BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00020284
         (557 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010268791.1| PREDICTED: pentatricopeptide repeat-containi...   247   2e-63
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   237   3e-60
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   237   3e-60
ref|XP_007216136.1| hypothetical protein PRUPE_ppa019108mg, part...   236   7e-60
ref|XP_009357088.1| PREDICTED: pentatricopeptide repeat-containi...   234   3e-59
ref|XP_008356170.1| PREDICTED: pentatricopeptide repeat-containi...   232   8e-59
ref|XP_010095814.1| hypothetical protein L484_022170 [Morus nota...   231   2e-58
ref|XP_012088342.1| PREDICTED: pentatricopeptide repeat-containi...   231   2e-58
ref|XP_011045469.1| PREDICTED: pentatricopeptide repeat-containi...   229   7e-58
ref|XP_002319916.2| pentatricopeptide repeat-containing family p...   229   9e-58
ref|XP_007043513.1| Pentatricopeptide repeat (PPR-like) superfam...   229   9e-58
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   228   1e-57
ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containi...   223   4e-56
ref|XP_008230272.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   223   5e-56
ref|XP_008775328.1| PREDICTED: pentatricopeptide repeat-containi...   221   2e-55
ref|XP_004248468.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   215   1e-53
emb|CDP14719.1| unnamed protein product [Coffea canephora]            215   1e-53
ref|XP_010921976.1| PREDICTED: pentatricopeptide repeat-containi...   214   2e-53
ref|XP_010556824.1| PREDICTED: pentatricopeptide repeat-containi...   213   6e-53
ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containi...   212   8e-53

>ref|XP_010268791.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Nelumbo nucifera]
          Length = 651

 Score =  247 bits (631), Expect = 2e-63
 Identities = 126/182 (69%), Positives = 144/182 (79%)
 Frame = -1

Query: 554 SKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIKS 375
           SKIL+ CK          LNST    ISIKP +YASLLQTC ++ SF  GLQI SH+IKS
Sbjct: 28  SKILFLCKSGSLLGALQLLNSTDSSEISIKPVVYASLLQTCTKAHSFNLGLQIQSHIIKS 87

Query: 374 GLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKL 195
           GL+ DRFVGNSLLS+YFKL  +FSETR VFD L ++DVISWTSM+SGY+ VGKP ESL++
Sbjct: 88  GLESDRFVGNSLLSLYFKLSADFSETRKVFDCLLVKDVISWTSMISGYLHVGKPMESLEM 147

Query: 194 FREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           F +ML+ GVEPN FTLSAAIKACSEL  L+ GRCFHGVVL R F+SN VIASALIDMYGR
Sbjct: 148 FEKMLEFGVEPNAFTLSAAIKACSELGTLKLGRCFHGVVLGRGFDSNCVIASALIDMYGR 207

Query: 14  NF 9
           NF
Sbjct: 208 NF 209



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNF--S 303
           ++PN +  ++ ++ C +  +   G   H  V+  G D +  + ++L+ MY +   NF   
Sbjct: 156 VEPNAFTLSAAIKACSELGTLKLGRCFHGVVLGRGFDSNCVIASALIDMYGR---NFYLE 212

Query: 302 ETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDS-GVEPNGFTLSAAIKAC 126
           +  ++F  +   D I WTS++S + R  + +E+L  F  M    G+ P+GFT    + AC
Sbjct: 213 DACLLFVEMPQPDAICWTSVISAFTRNDRFEEALGFFYLMQRKYGLLPDGFTFGTVLTAC 272

Query: 125 SELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
             L  ++ G+  H  V+      N V+ S+L+DMYG+
Sbjct: 273 GNLGRMKQGKEVHAKVVTAGICGNLVVESSLVDMYGK 309



 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 40/147 (27%), Positives = 80/147 (54%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ V+ +G+  +  V +SL+ MY K C    E+  VFD +
Sbjct: 265 FGTVLTACGNLGRMKQGKEVHAKVVTAGICGNLVVESSLVDMYGK-CGLVEESHKVFDRM 323

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             ++ +SW +++ GY + G  + ++K+FR M+D     + ++    ++AC+ L A+R G+
Sbjct: 324 PQKNSVSWCALLGGYCQNGDFESAIKIFR-MMDK--VDDLYSFGTVLRACAGLAAVRQGK 380

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   L      + ++ SAL+D+Y +
Sbjct: 381 EIHCQYLRMGSWRDVIVESALVDLYAK 407



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 33/147 (22%), Positives = 72/147 (48%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +   G +IH   ++ G   D  V ++L+ +Y K C        +F  +
Sbjct: 363 FGTVLRACAGLAAVRQGKEIHCQYLRMGSWRDVIVESALVDLYAK-CGFIDYAYRIFVEI 421

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             R++I+W SM+ G+ + G+ +E++ +F EM+  G+ P+  +    + ACS    +  G+
Sbjct: 422 PFRNLITWNSMICGFAQNGRGEEAIGMFNEMVKEGIIPDYISFVGVLFACSHTGLVEQGK 481

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
                +     ++     + ++D+ GR
Sbjct: 482 KHFKSMSDYGIKAGIEHYNCMVDLLGR 508


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Vitis vinifera]
          Length = 633

 Score =  237 bits (604), Expect = 3e-60
 Identities = 122/181 (67%), Positives = 139/181 (76%)
 Frame = -1

Query: 554 SKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIKS 375
           SKIL  CK          L S  P  IS KP +YASLLQTC +  +F HGLQIH+HVIKS
Sbjct: 29  SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 88

Query: 374 GLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKL 195
           GL++DRFVGNSLL++YFKL  +F ETR VFD L ++DVISWTSM+SGYVRVGKP  SL+L
Sbjct: 89  GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 148

Query: 194 FREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           F +ML  GVEPN FTLSA IKACSEL  L+ GR FHGVVL R F+SNYVIASALIDM+GR
Sbjct: 149 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR 208

Query: 14  N 12
           N
Sbjct: 209 N 209



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           ++PN +  +++++ C +      G   H  V+  G D +  + ++L+ M+ + C    + 
Sbjct: 157 VEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCA-LDDA 215

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREML-DSGVEPNGFTLSAAIKACSE 120
           R +FD L   D I WTS++S   R     E+L+ F  M  D G+ P+GFT    + AC  
Sbjct: 216 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 275

Query: 119 LEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           L  L+ G+  H  V+   F  N V+ S+L+DMYG+
Sbjct: 276 LGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGK 310



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKL-CPNFSETRMVFDN 279
           + ++L+TC    +   G ++H   I+ G   D  V ++L+ +Y K  C  +++T  +FD 
Sbjct: 363 FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQT--IFDQ 420

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           + +R++I+W SM+ G+ + G+ +E+L++F +M+  G++P+  +    + ACS    +  G
Sbjct: 421 MPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEG 480

Query: 98  RCFHGVVLVRRFESNYVIA--SALIDMYGR 15
           R +  + + + +     I   S ++D+ GR
Sbjct: 481 REYF-ISMTKDYGIKVGIEHYSCMVDLLGR 509



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 38/147 (25%), Positives = 81/147 (55%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI +G   +  V +SL+ MY K C +  E++ +FD +
Sbjct: 266 FGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGK-CGSVGESQRIFDRM 324

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            I++ +SW++++ GY + G  K  +++FR+M     + + +     ++ C+ L A+R G+
Sbjct: 325 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGK 380

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + +    + ++ SAL+D+Y +
Sbjct: 381 EVHCQYIRKGGWRDVIVESALVDLYAK 407


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  237 bits (604), Expect = 3e-60
 Identities = 122/181 (67%), Positives = 139/181 (76%)
 Frame = -1

Query: 554 SKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIKS 375
           SKIL  CK          L S  P  IS KP +YASLLQTC +  +F HGLQIH+HVIKS
Sbjct: 88  SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 147

Query: 374 GLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKL 195
           GL++DRFVGNSLL++YFKL  +F ETR VFD L ++DVISWTSM+SGYVRVGKP  SL+L
Sbjct: 148 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 207

Query: 194 FREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           F +ML  GVEPN FTLSA IKACSEL  L+ GR FHGVVL R F+SNYVIASALIDM+GR
Sbjct: 208 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR 267

Query: 14  N 12
           N
Sbjct: 268 N 268



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           ++PN +  +++++ C +      G   H  V+  G D +  + ++L+ M+ + C    + 
Sbjct: 216 VEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCA-LDDA 274

