BLASTX nr result

ID: Cinnamomum24_contig00020246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00020246
         (986 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]   102   4e-19
ref|YP_009049781.1| hypothetical protein (mitochondrion) [Capsic...   101   1e-18
emb|CDY70488.1| BnaUnng03880D, partial [Brassica napus]                93   3e-16
emb|CDY71657.1| BnaUnng04520D, partial [Brassica napus]                93   3e-16
ref|NP_178797.2| 60S ribosomal protein L2-like protein [Arabidop...    92   8e-16
gb|ERM96663.1| hypothetical protein AMTR_s00001p00272560 [Ambore...    83   1e-15
emb|CDY46990.1| BnaC09g14140D [Brassica napus]                         89   5e-15
ref|XP_006401951.1| hypothetical protein EUTSA_v10013769mg [Eutr...    88   9e-15
ref|XP_009386524.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    86   3e-14

>emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]
          Length = 325

 Score =  102 bits (255), Expect = 4e-19
 Identities = 57/69 (82%), Positives = 59/69 (85%), Gaps = 7/69 (10%)
 Frame = -2

Query: 745 MKGGITGRLQEAKLRRLDKSLIECRLLSE------VQ*GG-EAKLSEL*LADHYISRWRR 587
           MKGGITGRLQEAKLRRLDKSLIECRLLSE      ++ GG EAKLSEL  ADHYISRWRR
Sbjct: 231 MKGGITGRLQEAKLRRLDKSLIECRLLSEDFELSLIREGGREAKLSELYKADHYISRWRR 290

Query: 586 KLFELPFIR 560
           KLFELPFIR
Sbjct: 291 KLFELPFIR 299


>ref|YP_009049781.1| hypothetical protein (mitochondrion) [Capsicum annuum]
           gi|667751792|gb|AIG89879.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667752053|gb|AIG90139.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
          Length = 103

 Score =  101 bits (251), Expect = 1e-18
 Identities = 58/80 (72%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
 Frame = +2

Query: 491 MPMGAGFFEKARADSETWDLGLATNEGKLEELSPPAAYVVVGQLKLAKLRFPPLLNFT** 670
           MPMGAGFFEKARADSETWDLGL  NEGKL ELSPPAAYVVVG +KLAK RFP  L FT  
Sbjct: 1   MPMGAGFFEKARADSETWDLGLVMNEGKLFELSPPAAYVVVGLIKLAKPRFP--LPFTYV 58

Query: 671 SAFYKR-----LVESTKLCF 715
               +R     L ESTKLCF
Sbjct: 59  VENSRRHSISDLTESTKLCF 78


>emb|CDY70488.1| BnaUnng03880D, partial [Brassica napus]
          Length = 134

 Score = 93.2 bits (230), Expect = 3e-16
 Identities = 49/73 (67%), Positives = 50/73 (68%), Gaps = 17/73 (23%)
 Frame = +2

Query: 401 REVKWQGKAIRPXX-----------------GNAHEAPAEREGLPGRMPMGAGFFEKARA 529
           RE +  GKAIRP                   GN HEAPAEREGLPGRMPMGAGFFEKARA
Sbjct: 50  REERSNGKAIRPFGSSRSIAHIQISYLIGERGNTHEAPAEREGLPGRMPMGAGFFEKARA 109

Query: 530 DSETWDLGLATNE 568
           DSETWDLGLATNE
Sbjct: 110 DSETWDLGLATNE 122


>emb|CDY71657.1| BnaUnng04520D, partial [Brassica napus]
          Length = 281

 Score = 93.2 bits (230), Expect = 3e-16
 Identities = 49/73 (67%), Positives = 50/73 (68%), Gaps = 17/73 (23%)
 Frame = +2

Query: 401 REVKWQGKAIRPXX-----------------GNAHEAPAEREGLPGRMPMGAGFFEKARA 529
           RE +  GKAIRP                   GN HEAPAEREGLPGRMPMGAGFFEKARA
Sbjct: 197 REERSNGKAIRPFGSSRSIAHIQISYLIGERGNTHEAPAEREGLPGRMPMGAGFFEKARA 256

Query: 530 DSETWDLGLATNE 568
           DSETWDLGLATNE
Sbjct: 257 DSETWDLGLATNE 269


>ref|NP_178797.2| 60S ribosomal protein L2-like protein [Arabidopsis thaliana]
           gi|330251006|gb|AEC06100.1| 60S ribosomal protein L2
           [Arabidopsis thaliana]
          Length = 389

