09
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -2
Query: 188 MSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMP 9
+SALLR C +++PG Q HAQ L G LP TL TDL+L+YS+C L AR VFD MP
Sbjct: 9 LSALLRRCAASGALSPGAQLHAQALVGGRLPDTTLDTDLVLLYSRCGALHRAREVFDGMP 68
>ref|XP_012087643.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Jatropha curcas]
gi|643710864|gb|KDP24783.1| hypothetical protein
JCGZ_25404 [Jatropha curcas]
Length = 494
Score = 67.0 bits (162), Expect = 5e-09
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = -2
Query: 212 MAQQNVVSMSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDA 33
M+ + V +S+ LRN + +I+P +QTHAQIL +L VTLQTDLLL YS+ L DA
Sbjct: 1 MSYKTVRHLSSPLRNSVLHYAISPARQTHAQILVNDYLTDVTLQTDLLLAYSRSGVLQDA 60
Query: 32 RRVFDEMPER 3
R+VFD M ++
Sbjct: 61 RKVFDRMCDK 70
>ref|XP_002306238.1| hypothetical protein POPTR_0005s06190g [Populus trichocarpa]
gi|222855687|gb|EEE93234.1| hypothetical protein
POPTR_0005s06190g [Populus trichocarpa]
Length = 512
Score = 66.6 bits (161), Expect = 7e-09
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = -2
Query: 212 MAQQNVVSMSALLRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDA 33
M + +S LLR+C S I KQ +AQI+ +L +VTLQTDLLL YSK L +A
Sbjct: 1 MTYKTAYHLSILLRHCANHSLIYQAKQINAQIVLSNYLSNVTLQTDLLLAYSKSGFLLEA 60
Query: 32 RRVFDEMPER 3
R+VFD MPER
Sbjct: 61 RKVFDRMPER 70
>ref|XP_011623525.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic [Amborella trichopoda]
Length = 768
Score = 64.7 bits (156), Expect = 3e-08
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Frame = -2
Query: 284 KKEIEWTIEYQPFLEDLCI*KAREM-AQQNVVSMSA-------LLRNCIPLS-SINPGKQ 132
K + W+I F ++ + +A + + NV+ +S+ LLR C PGKQ
Sbjct: 157 KNSVTWSIMVSAFSQNGFVSEALSLLSDMNVIGISSNQSVYVSLLRACSNSPRGPEPGKQ 216
Query: 131 THAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMPER 3
H+QI+ LGF+P + ++T L MY KC LD A+ +FD MPE+
Sbjct: 217 LHSQIIKLGFIPDLLIETALCNMYIKCRELDSAKLIFDNMPEK 259
>gb|ERN06163.1| hypothetical protein AMTR_s00016p00115350 [Amborella trichopoda]
Length = 396
Score = 64.7 bits (156), Expect = 3e-08
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Frame = -2
Query: 284 KKEIEWTIEYQPFLEDLCI*KAREM-AQQNVVSMSA-------LLRNCIPLS-SINPGKQ 132
K + W+I F ++ + +A + + NV+ +S+ LLR C PGKQ
Sbjct: 157 KNSVTWSIMVSAFSQNGFVSEALSLLSDMNVIGISSNQSVYVSLLRACSNSPRGPEPGKQ 216
Query: 131 THAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMPER 3
H+QI+ LGF+P + ++T L MY KC LD A+ +FD MPE+
Sbjct: 217 LHSQIIKLGFIPDLLIETALCNMYIKCRELDSAKLIFDNMPEK 259
>ref|XP_004493063.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial [Cicer arietinum]
Length = 663
Score = 64.7 bits (156), Expect = 3e-08
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = -2
Query: 176 LRNCIPLSSINPGKQTHAQILALGFLPHVTLQTDLLLMYSKCNHLDDARRVFDEMPER 3
+++C LS + GKQTH Q G+ +V + + L+ MYSKC HL+DAR++FDE+PER
Sbjct: 88 IKSCSSLSDLRAGKQTHQQAFVFGYDSNVFVASALIDMYSKCGHLNDARKLFDEIPER 145