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREML-DSGVEPNGFTLSAAIKACSE 120
           R +FD L   D I WTS++S   R     E+L+ F  M  D G+ P+GFT    + AC  
Sbjct: 275 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 334

Query: 119 LEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           L  L+ G+  H  V+   F  N V+ S+L+DMYG+
Sbjct: 335 LGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGK 369



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKL-CPNFSETRMVFDN 279
           + ++L+TC    +   G ++H   I+ G   D  V ++L+ +Y K  C  +++T  +FD 
Sbjct: 422 FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQT--IFDQ 479

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           + +R++I+W SM+ G+ + G+ +E+L++F +M+  G++P+  +    + ACS    +  G
Sbjct: 480 MPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEG 539

Query: 98  RCFHGVVLVRRFESNYVIA--SALIDMYGR 15
           R +  + + + +     I   S ++D+ GR
Sbjct: 540 REYF-ISMTKDYGIKVGIEHYSCMVDLLGR 568



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 38/147 (25%), Positives = 81/147 (55%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI +G   +  V +SL+ MY K C +  E++ +FD +
Sbjct: 325 FGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGK-CGSVGESQRIFDRM 383

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            I++ +SW++++ GY + G  K  +++FR+M     + + +     ++ C+ L A+R G+
Sbjct: 384 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGK 439

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + +    + ++ SAL+D+Y +
Sbjct: 440 EVHCQYIRKGGWRDVIVESALVDLYAK 466


>ref|XP_007216136.1| hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica]
           gi|462412286|gb|EMJ17335.1| hypothetical protein
           PRUPE_ppa019108mg, partial [Prunus persica]
          Length = 608

 Score =  236 bits (601), Expect = 7e-60
 Identities = 115/185 (62%), Positives = 142/185 (76%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           QS+IL  CK          LNS     I++KP +YASLLQTC ++ SF HGLQIH+HV+K
Sbjct: 27  QSQILRLCKLGLLSDAIRVLNSIDSGEITLKPILYASLLQTCTKAVSFNHGLQIHAHVVK 86

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           SGL+ DRFVGNSLLS+YFKL PN SETR VFD L ++DVISWTSM++GYVR GKP  S++
Sbjct: 87  SGLETDRFVGNSLLSLYFKLVPNMSETRRVFDGLFVKDVISWTSMITGYVRAGKPGNSIE 146

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
           +F +ML  G+EPN FTLSA +KACSE+  LR G CFHGVV+ R F SN+VI SALI+MYG
Sbjct: 147 VFYDMLKFGIEPNAFTLSAVVKACSEIGDLRLGLCFHGVVVRRGFVSNHVIISALINMYG 206

Query: 17  RNFKA 3
           RN+++
Sbjct: 207 RNYRS 211



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           I+PN +  +++++ C +      GL  H  V++ G   +  + ++L++MY +   +  + 
Sbjct: 156 IEPNAFTLSAVVKACSEIGDLRLGLCFHGVVVRRGFVSNHVIISALINMYGRNYRS-EDA 214

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREMLD-SGVEPNGFTLSAAIKACSE 120
           R++FD L     I WTS++S   R    +E+L  F  M    G+ P+GFT    + AC  
Sbjct: 215 RLLFDELTEPGAICWTSIISALTRSDLFEEALGFFYLMHRYHGLSPDGFTFGTVLAACGN 274

Query: 119 LEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           L  LR GR  H  V+      N V+ S+L+DMYG+
Sbjct: 275 LGRLRQGREMHAKVITYGLCGNVVVESSLVDMYGK 309



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 38/147 (25%), Positives = 77/147 (52%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI  GL  +  V +SL+ MY K C +    R VFD +
Sbjct: 265 FGTVLAACGNLGRLRQGREMHAKVITYGLCGNVVVESSLVDMYGK-CGSVECARRVFDRI 323

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             ++ +SW++++  Y + G  +  +  FREM ++ +    ++    ++AC+ L A++ G+
Sbjct: 324 PKKNSVSWSALLGVYCQTGDFESVINHFREMEEADL----YSFGTVLRACAGLAAVQQGK 379

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + R    + ++ SAL+ +Y +
Sbjct: 380 EVHCQYVRRCGWRDVIVESALVHLYAK 406



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 32/120 (26%), Positives = 62/120 (51%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +   G ++H   ++     D  V ++L+ +Y K C      R VF  +
Sbjct: 362 FGTVLRACAGLAAVQQGKEVHCQYVRRCGWRDVIVESALVHLYAK-CGCIDFARRVFTQM 420

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R++I+W SM+ G+ + G   E+L++F  M+  GV+P+  +    + ACS    +  GR
Sbjct: 421 PVRNLITWNSMICGFAQNGGGAEALRIFDRMIKEGVKPDYISFIGVLFACSHAGLVDQGR 480


>ref|XP_009357088.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Pyrus x bretschneideri]
          Length = 628

 Score =  234 bits (596), Expect = 3e-59
 Identities = 115/185 (62%), Positives = 139/185 (75%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           QSKIL  CK          LNS     I++KP +YASLLQTC +  SF HGLQ+H+HV+K
Sbjct: 27  QSKILQLCKLGLLSDAIRVLNSIDSGEITLKPILYASLLQTCTKVVSFNHGLQVHAHVVK 86

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           SGL+ DRFVGNSLL++YFKL PN SETR VFD L ++DVISWTSM++GYVR GKP  S++
Sbjct: 87  SGLETDRFVGNSLLALYFKLVPNMSETRRVFDGLFVKDVISWTSMITGYVRAGKPGNSIE 146

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
           +F EML  G+EPN FTLSA +KACSE+  LR G CFHGVV  R F+SN VI SALI MYG
Sbjct: 147 MFWEMLKFGIEPNAFTLSAVVKACSEVGDLRLGLCFHGVVFRRGFDSNDVIVSALIYMYG 206

Query: 17  RNFKA 3
           RN+++
Sbjct: 207 RNYRS 211



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           I+PN +  +++++ C +      GL  H  V + G D +  + ++L+ MY +   +  + 
Sbjct: 156 IEPNAFTLSAVVKACSEVGDLRLGLCFHGVVFRRGFDSNDVIVSALIYMYGRNYRS-EDA 214

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREML-DSGVEPNGFTLSAAIKACSE 120
           R +FD +     I WTS++S + R    +E+L  F  M  + G+ P+GFT    + AC  
Sbjct: 215 RRLFDEMSEPGAICWTSVISAFTRSDLFEEALGFFYLMQRNHGLSPDGFTFGTVLTACGN 274

Query: 119 LEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           L  LR GR  H  V+      N V+ S+L+DMYG+
Sbjct: 275 LGRLRQGREVHAKVITYGLYGNVVVESSLVDMYGK 309



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 36/120 (30%), Positives = 68/120 (56%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +  HG ++H   ++S    D  V ++L+++Y K C N    R VF  +
Sbjct: 362 FGTVLRACAGLAAVQHGKEVHCQYVRSCGWRDVIVESALVNLYAK-CGNIDFARRVFVKM 420

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R++I+W SM+ G+ + G  +E+LK+F EM++ G+ P+  +    + ACS    +  GR
Sbjct: 421 PVRNLITWNSMICGFAQNGGGEEALKIFDEMINDGIRPDYISFIGVLFACSHAGLVDQGR 480



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 38/147 (25%), Positives = 78/147 (53%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI  GL  +  V +SL+ MY K C +    R VFD +
Sbjct: 265 FGTVLTACGNLGRLRQGREVHAKVITYGLYGNVVVESSLVDMYGK-CGSVENARRVFDRM 323

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             ++ +SW++++  Y + G  +  +K FREM ++ +    ++    ++AC+ L A++ G+
Sbjct: 324 SKKNSVSWSALLGVYCQAGDFESVVKHFREMEETDL----YSFGTVLRACAGLAAVQHGK 379

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   +      + ++ SAL+++Y +
Sbjct: 380 EVHCQYVRSCGWRDVIVESALVNLYAK 406


>ref|XP_008356170.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Malus domestica]
          Length = 652

 Score =  232 bits (592), Expect = 8e-59
 Identities = 115/185 (62%), Positives = 138/185 (74%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           QSKIL  CK          LNS     I++KP +YASLLQTC ++ SF HGLQ+H+HV+K
Sbjct: 51  QSKILQLCKLGLLPDAIRVLNSIDSGEITLKPILYASLLQTCTKAVSFNHGLQVHAHVVK 110