 Score = 91.7 bits (226), Expect = 8e-16
 Identities = 48/73 (65%), Positives = 49/73 (67%), Gaps = 17/73 (23%)
 Frame = +2

Query: 401 REVKWQGKAIRPXX-----------------GNAHEAPAEREGLPGRMPMGAGFFEKARA 529
           RE +  GKAIRP                   GN HEAP EREGLPGRMPMGAGFFEKARA
Sbjct: 305 REERSNGKAIRPFGSSRSIAHIQISYLIGERGNTHEAPTEREGLPGRMPMGAGFFEKARA 364

Query: 530 DSETWDLGLATNE 568
           DSETWDLGLATNE
Sbjct: 365 DSETWDLGLATNE 377


>gb|ERM96663.1| hypothetical protein AMTR_s00001p00272560 [Amborella trichopoda]
          Length = 62

 Score = 83.2 bits (204), Expect(2) = 1e-15
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +2

Query: 497 MGAGFFEKARADSETWDLGLATNEGKLEELSPPAAYVVVGQLKLAKLRFPPL 652
           M AGFFEK RADSET DL +ATNEG+L+ELSPPAAY VVG +K+AKLR PPL
Sbjct: 1   MSAGFFEKVRADSETRDLSIATNEGQLKELSPPAAYYVVGLIKVAKLRLPPL 52



 Score = 28.9 bits (63), Expect(2) = 1e-15
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 640 LPPLTELHLVVGIL 681
           LPPLT LHLVVGIL
Sbjct: 49  LPPLTGLHLVVGIL 62


>emb|CDY46990.1| BnaC09g14140D [Brassica napus]
          Length = 319

 Score = 89.0 bits (219), Expect = 5e-15
 Identities = 47/73 (64%), Positives = 48/73 (65%), Gaps = 17/73 (23%)
 Frame = +2

Query: 401 REVKWQGKAIRPXX-----------------GNAHEAPAEREGLPGRMPMGAGFFEKARA 529
           RE +  GKAIRP                   GN HEAPAEREGLPGRMPMGAGFFEK  A
Sbjct: 235 REERSNGKAIRPFGSSRSIAHIQISYLIGERGNTHEAPAEREGLPGRMPMGAGFFEKTGA 294

Query: 530 DSETWDLGLATNE 568
           DSETWDLGLATNE
Sbjct: 295 DSETWDLGLATNE 307


>ref|XP_006401951.1| hypothetical protein EUTSA_v10013769mg [Eutrema salsugineum]
           gi|557103041|gb|ESQ43404.1| hypothetical protein
           EUTSA_v10013769mg [Eutrema salsugineum]
          Length = 389

 Score = 88.2 bits (217), Expect = 9e-15
 Identities = 47/72 (65%), Positives = 48/72 (66%), Gaps = 17/72 (23%)
 Frame = +2

Query: 404 EVKWQGKAIRPXX-----------------GNAHEAPAEREGLPGRMPMGAGFFEKARAD 532
           E +  GKAIRP                   GN HEAPAEREGL GRMPMGAGFFEKARAD
Sbjct: 306 EERSNGKAIRPFGSSRSIAHIQISYLIGERGNTHEAPAEREGLQGRMPMGAGFFEKARAD 365

Query: 533 SETWDLGLATNE 568
           SETWDLGLATNE
Sbjct: 366 SETWDLGLATNE 377


>ref|XP_009386524.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
           mitochondrial [Musa acuminata subsp. malaccensis]
          Length = 378

 Score = 85.5 bits (210), Expect(2) = 3e-14
 Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
 Frame = +2

Query: 227 TLEEQKARGIAG*TNVNECKLRCPNTIGADHTRCYRGSKRGQAVTIERLSLSI------- 385
           +L +Q+  G+      NE K +     G+   +      + +A  ++R  +S+       
Sbjct: 248 SLRQQERLGLVEAAEHNESKPKTDQ--GSLQAKPIGEGMKDRACKVDRAPVSLQGSKAIS 305

Query: 386 PSHTGREVKWQGKAIRPXXGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATN 565
           P  + R +      +    GNAHEAPAEREGLPGRM MGAGFFEKARADSET DLGLATN
Sbjct: 306 PCGSSRSIAHIQXHLIGERGNAHEAPAEREGLPGRMRMGAGFFEKARADSETXDLGLATN 365

Query: 566 EG 571
           +G
Sbjct: 366 DG 367



 Score = 21.2 bits (43), Expect(2) = 3e-14
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +3

Query: 570 GSSKSFLRQRLM 605
           GS KSFL QRLM
Sbjct: 367 GSYKSFLCQRLM 378


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