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           SGL+ DRFVGNSLL++YFKL PN SETR VFD L ++DVISWTSM++GYVR GKP  S++
Sbjct: 111 SGLETDRFVGNSLLALYFKLVPNMSETRRVFDGLFVKDVISWTSMITGYVRAGKPGNSIE 170

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
            F EML  G+EPN FTLSA +KACSE+  LR G CFHGVV  R F+SN VI SALI MYG
Sbjct: 171 TFWEMLKFGIEPNAFTLSAVVKACSEIGDLRLGLCFHGVVFRRGFDSNDVIVSALIYMYG 230

Query: 17  RNFKA 3
           RN ++
Sbjct: 231 RNCRS 235



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           I+PN +  +++++ C +      GL  H  V + G D +  + ++L+ MY + C +  + 
Sbjct: 180 IEPNAFTLSAVVKACSEIGDLRLGLCFHGVVFRRGFDSNDVIVSALIYMYGRNCRS-EDA 238

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREML-DSGVEPNGFTLSAAIKACSE 120
           R +FD +     I WTS++S + R    +E+L  F  M  + G+ P+GFT    + AC  
Sbjct: 239 RRLFDEMSEPGPICWTSVISAFTRSDLFEEALGFFYLMQRNHGLSPDGFTFGTVLTACGN 298

Query: 119 LEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           L  LR GR  H  V+      N V+ S+L+DMYG+
Sbjct: 299 LGRLRQGREVHAKVITYGLYGNVVVESSLVDMYGK 333



 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 39/148 (26%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +  HG ++H   ++     D  V ++L+++Y K C N    R VF  +
Sbjct: 386 FGTVLRACAGLAAVQHGKEVHCQYVRRCGWRDVIVESALVNLYAK-CGNIDFARRVFVKM 444

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R++I+W SM+ G+ + G  +E+LK+F EM++ G++P+  +    + ACS    +  GR
Sbjct: 445 PVRNLITWNSMICGFAQNGGGEEALKIFDEMINEGIKPDYISFIGVLFACSHAGLVDQGR 504

Query: 95  C-FHGVVLVRRFESNYVIASALIDMYGR 15
             F  +    R +        ++++ GR
Sbjct: 505 SNFIAMTKDYRIKPGIEHYCCMVBLLGR 532



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 37/147 (25%), Positives = 77/147 (52%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI  GL  +  V +SL+ MY K C +      VFD +
Sbjct: 289 FGTVLTACGNLGRLRQGREVHAKVITYGLYGNVVVESSLVDMYGK-CGSVENAXRVFDRM 347

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             ++ +S ++++  Y + G  +  +K FREM ++ +    ++    ++AC+ L A++ G+
Sbjct: 348 SKKNSVSRSALLGVYCQAGDFESVVKHFREMEEADL----YSFGTVLRACAGLAAVQHGK 403

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + R    + ++ SAL+++Y +
Sbjct: 404 EVHCQYVRRCGWRDVIVESALVNLYAK 430


>ref|XP_010095814.1| hypothetical protein L484_022170 [Morus notabilis]
           gi|587873080|gb|EXB62282.1| hypothetical protein
           L484_022170 [Morus notabilis]
          Length = 633

 Score =  231 bits (589), Expect = 2e-58
 Identities = 115/182 (63%), Positives = 139/182 (76%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           +S+I   CK          LNS  P  I++KP +YASLLQTCV++ SF  GLQIH+HV+K
Sbjct: 28  ESQIRQLCKFGALSDAFSVLNSIDPGEITVKPTLYASLLQTCVKAVSFKPGLQIHAHVVK 87

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           SGL+ DRFVGNSLL++YFKL  + S+TR VFDNL  +DVISWTSMVSGYV+VGKP+  + 
Sbjct: 88  SGLETDRFVGNSLLALYFKLGSDISQTRRVFDNLNFKDVISWTSMVSGYVKVGKPENGIS 147

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
           LFREM   GVEPNGFTLSA IKACSE+  LR GRCFH +V+   F+SN+VI S+LIDMYG
Sbjct: 148 LFREMYGFGVEPNGFTLSAVIKACSEIPDLRLGRCFHTMVVKCGFDSNHVIVSSLIDMYG 207

Query: 17  RN 12
           RN
Sbjct: 208 RN 209



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           ++PN +  +++++ C +      G   H+ V+K G D +  + +SL+ MY +   N  E 
Sbjct: 157 VEPNGFTLSAVIKACSEIPDLRLGRCFHTMVVKCGFDSNHVIVSSLIDMYGR--NNVPED 214

Query: 296 RM-VFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREML-DSGVEPNGFTLSAAIKACS 123
              +FD +   D I WTS++S   R     ++L LF  M   +G   +G+T    + AC 
Sbjct: 215 ACKLFDEMIDPDAICWTSVISAMTRNDSFVKALGLFYSMQRKAGFFADGYTFGTVLTACG 274

Query: 122 ELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
            L  LR G+  H  V+   F  N ++ S+L+DMYG+
Sbjct: 275 NLGRLRQGKEVHSKVITCGFCGNVIVESSLVDMYGK 310



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 43/147 (29%), Positives = 77/147 (52%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++HS VI  G   +  V +SL+ MY K C +  + R VFD +
Sbjct: 266 FGTVLTACGNLGRLRQGKEVHSKVITCGFCGNVIVESSLVDMYGK-CGSVVDARGVFDRM 324

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +++ +SWT+++  Y + G+    ++LFREM    +    +     I+AC+ L A R G+
Sbjct: 325 TVKNSVSWTALLGVYCQNGEFGYVIELFREMEKDDL----YCFGTVIRACAGLAAARHGK 380

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + +    N ++ SAL+D+Y +
Sbjct: 381 EVHCQYVRKGSSRNVIVESALVDLYAK 407



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 36/150 (24%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKL-CPNFSETRMVFDN 279
           + ++++ C    +  HG ++H   ++ G   +  V ++L+ +Y K  C NF+E   VF  
Sbjct: 363 FGTVIRACAGLAAARHGKEVHCQYVRKGSSRNVIVESALVDLYAKCGCINFAER--VFCR 420

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           + +R++I+W SM+ G+ + G+  E++ +F +M+  G++P+  +    + ACS    +  G
Sbjct: 421 MPVRNLITWNSMICGFAQNGRGGEAIGVFDQMIKEGIKPDYISFVGVLFACSHSGLVERG 480

Query: 98  R-CFHGVVLVRRFESNYVIASALIDMYGRN 12
           R  F  +      ++ +   + ++D+ GR+
Sbjct: 481 RNFFKSMTAEYGIKAGHEHYNCMVDLLGRS 510


>ref|XP_012088342.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Jatropha curcas] gi|643709770|gb|KDP24179.1|
           hypothetical protein JCGZ_25836 [Jatropha curcas]
          Length = 604

 Score =  231 bits (589), Expect = 2e-58
 Identities = 112/181 (61%), Positives = 140/181 (77%)
 Frame = -1

Query: 551 KILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIKSG 372
           +I+ +CK          LNS     +  KP +YASLLQTC +  SF HGLQIH+H+IKSG
Sbjct: 31  RIIQYCKSGALFDALHILNSLDSAKLCNKPFLYASLLQTCTKVVSFNHGLQIHAHLIKSG 90

Query: 371 LDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLF 192
           L+ DRF+GNSLL++YFKL  NF ETR +FD L  RDVISWTSMV+GY++VGKPK +++LF
Sbjct: 91  LETDRFIGNSLLALYFKLGSNFFETRRLFDGLYFRDVISWTSMVTGYIKVGKPKNAIELF 150

Query: 191 REMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGRN 12
            EMLD G++PNGFTLSAAIKA S+L  LR G+C HGVV+ + F+SNYVI+SALIDMYGRN
Sbjct: 151 LEMLDFGIDPNGFTLSAAIKASSDLGNLRLGKCIHGVVISQGFDSNYVISSALIDMYGRN 210

Query: 11  F 9
           +
Sbjct: 211 Y 211



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 43/147 (29%), Positives = 82/147 (55%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI SG   +  V +SL+ MY K C    E++ VFD +
Sbjct: 267 FGTVLTACGNLRRLKRGKEVHARVITSGFSGNVVVESSLVDMYGK-CGLVMESQHVFDRM 325

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            I++ +SW++++ GY + G  +  +++FRE+    +    ++    ++ACS L A+R G+
Sbjct: 326 SIKNSVSWSALLGGYCQNGDFESVIRIFREVESHDL----YSFGTVLRACSGLAAIRQGK 381

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             HG  + R    + ++ SAL+D+Y +
Sbjct: 382 EVHGQYVRRGGWRDVIVESALVDLYAK 408



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
 Frame = -1

Query: 407 GLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYV 228
           G  IH  VI  G D +  + ++L+ MY +      +   +FD+L   D ISWTS++S + 
Sbjct: 181 GKCIHGVVISQGFDSNYVISSALIDMYGRNY-GLEDACRLFDDLLEPDAISWTSVISAFT 239

Query: 227 RVGKPKESLKLFREMLDS-GVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNY 51
           R     ++L  F  M    G+ P+ FT    + AC  L  L+ G+  H  V+   F  N 
Sbjct: 240 RNDMYDKALGFFYLMQRKLGLAPDEFTFGTVLTACGNLRRLKRGKEVHARVITSGFSGNV 299

Query: 50  VIASALIDMYGR 15
           V+ S+L+DMYG+
Sbjct: 300 VVESSLVDMYGK 311



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 38/149 (25%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +   G ++H   ++ G   D  V ++L+ +Y K C        +F  +
Sbjct: 364 FGTVLRACSGLAAIRQGKEVHGQYVRRGGWRDVIVESALVDLYAK-CGCIDFAHRIFSKM 422

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R++I+W SM+ G+ + G+ +E+L++F EML  G++P+  +    + ACS    +  GR
Sbjct: 423 SVRNLITWNSMIYGFAQNGRGEEALRIFNEMLGEGIKPDYISYIGVLFACSHTGLVDQGR 482

Query: 95  CFHGVVLVRRFESNYVIA--SALIDMYGR 15
            F  + + + +E    I   + ++D+ GR
Sbjct: 483 KFF-MSMTKEYEIKPGIEHYNCMVDLLGR 510


>ref|XP_011045469.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Populus euphratica]
          Length = 606

 Score =  229 bits (584), Expect = 7e-58
 Identities = 115/180 (63%), Positives = 137/180 (76%)
 Frame = -1

Query: 551 KILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIKSG 372
           KI+ +CK          LNS     +S KP  YASLLQTC ++ SFTHG+Q H+HVIKSG
Sbjct: 31  KIIQYCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHAHVIKSG 90

Query: 371 LDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLF 192
           LD DRFVGNSLL++YFKL PN  E R VFD L  +D+ISWTSM++GYV+V KPK+SL+LF
Sbjct: 91  LDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELF 150

Query: 191 REMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGRN 12
            EML  G+EPNGFTLSA IKACS L  LR G+CFHGVV+VR F+ N VI++ALIDMYGRN
Sbjct: 151 LEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRN 210



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/147 (29%), Positives = 83/147 (56%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI SGL  + FV +SL+ MY K C   ++++ VFD +
Sbjct: 267 FGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGK-CRLVNQSQRVFDRM 325

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +++++SWT+++ GY + G  +  +++FRE    G   + ++    ++AC+ L A+R  +
Sbjct: 326 SVKNLVSWTALLGGYCQNGDFESVIRIFRE----GKGVDTYSFGTVLRACAGLAAVRQVK 381

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + R    + V  SAL+D+Y +
Sbjct: 382 EVHFQYVKRCCWRDVVTESALVDLYAK 408



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
 Frame = -1

Query: 476 ISIKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFS 303
           + I+PN +  +++++ C        G   H  V+  G D +  +  +L+ MY +      
Sbjct: 156 LGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSA-VD 214

Query: 302 ETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDS-GVEPNGFTLSAAIKAC 126
           +  +VF  L   D I WTS++S + R     ++L  F  M    G+ P+GFT    + AC
Sbjct: 215 DASLVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTAC 274

Query: 125 SELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
             L  L+ G+  H  V+      N  + S+L+DMYG+
Sbjct: 275 GNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGK 311



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +     ++H   +K     D    ++L+ +Y K C        +F  +
Sbjct: 364 FGTVLRACAGLAAVRQVKEVHFQYVKRCCWRDVVTESALVDLYAK-CGCIDFAYRIFVRM 422

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG- 99
            +R++I+W SM+ G+ + G+  E  +LF EM++ G+ P+  +    + ACS    +  G 
Sbjct: 423 SVRNLITWNSMIYGFAQNGRCGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGK 482

Query: 98  RCFHGVVLVRRFESNYVIASALIDMYGR 15
           + F  +  +   +      + +ID+ GR
Sbjct: 483 KYFAAMTELYEIKPGIEHYNCMIDLLGR 510


>ref|XP_002319916.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550325822|gb|EEE95839.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 606

 Score =  229 bits (583), Expect = 9e-58
 Identities = 115/180 (63%), Positives = 136/180 (75%)
 Frame = -1

Query: 551 KILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIKSG 372
           KI+ +CK          LNS     +S KP  YASLLQTC ++ SFTHG+Q HSH IKSG
Sbjct: 31  KIIQYCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSG 90

Query: 371 LDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLF 192
           LD DRFVGNSLL++YFKL PN  E R VFD L  +D+ISWTSM++GYV+V KPK+SL+LF
Sbjct: 91  LDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELF 150

Query: 191 REMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGRN 12
            EML  G+EPNGFTLSA IKACS L  LR G+CFHGVV+VR F+ N VI++ALIDMYGRN
Sbjct: 151 LEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRN 210



 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 44/147 (29%), Positives = 85/147 (57%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI SGL  + FV +SL+ MY K C   ++++ VFD +
Sbjct: 267 FGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGK-CRLVNQSQCVFDRM 325

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +++++SWT+++ GY + G  +  +++FRE    G + + ++    ++AC+ L A+R G+
Sbjct: 326 SVKNLVSWTALLGGYCQNGDFESVIRIFRE----GKKVDTYSFGTVLRACAGLAAVRQGK 381

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + R    + V  SAL+D+Y +
Sbjct: 382 EVHCQYVKRCCWRDVVTESALVDLYAK 408



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
 Frame = -1

Query: 476 ISIKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFS 303
           + I+PN +  +++++ C        G   H  V+  G D +  +  +L+ MY +      
Sbjct: 156 LGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSA-VD 214

Query: 302 ETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDS-GVEPNGFTLSAAIKAC 126
           +  +VF  L   D I WTS++S + R     ++L  F  M    G+ P+GFT    + AC
Sbjct: 215 DAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTAC 274

Query: 125 SELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
             L  L+ G+  H  V+      N  + S+L+DMYG+
Sbjct: 275 GNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGK 311



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKL-CPNFSETRMVFDN 279
           + ++L+ C    +   G ++H   +K     D    ++L+ +Y K  C +F++   +F  
Sbjct: 364 FGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFADR--IFVR 421

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           + +R++I+W SM+ G+ + G+  E  +LF EM++ G+ P+  +    + ACS    +  G
Sbjct: 422 MSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQG 481

Query: 98  -RCFHGVVLVRRFESNYVIASALIDMYGR 15
            + F  +  V   +      + +ID+ GR
Sbjct: 482 KKYFAAMTEVYEIKPGIEHYNCMIDLLGR 510


>ref|XP_007043513.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508707448|gb|EOX99344.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 638

 Score =  229 bits (583), Expect = 9e-58
 Identities = 119/186 (63%), Positives = 140/186 (75%), Gaps = 3/186 (1%)
 Frame = -1

Query: 554 SKILYFCKXXXXXXXXXXLNST---SPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHV 384
           S+IL+FCK          LN+    S  + S KP +YASLLQTC    SF+HGLQ H+HV
Sbjct: 32  SQILHFCKSAQLFPAIHLLNTLHFPSETTSSKKPLLYASLLQTCTNVQSFSHGLQFHAHV 91

Query: 383 IKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKES 204
           IKSGL  DRFVGNSLL++YFKL P+F+ETR VFD L ++DVISWTSMVSGY++ GKP+ S
Sbjct: 92  IKSGLQTDRFVGNSLLALYFKLGPDFTETRRVFDGLFVKDVISWTSMVSGYIKAGKPESS 151

Query: 203 LKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDM 24
           L+LF EML  GVEPNGFTLS  IKACSEL  LR G CFHGVV+ R F SN VI+SALID 
Sbjct: 152 LQLFWEMLGFGVEPNGFTLSTVIKACSELGKLRLGWCFHGVVIKRGFVSNRVISSALIDF 211

Query: 23  YGRNFK 6
           YGRN++
Sbjct: 212 YGRNWQ 217



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           ++PN +  +++++ C +      G   H  VIK G   +R + ++L+  Y +      E 
Sbjct: 163 VEPNGFTLSTVIKACSELGKLRLGWCFHGVVIKRGFVSNRVISSALIDFYGRNW-QLKEA 221

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREM-LDSGVEPNGFTLSAAIKACSE 120
             +FD L   D I WTS++S   R    +E+L+ F  M  + G+ P+GFT    + AC  
Sbjct: 222 CEIFDELPEPDAICWTSVISALTRNDLYEEALRFFYLMHRNHGLSPDGFTFGTVLTACGN 281

Query: 119 LEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           L  LR G+  H  V+      N V+ S+L+DMYG+
Sbjct: 282 LGRLRQGKQVHAKVITCGLCGNVVVESSLLDMYGK 316



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 41/147 (27%), Positives = 78/147 (53%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G Q+H+ VI  GL  +  V +SLL MY K C    E++ VFD +
Sbjct: 272 FGTVLTACGNLGRLRQGKQVHAKVITCGLCGNVVVESSLLDMYGK-CGLVDESQCVFDRM 330

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             ++ +SW++++  Y +    +  +++FREM  + +    +     ++AC+ L A+R G+
Sbjct: 331 SKKNSVSWSALLGVYCQNKDYESVIRIFREMDKTDL----YCFGTVLRACAGLAAVRQGK 386

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + R    + ++ SAL+D+Y +
Sbjct: 387 EVHCQYVRRGGWRDVIVESALVDLYAK 413



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKL-CPNFSETRMVFDN 279
           + ++L+ C    +   G ++H   ++ G   D  V ++L+ +Y K  C +F+    +F  
Sbjct: 369 FGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIVESALVDLYAKCGCIHFAHR--IFVQ 426

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           +  R++I+W SM+ G+ + G   E+L++F EM+  G++P+  +    + ACS    +  G
Sbjct: 427 MSSRNLITWNSMIYGFAQNGLGGEALRIFDEMI-KGIKPDYISFIGVLFACSHTGLVDQG 485

Query: 98  RCFHGVVLVRRFESNYVIA--SALIDMYGR 15
           R +   ++ R +     I   + ++D+ GR
Sbjct: 486 RKYF-ALMTREYGIKPGIEHYNCMVDLLGR 514


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  228 bits (581), Expect = 1e-57
 Identities = 113/182 (62%), Positives = 138/182 (75%)
 Frame = -1

Query: 551 KILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIKSG 372
           KI+ FCK          LNS   + IS KP IYASLLQTC +  SF HGLQIH+HV+KSG
Sbjct: 22  KIIGFCKSGALLHALDILNSIDSREISNKPFIYASLLQTCTKVVSFNHGLQIHAHVVKSG 81

Query: 371 LDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLF 192
           L+ DRFVGNSLL++YFKL  +F ETR VFD L  RDVISWTSM++GYV+  KPK++L LF
Sbjct: 82  LETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWTSMITGYVKGEKPKKALDLF 141

Query: 191 REMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGRN 12
            EMLD GV+PN FTLSA IKAC++L  L  G+CFH V+++R F SN+VI SALID+YGRN
Sbjct: 142 WEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRN 201

Query: 11  FK 6
           ++
Sbjct: 202 YE 203



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
 Frame = -1

Query: 476 ISIKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFS 303
           + + PN +  +++++ C    +   G   H  ++  G   +  +G++L+ +Y +      
Sbjct: 147 VGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRNY-ELD 205

Query: 302 ETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDS-GVEPNGFTLSAAIKAC 126
           + R +FD L   D I WTS++S Y R     ++L  F  M    G+ P+GFT    + AC
Sbjct: 206 DARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTAC 265

Query: 125 SELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
             L  L+ G+  H  ++   F  N V+ S+L+DMYG+
Sbjct: 266 GNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGK 302



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 41/147 (27%), Positives = 82/147 (55%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ +I SG   +  V +SL+ MY K C    E++ VFD +
Sbjct: 258 FGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGK-CGLVDESQRVFDRM 316

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +++ +SW++++ G+ + G  +  +++FREM   G   + ++    ++AC+ L A+R G+
Sbjct: 317 SVKNSVSWSALLGGFCQNGDFESVIRIFREM---GEADDLYSFGTVLRACAGLAAVRQGK 373

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + R    + +I SAL+D+Y +
Sbjct: 374 EVHCQYVRRGGWRDVIIESALVDLYAK 400



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/114 (25%), Positives = 61/114 (53%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +   G ++H   ++ G   D  + ++L+ +Y K C        +F  +
Sbjct: 356 FGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAK-CGCIDFAHRIFTKM 414

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELE 114
            +R++I+W SM+ G+ + G  +E+L++F EM+  G +P+  T    + ACS  +
Sbjct: 415 TVRNLITWNSMICGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFACSHTD 468


>ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Fragaria vesca subsp. vesca]
          Length = 658

 Score =  223 bits (569), Expect = 4e-56
 Identities = 110/184 (59%), Positives = 139/184 (75%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           QS+IL  CK          LNST+P  +++KP +YASLLQTC ++ S THGLQIHSHVIK
Sbjct: 29  QSQILRLCKSGLLLDAIHLLNSTNPSKLTLKPLLYASLLQTCTKAVSLTHGLQIHSHVIK 88

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           +GL+ DRFVGNSLLS+YFKL PN ++T+ VFD L  +DVISWTSM++GYVR GKP  S++
Sbjct: 89  TGLETDRFVGNSLLSLYFKLIPNMTQTQKVFDALYFKDVISWTSMITGYVRAGKPATSVE 148

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
           LF EM+  G+EPN FT+SA +KACS+L  +  GRC H +V+ R  +SN VI SALIDMYG
Sbjct: 149 LFWEMVRFGIEPNDFTVSAVVKACSQLGRVSLGRCLHCLVVSRGCDSNPVIISALIDMYG 208

Query: 17  RNFK 6
           RN +
Sbjct: 209 RNHR 212



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           I+PN +  +++++ C Q    + G  +H  V+  G D +  + ++L+ MY +      + 
Sbjct: 158 IEPNDFTVSAVVKACSQLGRVSLGRCLHCLVVSRGCDSNPVIISALIDMYGRN-HRPGDA 216

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDS-GVEPNGFTLSAAIKACSE 120
           R +FD +     I WTS++S   R    +E+L  F  M    G+ P+GFT    + AC  
Sbjct: 217 RQLFDEMREPGAICWTSVISALTRSDLFREALGYFYLMQRCHGLFPDGFTFGTVLTACGN 276

Query: 119 LEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           LE LR GR  H  V+    + N V+ S+L+DMYG+
Sbjct: 277 LERLRQGREVHAKVVTYGIKGNVVVESSLVDMYGK 311



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 37/147 (25%), Positives = 82/147 (55%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ V+  G+  +  V +SL+ MY K C +  ++R VFD +
Sbjct: 267 FGTVLTACGNLERLRQGREVHAKVVTYGIKGNVVVESSLVDMYGK-CGSVDDSRRVFDRM 325

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +++ +SW++++  Y + G+ +  +K FREM ++ +    +     ++AC+ L A++ G+
Sbjct: 326 AVKNSVSWSALLGVYCQAGEFESVIKNFREMEEADL----YCFGTVLRACAGLAAVQHGK 381

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + R    + ++ SAL+++Y +
Sbjct: 382 EVHCQYVRRCGWRDVIVESALVNLYAK 408



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/121 (28%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKL-CPNFSETRMVFDN 279
           + ++L+ C    +  HG ++H   ++     D  V ++L+++Y K  C +F+ +  VF  
Sbjct: 364 FGTVLRACAGLAAVQHGKEVHCQYVRRCGWRDVIVESALVNLYAKCGCIDFASS--VFAQ 421

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           + +R++I+W SM+ G+ + G+ +E+LK+F EM+  G++P+  +    + ACS    +  G
Sbjct: 422 MLVRNLITWNSMICGFAQNGQGEEALKIFDEMIKEGMKPDYISFIGVLFACSHAGLVDQG 481

Query: 98  R 96
           R
Sbjct: 482 R 482


>ref|XP_008230272.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g03540 [Prunus mume]
          Length = 620

 Score =  223 bits (568), Expect = 5e-56
 Identities = 110/179 (61%), Positives = 134/179 (74%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           QS+IL  CK          LN+     I++KP +YASLLQTC  + SF HGLQIH+HV+K
Sbjct: 27  QSQILRLCKLGLLSDAIRVLNAIDSGEITLKPILYASLLQTCTNAVSFNHGLQIHAHVVK 86

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           SGL+ DRFVGNSLLS+YFKL PN SETR VFD L ++DVISWTSM++GYVR GKP  S++
Sbjct: 87  SGLETDRFVGNSLLSLYFKLVPNMSETRKVFDGLFVKDVISWTSMITGYVRAGKPGNSIE 146

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMY 21
           +F +ML  G+EPN FTLSA +KACSE+  L  G CFHGVV+ R F SN+VI SALI+MY
Sbjct: 147 VFYDMLKFGIEPNAFTLSAVVKACSEIGDLMLGLCFHGVVVRRGFVSNHVIISALINMY 205



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           I+PN +  +++++ C +      GL  H  V++ G   +  + ++L++MY          
Sbjct: 156 IEPNAFTLSAVVKACSEIGDLMLGLCFHGVVVRRGFVSNHVIISALINMYX--------- 206

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREMLD-SGVEPNGFTLSAAIKACSE 120
               D L     I WTS++S + R    +E+L  F  M    G+ P+GFT    + AC  
Sbjct: 207 ----DELTEPGAICWTSVISAFTRSDLFEEALGFFYLMHRYHGLSPDGFTFGTVLAACGN 262

Query: 119 LEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
           L  LR G   H  V+      N V+ S+L+DMYG+
Sbjct: 263 LGRLRQGGEMHAKVITYGLCGNVVVESSLVDMYGK 297



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 38/147 (25%), Positives = 79/147 (53%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L  C        G ++H+ VI  GL  +  V +SL+ MY K C +    + VFD +
Sbjct: 253 FGTVLAACGNLGRLRQGGEMHAKVITYGLCGNVVVESSLVDMYGK-CGSVEYAQRVFDRI 311

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             ++ +SW++++  Y + G  +  +K FREM ++ +    ++    ++AC+ L A++ G+
Sbjct: 312 PKKNSVSWSALLGVYCQTGDFESVIKHFREMEEADL----YSFGTVLRACAGLAAVQQGK 367

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   + R    + ++ SAL+++Y +
Sbjct: 368 EVHCQYVRRCGWRDVIVESALVNLYAK 394



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 32/120 (26%), Positives = 63/120 (52%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +   G ++H   ++     D  V ++L+++Y K C      R VF  +
Sbjct: 350 FGTVLRACAGLAAVQQGKEVHCQYVRRCGWRDVIVESALVNLYAK-CGCIDFARRVFTQM 408

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R++I+W SM+ G+ + G   E+L++F  M+  GV+P+  +    + ACS    +  GR
Sbjct: 409 PVRNLITWNSMICGFAQNGGGAEALRIFDRMIKEGVKPDYISFIGVLFACSHAGLVDQGR 468


>ref|XP_008775328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Phoenix dactylifera]
          Length = 641

 Score =  221 bits (563), Expect = 2e-55
 Identities = 108/183 (59%), Positives = 139/183 (75%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           +S+IL  C+          LNS  P  +  KP +YA+LLQ C  S+SF+ GLQ+HS V+K
Sbjct: 28  RSEILRLCESGSLSQALSLLNSADPDRLPPKPILYAALLQACTTSSSFSQGLQLHSRVLK 87

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           SGLD DRFVGNSLLS YFK+ P+FS TR VF++L ++DVISWTSMVSGY+R G+P ESL 
Sbjct: 88  SGLDNDRFVGNSLLSFYFKVSPDFSLTRRVFESLPLKDVISWTSMVSGYIRAGRPTESLL 147

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
           +F +M   G+EPN FTLSAAIKACS+L+ ++ G CFH +VL+R F+ N+VIASAL+DMYG
Sbjct: 148 MFGKMQAFGIEPNAFTLSAAIKACSDLKDIKIGSCFHAMVLLRGFDLNHVIASALVDMYG 207

Query: 17  RNF 9
           +NF
Sbjct: 208 KNF 210



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 43/132 (32%), Positives = 72/132 (54%)
 Frame = -1

Query: 407 GLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYV 228
           G + H+  I SGL  +  V +S + MY K C    E+R VFD +  ++ +SW +++ GY 
Sbjct: 283 GREAHAKFITSGLGGNVVVESSTVDMYAK-CGLMEESRKVFDRMPTKNAVSWCALLGGYC 341

Query: 227 RVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYV 48
           + G  +  L  FREM     E N ++    ++AC+ L A+R G+  H   L     ++ V
Sbjct: 342 QSGDYETVLAQFREM---DTEENHYSFGTILRACAGLSAVRQGKQVHCRFLRTGGWTDVV 398

Query: 47  IASALIDMYGRN 12
           + SAL+D+Y ++
Sbjct: 399 VESALVDLYAKS 410



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 30/122 (24%), Positives = 64/122 (52%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C   ++   G Q+H   +++G   D  V ++L+ +Y K          VF  +
Sbjct: 365 FGTILRACAGLSAVRQGKQVHCRFLRTGGWTDVVVESALVDLYAK-SGLIDYAYRVFTKI 423

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R++I+W +M+ G+ + G+ +E+++LF EM+     P+  +    + ACS    +  GR
Sbjct: 424 SVRNLITWNAMICGFAQNGQGREAIRLFNEMVREWTRPDYISFVGVLFACSHTGLVEEGR 483

Query: 95  CF 90
            +
Sbjct: 484 SY 485


>ref|XP_004248468.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g03540 [Solanum lycopersicum]
          Length = 729

 Score =  215 bits (548), Expect = 1e-53
 Identities = 104/183 (56%), Positives = 138/183 (75%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           +S+I++ C+          L ST  + IS KP +YA+L+QTC +S SF HG+Q H+HVIK
Sbjct: 24  ESEIIHLCRSDLLSQAIKLLKST--EKISSKPIVYATLIQTCTKSHSFNHGVQFHTHVIK 81

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           +G++ DRFVGNSLL++YFKL  NF ETR  FD +  +DV++W+SM++GYVR+GKPK SL+
Sbjct: 82  TGIETDRFVGNSLLALYFKLGSNFLETRRFFDGMVYKDVVAWSSMITGYVRIGKPKISLE 141

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
           L+ EM+D G EPNGFTLSA IKACS++  L+ G  FHGVV+ R FE N VI SALIDMYG
Sbjct: 142 LYGEMIDLGFEPNGFTLSAVIKACSDIGKLKLGSGFHGVVISRGFEENNVIVSALIDMYG 201

Query: 17  RNF 9
           +N+
Sbjct: 202 KNY 204



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 37/148 (25%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +   G ++H   ++ G   D  V ++L+ +Y K C   +   ++F  +
Sbjct: 357 FGTVLRACAGLAALKSGKEVHCQYLRRGGWSDVIVESALVDLYAK-CGFDNYAYVIFRQM 415

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R+ ++W SM+SG+ + GK  E++ +F+EM+  GV+P+  +  A + ACS    +  GR
Sbjct: 416 NVRNSVTWNSMISGFAQNGKGAEAIAVFKEMISEGVKPDYISFIAVLFACSHNGMVDEGR 475

Query: 95  CFH-GVVLVRRFESNYVIASALIDMYGR 15
            ++  ++     +++    S ++D+ GR
Sbjct: 476 KYYLSMINEYGIKAHIEHYSCMVDLLGR 503



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 42/147 (28%), Positives = 80/147 (54%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + S+L     S     G ++H+ ++ +G   +  V +SL+ MY K C     ++ VFD +
Sbjct: 260 FGSVLTALGNSGRTRQGREVHAKIVTAGHCGNVIVDSSLVDMYAK-CGLVDVSQRVFDGM 318

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             R+ +SW +++ GY + G+    ++LFR M     E + ++    ++AC+ L AL++G+
Sbjct: 319 DKRNSVSWCALMGGYCQKGEFDIVIELFRTM----GEVDLYSFGTVLRACAGLAALKSGK 374

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   L R   S+ ++ SAL+D+Y +
Sbjct: 375 EVHCQYLRRGGWSDVIVESALVDLYAK 401



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
 Frame = -1

Query: 476 ISIKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFS 303
           +  +PN +  +++++ C        G   H  VI  G + +  + ++L+ MY K   +  
Sbjct: 149 LGFEPNGFTLSAVIKACSDIGKLKLGSGFHGVVISRGFEENNVIVSALIDMYGKNYAS-G 207

Query: 302 ETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREM-LDSGVEPNGFTLSAAIKAC 126
           +   +FD L   D + WTS++S   R    +E+L  F  M   +G+ P+ FT  + + A 
Sbjct: 208 DALKLFDELPEPDAVCWTSVISSLTRNELHEEALGFFYTMHRKNGLAPDLFTFGSVLTAL 267

Query: 125 SELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
                 R GR  H  ++      N ++ S+L+DMY +
Sbjct: 268 GNSGRTRQGREVHAKIVTAGHCGNVIVDSSLVDMYAK 304


>emb|CDP14719.1| unnamed protein product [Coffea canephora]
          Length = 640

 Score =  215 bits (547), Expect = 1e-53
 Identities = 104/186 (55%), Positives = 137/186 (73%), Gaps = 3/186 (1%)
 Frame = -1

Query: 554 SKILYFCKXXXXXXXXXXLNSTSPQSISIK---PNIYASLLQTCVQSTSFTHGLQIHSHV 384
           S+I + C+          LN T      +    P +YA+L+Q C + +SF+ GLQ H+HV
Sbjct: 29  SQIFHLCRSGYLSDAIHLLNCTHSDFSKVSSQPPILYATLIQACTKLSSFSQGLQFHAHV 88

Query: 383 IKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKES 204
           IKSGL+ DRFVGNSLL++YFKLCPNF +TR VFD L  +DV+SW+S++SGY+R+GKP  +
Sbjct: 89  IKSGLETDRFVGNSLLALYFKLCPNFRDTRKVFDGLFYKDVVSWSSIISGYIRMGKPGFA 148

Query: 203 LKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDM 24
           + L+ EM+  GVEPNGFTLSA IKAC+EL  LR G+CFHGVV+   F+ N+VIASALIDM
Sbjct: 149 IDLYMEMVGCGVEPNGFTLSAVIKACAELGELRLGKCFHGVVIKCGFQFNHVIASALIDM 208

Query: 23  YGRNFK 6
           YGRN++
Sbjct: 209 YGRNYE 214



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 42/147 (28%), Positives = 82/147 (55%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + SLL          H  Q+H+  I +G   + F+ +SL+ MY K C   +E+++VFD +
Sbjct: 269 FGSLLTALGNLGWLKHSRQVHAKAIAAGFSGNVFIESSLVDMYAK-CGLVNESQLVFDRM 327

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             ++ +SW +++ GY ++G  ++ ++L+R M     E + ++    ++AC+ L A+R G+
Sbjct: 328 IEKNAVSWCALLGGYCQMGDFEKVVELYRHM----EEVDLYSFGTVLRACAGLAAVRPGK 383

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   L R    + ++ SAL+D+Y +
Sbjct: 384 EVHCQYLRRGGWRDVIVESALVDLYAK 410



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKL-CPNFSETRMVFDN 279
           + ++L+ C    +   G ++H   ++ G   D  V ++L+ +Y K  C +F+    +F  
Sbjct: 366 FGTVLRACAGLAAVRPGKEVHCQYLRRGGWRDVIVESALVDLYAKCGCVDFA--LRIFSQ 423

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           + +R++I+W SM+SG+ + GK  E++K+F EM+  GV+P+  +  + + ACS    L  G
Sbjct: 424 MPVRNLITWNSMISGFAQNGKGAEAIKMFNEMIKLGVKPDRISFVSVLFACSHSGLLDQG 483

Query: 98  RCFHGVVLVRRFESNYVIA------SALIDMYGR 15
           R +         + NY I       S ++D+ GR
Sbjct: 484 RQYFA-----SMKDNYGIKAEISHYSCMVDLLGR 512



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFS-- 303
           ++PN +  +++++ C +      G   H  VIK G  ++  + ++L+ MY +   N+   
Sbjct: 160 VEPNGFTLSAVIKACAELGELRLGKCFHGVVIKCGFQFNHVIASALIDMYGR---NYEPG 216

Query: 302 ETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREM-LDSGVEPNGFTLSAAIKAC 126
           ++R +FD L   D I WTS++S Y R    +++   F  M    G+  +GFT  + + A 
Sbjct: 217 DSRKLFDELIEPDAICWTSVISAYTRNDLFEKAFGFFYRMHRKGGLFADGFTFGSLLTAL 276

Query: 125 SELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
             L  L+  R  H   +   F  N  I S+L+DMY +
Sbjct: 277 GNLGWLKHSRQVHAKAIAAGFSGNVFIESSLVDMYAK 313


>ref|XP_010921976.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Elaeis guineensis]
          Length = 606

 Score =  214 bits (546), Expect = 2e-53
 Identities = 107/182 (58%), Positives = 135/182 (74%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           +SKIL+ CK          L S  P  +  KP +YA++LQ C  S+S   GLQ+HS+V+K
Sbjct: 28  RSKILHLCKSGFLSQALSLLKSAEPGRLPPKPILYAAVLQACTTSSSLPRGLQLHSYVLK 87

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           SGLD DRFVGNSLLS YFK+ P+FS T  VF++L ++DVISWTSMVSGYVR G+P ESL 
Sbjct: 88  SGLDNDRFVGNSLLSFYFKVSPDFSLTHRVFESLPLKDVISWTSMVSGYVRAGRPTESLL 147

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
           +F +M   GVEPN FTLSAAIKACS+L+ ++ G CFHG+VL+R F+ N VIA AL+DMYG
Sbjct: 148 MFAKMQAFGVEPNAFTLSAAIKACSDLKDVKIGSCFHGMVLLRGFDLNDVIAGALVDMYG 207

Query: 17  RN 12
           +N
Sbjct: 208 KN 209



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 43/132 (32%), Positives = 71/132 (53%)
 Frame = -1

Query: 407 GLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYV 228
           G + H+  I SGL  +  V +S + MY K C    E+R VFD +  ++ +SW +++ GY 
Sbjct: 283 GREAHAKFITSGLGGNVVVESSTVDMYAK-CGLMEESRKVFDRMPTKNAVSWCALLGGYC 341

Query: 227 RVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYV 48
           + G  +  L  FREM     E N ++    ++AC+ L A+R G+  H   L      + V
Sbjct: 342 QSGDYETVLAQFREM---DTEDNHYSFGTILRACAGLSAVRQGKEVHCRFLRTGGWRDVV 398

Query: 47  IASALIDMYGRN 12
           + SAL+D+Y ++
Sbjct: 399 VESALVDLYAKS 410



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
 Frame = -1

Query: 482 QSISIKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPN 309
           Q+  ++PN +  ++ ++ C        G   H  V+  G D +  +  +L+ MY K    
Sbjct: 153 QAFGVEPNAFTLSAAIKACSDLKDVKIGSCFHGMVLLRGFDLNDVIAGALVDMYGKNSA- 211

Query: 308 FSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREML--DSGVEPNGFTLSAAI 135
             +   VF  +   D I WTSM+S   R  + +E++ LF  M+    G+ P+ FT    +
Sbjct: 212 LEDAWHVFHEMIEPDTICWTSMISACTRNDRFEEAVGLFHLMMRRKLGLFPDEFTFGTIM 271

Query: 134 KACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
            A   L   R GR  H   +      N V+ S+ +DMY +
Sbjct: 272 TALGNLHRARQGREAHAKFITSGLGGNVVVESSTVDMYAK 311



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 31/120 (25%), Positives = 64/120 (53%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C   ++   G ++H   +++G   D  V ++L+ +Y K          VF  +
Sbjct: 365 FGTILRACAGLSAVRQGKEVHCRFLRTGGWRDVVVESALVDLYAK-SGLIDYAYGVFTKI 423

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R++I+W +M+ G+ + G+ +E++KLF +ML  G  P+  +    + ACS    +  GR
Sbjct: 424 YMRNLITWNAMICGFAQNGQGREAIKLFNDMLREGARPDYISFIGVLFACSHAGLVEEGR 483


>ref|XP_010556824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           isoform X1 [Tarenaya hassleriana]
           gi|729414754|ref|XP_010556825.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03540
           isoform X2 [Tarenaya hassleriana]
          Length = 604

 Score =  213 bits (541), Expect = 6e-53
 Identities = 105/182 (57%), Positives = 136/182 (74%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           Q++IL FCK          LNST    IS KPN+YASLLQTC + +SF HGLQIH+HV+K
Sbjct: 23  QARILEFCKSGLLTEAIRVLNSTDSNEISPKPNLYASLLQTCTKVSSFGHGLQIHAHVVK 82

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           SGL+ DRFVGNSLL++YFKL P+ ++TR VFD +  +D ISW+SMVS YV+ G+  ++L+
Sbjct: 83  SGLETDRFVGNSLLALYFKLGPDSTDTRRVFDGMFFKDAISWSSMVSRYVKCGEHAKALE 142

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
            F EMLD G+EPN +TLS+A+ ACSE   +R GRCFHG+V+ R FE N+VI+S+L  MYG
Sbjct: 143 TFVEMLDFGLEPNAYTLSSAVVACSETGDVRLGRCFHGIVVTRGFEWNHVISSSLAVMYG 202

Query: 17  RN 12
            N
Sbjct: 203 GN 204



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSG-LDYDRFVGNSLLSMYFKLCPNFSETRMVFDN 279
           + +LL  C        G +IH  V  SG L  +  V +SLL MY K C    E R VFD 
Sbjct: 261 FGTLLMACGNLGRIRQGREIHGKVTTSGMLCGNVVVQSSLLDMYGK-CGFVKEARRVFDG 319

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           +  ++ +SW++++ GY + G+ +  +++FREM     E + +     ++AC+ L A+R G
Sbjct: 320 MSEKNSVSWSALLGGYCQNGEHRMVIEMFREM----EEKDLYCFGTVLRACAGLAAVRHG 375

Query: 98  RCFHGVVLVRRFESNYVIASALIDMYGRN 12
           +  H   + R    N ++ SAL+D+Y ++
Sbjct: 376 KEVHCQYIRRGGYKNVIVESALVDVYAKS 404



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
 Frame = -1

Query: 470 IKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSET 297
           ++PN Y  +S +  C ++     G   H  V+  G +++  + +SL  MY        + 
Sbjct: 152 LEPNAYTLSSAVVACSETGDVRLGRCFHGIVVTRGFEWNHVISSSLAVMYGGNGEP-RDA 210

Query: 296 RMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREM-LDSGVEPNGFTLSAAIKACSE 120
           R VFD +   D I WTS+VS Y +    +E+++ F  M    G+ P+G+T    + AC  
Sbjct: 211 RRVFDEMPEPDAICWTSVVSSYTKNDMYEEAVEFFYVMHRRKGLAPDGYTFGTLLMACGN 270

Query: 119 LEALRTGRCFHGVVLVR-RFESNYVIASALIDMYGR 15
           L  +R GR  HG V        N V+ S+L+DMYG+
Sbjct: 271 LGRIRQGREIHGKVTTSGMLCGNVVVQSSLLDMYGK 306



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 37/149 (24%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKL-CPNFSETRMVFDN 279
           + ++L+ C    +  HG ++H   I+ G   +  V ++L+ +Y K  C +F+    VF  
Sbjct: 359 FGTVLRACAGLAAVRHGKEVHCQYIRRGGYKNVIVESALVDVYAKSGCDDFA--LRVFSK 416

Query: 278 LCIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTG 99
           + +R++I+W +M+ G  + G+ +E++  F  M+  G+EP+  +    + AC     +  G
Sbjct: 417 MSVRNLITWNTMLDGLSKNGRGEEAVMFFEVMVKEGIEPDYISFVGVLSACKHTGLVEEG 476

Query: 98  RCFHGVVLVR-RFESNYVIASALIDMYGR 15
           R +  ++  + R +    I   +ID+ GR
Sbjct: 477 RKYFALMADKYRIKPTAEIYGCMIDILGR 505


>ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Solanum tuberosum]
          Length = 597

 Score =  212 bits (540), Expect = 8e-53
 Identities = 103/183 (56%), Positives = 137/183 (74%)
 Frame = -1

Query: 557 QSKILYFCKXXXXXXXXXXLNSTSPQSISIKPNIYASLLQTCVQSTSFTHGLQIHSHVIK 378
           +S+I++ C+          L +T  + IS KP +YA+L+QTC +S SF HG+Q H+HVIK
Sbjct: 24  ESEIIHLCRSGLLSQAIKLLKTT--EKISSKPIVYATLIQTCTKSHSFNHGVQFHTHVIK 81

Query: 377 SGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLK 198
           +GL+ DRFVGNSLL++YFKL   F ETR  F+ +  +DV++W+SM++GYVR+GKPK SL+
Sbjct: 82  TGLETDRFVGNSLLALYFKLGSKFLETRRFFEGMVYKDVVAWSSMITGYVRIGKPKISLE 141

Query: 197 LFREMLDSGVEPNGFTLSAAIKACSELEALRTGRCFHGVVLVRRFESNYVIASALIDMYG 18
           L+ EM+D G EPNGFTLSA IKACSE+  L+ G  FHGVV+ R FE N VI SALIDMYG
Sbjct: 142 LYGEMIDLGFEPNGFTLSAVIKACSEIGKLKLGSGFHGVVISRGFEENNVIVSALIDMYG 201

Query: 17  RNF 9
           +N+
Sbjct: 202 KNY 204



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 44/147 (29%), Positives = 82/147 (55%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + S+L     S     G ++H+ ++ +GL  +  V +SL+ MY K C    E++ VFD +
Sbjct: 260 FGSVLTALGNSGRTRQGREVHAKIVTAGLCGNVVVDSSLVDMYAK-CGVVDESQHVFDRM 318

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
             R+ +SW +++ GY + G+    ++LFR M     E + ++    ++AC+ L AL++G+
Sbjct: 319 DKRNSVSWCALMGGYCQKGEFDIVIELFRTM----GEVDLYSFGTVLRACAGLAALKSGK 374

Query: 95  CFHGVVLVRRFESNYVIASALIDMYGR 15
             H   L R   S+ ++ SAL+D+Y +
Sbjct: 375 EVHCQYLRRGGWSDVIVESALVDLYAK 401



 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 37/148 (25%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
 Frame = -1

Query: 455 YASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFSETRMVFDNL 276
           + ++L+ C    +   G ++H   ++ G   D  V ++L+ +Y K C   +   ++F  +
Sbjct: 357 FGTVLRACAGLAALKSGKEVHCQYLRRGGWSDVIVESALVDLYAK-CGFDNYAYVIFRQM 415

Query: 275 CIRDVISWTSMVSGYVRVGKPKESLKLFREMLDSGVEPNGFTLSAAIKACSELEALRTGR 96
            +R+ ++W SM+SG+ + GK  E++ +F EM+  GV+P+  +  A + ACS    +  GR
Sbjct: 416 NVRNSVTWNSMISGFAQNGKGAEAIAVFEEMISEGVKPDYISFIAVLFACSHSGMVDEGR 475

Query: 95  CFH-GVVLVRRFESNYVIASALIDMYGR 15
            ++  ++     +++    S ++D+ GR
Sbjct: 476 KYYLSMINEYGIKAHIEHYSCMVDLLGR 503



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
 Frame = -1

Query: 476 ISIKPNIY--ASLLQTCVQSTSFTHGLQIHSHVIKSGLDYDRFVGNSLLSMYFKLCPNFS 303
           +  +PN +  +++++ C +      G   H  VI  G + +  + ++L+ MY K   +  
Sbjct: 149 LGFEPNGFTLSAVIKACSEIGKLKLGSGFHGVVISRGFEENNVIVSALIDMYGKNYAS-G 207

Query: 302 ETRMVFDNLCIRDVISWTSMVSGYVRVGKPKESLKLFREM-LDSGVEPNGFTLSAAIKAC 126
           +   +FD L   D + WTS++S   R    +E+L  F  M   +G+ P+ FT  + + A 
Sbjct: 208 DALKLFDELPEPDAVCWTSVISALTRNELHEEALGFFYTMHRKNGLAPDLFTFGSVLTAL 267

Query: 125 SELEALRTGRCFHGVVLVRRFESNYVIASALIDMYGR 15
                 R GR  H  ++      N V+ S+L+DMY +
Sbjct: 268 GNSGRTRQGREVHAKIVTAGLCGNVVVDSSLVDMYAK 304